Protein–RNA interactions for Protein: Q9CXK8

Nip7, 60S ribosome subunit biogenesis protein NIP7 homolog, mousemouse

Known RBP Predictions only

Length 180 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nip7Q9CXK8 Chit1-203ENSMUST00000160060 1580 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Nip7Q9CXK8 Pex2-204ENSMUST00000165309 2038 ntAPPRIS P1 TSL 5 BASIC14.79□□□□□ -0.04
Nip7Q9CXK8 Prr36-201ENSMUST00000168386 4616 ntAPPRIS P1 TSL 5 BASIC14.79□□□□□ -0.04
Nip7Q9CXK8 Smyd1-205ENSMUST00000173297 947 ntTSL 5 BASIC14.79□□□□□ -0.04
Nip7Q9CXK8 Pfdn6-202ENSMUST00000173363 871 ntTSL 2 BASIC14.79□□□□□ -0.04
Nip7Q9CXK8 4933438K21Rik-201ENSMUST00000175787 1693 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Nip7Q9CXK8 4930405N21Rik-201ENSMUST00000199950 1200 ntBASIC14.79□□□□□ -0.04
Nip7Q9CXK8 Fxyd4-202ENSMUST00000203066 522 ntTSL 3 BASIC14.79□□□□□ -0.04
Nip7Q9CXK8 Smg8-201ENSMUST00000020801 3218 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Nip7Q9CXK8 5530401A14Rik-201ENSMUST00000021044 1836 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Nip7Q9CXK8 Gm11149-203ENSMUST00000215465 805 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Nip7Q9CXK8 Gm9139-201ENSMUST00000218817 700 ntBASIC14.79□□□□□ -0.04
Nip7Q9CXK8 Gm3619-201ENSMUST00000219947 775 ntBASIC14.79□□□□□ -0.04
Nip7Q9CXK8 Gm36423-202ENSMUST00000222215 1298 ntTSL 5 BASIC14.79□□□□□ -0.04
Nip7Q9CXK8 Cd200r1-201ENSMUST00000057488 1892 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Nip7Q9CXK8 C2cd4c-201ENSMUST00000059699 6729 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Nip7Q9CXK8 Nfatc2-202ENSMUST00000074618 6637 ntAPPRIS P3 TSL 1 (best) BASIC14.79□□□□□ -0.04
Nip7Q9CXK8 Oc90-202ENSMUST00000079776 1670 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
Nip7Q9CXK8 H3f3a-201ENSMUST00000081026 888 ntAPPRIS ALT1 TSL 5 BASIC14.79□□□□□ -0.04
Nip7Q9CXK8 Plcg1-203ENSMUST00000109462 5107 ntAPPRIS P1 TSL 5 BASIC14.79□□□□□ -0.04
Nip7Q9CXK8 Sv2a-201ENSMUST00000035371 4334 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Nip7Q9CXK8 Tmem200a-201ENSMUST00000066049 4115 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Nip7Q9CXK8 9330162012Rik-201ENSMUST00000154919 3836 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Nip7Q9CXK8 Kcnc1-203ENSMUST00000160433 3156 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Nip7Q9CXK8 Stau1-204ENSMUST00000109238 2976 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
Nip7Q9CXK8 Dph3-202ENSMUST00000067955 2953 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Nip7Q9CXK8 Stau1-203ENSMUST00000109236 2860 ntAPPRIS P3 TSL 1 (best) BASIC14.79□□□□□ -0.04
Nip7Q9CXK8 Tcf4-254ENSMUST00000202674 2615 ntTSL 5 BASIC14.79□□□□□ -0.04
Nip7Q9CXK8 Ntrk2-209ENSMUST00000225950 2640 ntBASIC14.79□□□□□ -0.04
Nip7Q9CXK8 Cd34-201ENSMUST00000016638 2454 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Nip7Q9CXK8 Mmp19-203ENSMUST00000219404 2236 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
Nip7Q9CXK8 Zfhx2os-202ENSMUST00000183750 4375 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Nip7Q9CXK8 Crhr2-208ENSMUST00000212633 2041 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Nip7Q9CXK8 Fcrl1-201ENSMUST00000072480 1980 ntAPPRIS P3 TSL 1 (best) BASIC14.78□□□□□ -0.04
Nip7Q9CXK8 Uba6-202ENSMUST00000113373 3504 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
Nip7Q9CXK8 Slc10a3-204ENSMUST00000114147 1708 ntAPPRIS ALT2 TSL 5 BASIC14.78□□□□□ -0.04
Nip7Q9CXK8 Gm14132-201ENSMUST00000117188 1719 ntBASIC14.78□□□□□ -0.04
Nip7Q9CXK8 Spdye4a-203ENSMUST00000195900 1496 ntAPPRIS ALT2 TSL 5 BASIC14.78□□□□□ -0.04
Nip7Q9CXK8 4930520O04Rik-202ENSMUST00000131898 2660 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Nip7Q9CXK8 Pcdhb1-201ENSMUST00000052366 2588 ntAPPRIS P1 BASIC14.78□□□□□ -0.04
Nip7Q9CXK8 Tcea3-201ENSMUST00000102533 1251 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Nip7Q9CXK8 Gm25766-201ENSMUST00000104101 131 ntBASIC14.78□□□□□ -0.04
Nip7Q9CXK8 Ifna2-201ENSMUST00000105147 1032 ntAPPRIS P1 BASIC14.78□□□□□ -0.04
Nip7Q9CXK8 Gm15615-201ENSMUST00000118876 198 ntBASIC14.78□□□□□ -0.04
Nip7Q9CXK8 Gm15507-201ENSMUST00000133523 592 ntTSL 5 BASIC14.78□□□□□ -0.04
Nip7Q9CXK8 1700122E12Rik-202ENSMUST00000147538 479 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Nip7Q9CXK8 Cdpf1-205ENSMUST00000150995 566 ntAPPRIS P1 TSL 3 BASIC14.78□□□□□ -0.04
Nip7Q9CXK8 Gzmc-201ENSMUST00000015585 894 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Nip7Q9CXK8 4930405O22Rik-201ENSMUST00000164605 954 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Nip7Q9CXK8 Gm22877-201ENSMUST00000175451 105 ntBASIC14.78□□□□□ -0.04
Nip7Q9CXK8 Rpl19-201ENSMUST00000017548 751 ntAPPRIS P3 TSL 1 (best) BASIC14.78□□□□□ -0.04
Nip7Q9CXK8 Gm10807-201ENSMUST00000177134 795 ntBASIC14.78□□□□□ -0.04
Nip7Q9CXK8 Rbp2-202ENSMUST00000187905 611 ntAPPRIS P1 TSL 3 BASIC14.78□□□□□ -0.04
Nip7Q9CXK8 Gm37800-202ENSMUST00000193667 553 ntTSL 3 BASIC14.78□□□□□ -0.04
Nip7Q9CXK8 D8Ertd738e-201ENSMUST00000019506 616 ntAPPRIS P1 TSL 2 BASIC14.78□□□□□ -0.04
Nip7Q9CXK8 2310074N15Rik-201ENSMUST00000198276 582 ntBASIC14.78□□□□□ -0.04
Nip7Q9CXK8 Gm35625-201ENSMUST00000210416 316 ntTSL 3 BASIC14.78□□□□□ -0.04
Nip7Q9CXK8 Gm23105-201ENSMUST00000083719 134 ntBASIC14.78□□□□□ -0.04
Nip7Q9CXK8 Rpl19-202ENSMUST00000092425 737 ntAPPRIS ALT1 TSL 3 BASIC14.78□□□□□ -0.04
Nip7Q9CXK8 Aff4-201ENSMUST00000060945 10099 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Nip7Q9CXK8 Hipk3-201ENSMUST00000028600 7454 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Nip7Q9CXK8 Samd11-202ENSMUST00000217934 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
Nip7Q9CXK8 Gm38385-201ENSMUST00000194454 2351 ntBASIC14.78□□□□□ -0.04
Nip7Q9CXK8 Sidt1-201ENSMUST00000047446 4279 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
Nip7Q9CXK8 Fancc-201ENSMUST00000073029 3165 ntAPPRIS P3 TSL 1 (best) BASIC14.78□□□□□ -0.04
Nip7Q9CXK8 Plce1-204ENSMUST00000182481 8357 ntAPPRIS P2 TSL 5 BASIC14.78□□□□□ -0.04
Nip7Q9CXK8 Ncam2-201ENSMUST00000037785 4893 ntAPPRIS P3 TSL 1 (best) BASIC14.78□□□□□ -0.04
Nip7Q9CXK8 Cecr2-202ENSMUST00000112686 9212 ntAPPRIS P2 TSL 5 BASIC14.77□□□□□ -0.04
Nip7Q9CXK8 Ccdc15-204ENSMUST00000216042 1669 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.04
Nip7Q9CXK8 Klf11-201ENSMUST00000020982 4086 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Nip7Q9CXK8 Nat8f6-202ENSMUST00000174143 1571 ntAPPRIS P1 TSL 3 BASIC14.77□□□□□ -0.04
Nip7Q9CXK8 Nelfcd-202ENSMUST00000109075 2279 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Nip7Q9CXK8 Nelfcd-201ENSMUST00000016397 2280 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
Nip7Q9CXK8 Cipc-208ENSMUST00000189246 1454 ntAPPRIS P2 TSL 2 BASIC14.77□□□□□ -0.04
Nip7Q9CXK8 Ppp1r12b-201ENSMUST00000045665 8840 ntAPPRIS ALT2 TSL 5 BASIC14.77□□□□□ -0.04
Nip7Q9CXK8 Twistnb-201ENSMUST00000020877 4325 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Nip7Q9CXK8 Ttyh1-202ENSMUST00000079415 2882 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
Nip7Q9CXK8 Atg4c-203ENSMUST00000180278 2792 ntAPPRIS P1 TSL 5 BASIC14.77□□□□□ -0.04
Nip7Q9CXK8 Gm28578-201ENSMUST00000187727 2698 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
Nip7Q9CXK8 Gm6655-201ENSMUST00000201932 1309 ntBASIC14.77□□□□□ -0.04
Nip7Q9CXK8 Gm8522-201ENSMUST00000118416 1929 ntBASIC14.77□□□□□ -0.04
Nip7Q9CXK8 Reep2-201ENSMUST00000043484 1926 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Nip7Q9CXK8 Gm10479-201ENSMUST00000101568 318 ntAPPRIS P1 TSL 5 BASIC14.77□□□□□ -0.05
Nip7Q9CXK8 Gm11244-201ENSMUST00000121243 237 ntBASIC14.77□□□□□ -0.05
Nip7Q9CXK8 Gm14397-201ENSMUST00000124728 576 ntTSL 3 BASIC14.77□□□□□ -0.05
Nip7Q9CXK8 9430093N23Rik-201ENSMUST00000152494 515 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
Nip7Q9CXK8 Mir6407-201ENSMUST00000184510 101 ntBASIC14.77□□□□□ -0.05
Nip7Q9CXK8 Kdm4dl-201ENSMUST00000184843 1187 ntBASIC14.77□□□□□ -0.05
Nip7Q9CXK8 Nras-208ENSMUST00000200069 831 ntAPPRIS P1 TSL 2 BASIC14.77□□□□□ -0.05
Nip7Q9CXK8 Gm5298-201ENSMUST00000201122 892 ntBASIC14.77□□□□□ -0.05
Nip7Q9CXK8 Gm45641-201ENSMUST00000209775 452 ntTSL 5 BASIC14.77□□□□□ -0.05
Nip7Q9CXK8 AC164105.2-201ENSMUST00000215484 524 ntTSL 5 BASIC14.77□□□□□ -0.05
Nip7Q9CXK8 4930596D02Rik-201ENSMUST00000043266 1160 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Nip7Q9CXK8 Brf2-201ENSMUST00000033877 1899 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Nip7Q9CXK8 Adora1-201ENSMUST00000038191 3625 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Nip7Q9CXK8 C030034I22Rik-202ENSMUST00000188481 4231 ntBASIC14.77□□□□□ -0.05
Nip7Q9CXK8 Nin-204ENSMUST00000169074 6636 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.05
Nip7Q9CXK8 Astl-201ENSMUST00000059839 2377 ntAPPRIS P3 TSL 1 (best) BASIC14.77□□□□□ -0.05
Nip7Q9CXK8 Mob1a-201ENSMUST00000038658 4119 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
Nip7Q9CXK8 Sema4a-202ENSMUST00000107531 2897 ntTSL 5 BASIC14.77□□□□□ -0.05
Retrieved 100 of 76,532 protein–RNA pairs in 41.7 ms