Protein–RNA interactions for Protein: Q9CQ71

Rpa3, Replication protein A 14 kDa subunit, mousemouse

Predictions only

Length 121 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpa3Q9CQ71 Crry-ps-201ENSMUST00000079090 1309 ntBASIC12.62□□□□□ -0.39
Rpa3Q9CQ71 Ildr1-201ENSMUST00000023617 3042 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Rpa3Q9CQ71 Wars-201ENSMUST00000109848 2831 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Rpa3Q9CQ71 Fads1-201ENSMUST00000010807 3456 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Rpa3Q9CQ71 AC129931.1-201ENSMUST00000228865 1861 ntBASIC12.61□□□□□ -0.39
Rpa3Q9CQ71 Wasf2-202ENSMUST00000105912 2236 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Rpa3Q9CQ71 Tmem41b-202ENSMUST00000118429 2774 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Rpa3Q9CQ71 3110062M04Rik-203ENSMUST00000115007 3326 ntAPPRIS P3 TSL 1 (best) BASIC12.61□□□□□ -0.39
Rpa3Q9CQ71 Rspry1-201ENSMUST00000060389 3852 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Rpa3Q9CQ71 Scamp5-201ENSMUST00000046587 3225 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Rpa3Q9CQ71 H2-Q1-201ENSMUST00000073208 2024 ntAPPRIS P2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Rpa3Q9CQ71 Pabpc4-202ENSMUST00000080178 3019 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Rpa3Q9CQ71 Slc44a2-201ENSMUST00000034697 3456 ntAPPRIS P2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Rpa3Q9CQ71 Rbm3-202ENSMUST00000115615 1183 ntAPPRIS ALT1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Rpa3Q9CQ71 Rbm3-203ENSMUST00000115616 1225 ntAPPRIS P3 TSL 1 (best) BASIC12.61□□□□□ -0.39
Rpa3Q9CQ71 Gm15172-201ENSMUST00000118945 1046 ntBASIC12.61□□□□□ -0.39
Rpa3Q9CQ71 Eef1akmt2-202ENSMUST00000120425 573 ntTSL 3 BASIC12.61□□□□□ -0.39
Rpa3Q9CQ71 Tnfrsf18-203ENSMUST00000122001 1078 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Rpa3Q9CQ71 Cmtm1-201ENSMUST00000159039 1130 ntAPPRIS P2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Rpa3Q9CQ71 Rhoc-204ENSMUST00000176347 583 ntTSL 5 BASIC12.61□□□□□ -0.39
Rpa3Q9CQ71 Gm27239-201ENSMUST00000184638 642 ntTSL 3 BASIC12.61□□□□□ -0.39
Rpa3Q9CQ71 Gm29615-201ENSMUST00000185371 697 ntBASIC12.61□□□□□ -0.39
Rpa3Q9CQ71 Gm28262-201ENSMUST00000185463 477 ntTSL 5 BASIC12.61□□□□□ -0.39
Rpa3Q9CQ71 Gm28224-201ENSMUST00000186078 697 ntBASIC12.61□□□□□ -0.39
Rpa3Q9CQ71 Gm29001-201ENSMUST00000186177 697 ntBASIC12.61□□□□□ -0.39
Rpa3Q9CQ71 Gm28292-201ENSMUST00000186593 697 ntBASIC12.61□□□□□ -0.39
Rpa3Q9CQ71 Gm28101-201ENSMUST00000187608 697 ntBASIC12.61□□□□□ -0.39
Rpa3Q9CQ71 Gm29076-201ENSMUST00000187689 697 ntBASIC12.61□□□□□ -0.39
Rpa3Q9CQ71 Gm28302-201ENSMUST00000187931 697 ntBASIC12.61□□□□□ -0.39
Rpa3Q9CQ71 Gm28646-201ENSMUST00000188220 697 ntBASIC12.61□□□□□ -0.39
Rpa3Q9CQ71 1700020N18Rik-201ENSMUST00000188956 547 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Rpa3Q9CQ71 Gm28205-201ENSMUST00000189177 697 ntBASIC12.61□□□□□ -0.39
Rpa3Q9CQ71 Gm29032-201ENSMUST00000189797 697 ntBASIC12.61□□□□□ -0.39
Rpa3Q9CQ71 Gm28695-201ENSMUST00000190300 697 ntBASIC12.61□□□□□ -0.39
Rpa3Q9CQ71 Gm37448-201ENSMUST00000192795 697 ntBASIC12.61□□□□□ -0.39
Rpa3Q9CQ71 Gm44262-201ENSMUST00000204969 372 ntBASIC12.61□□□□□ -0.39
Rpa3Q9CQ71 Gm8913-201ENSMUST00000209491 641 ntBASIC12.61□□□□□ -0.39
Rpa3Q9CQ71 Defb22-201ENSMUST00000028966 628 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Rpa3Q9CQ71 Cryga-201ENSMUST00000061497 625 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Rpa3Q9CQ71 Mirt1-203ENSMUST00000181539 2259 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Rpa3Q9CQ71 Abat-201ENSMUST00000065987 4636 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Rpa3Q9CQ71 Spata20-201ENSMUST00000041705 2627 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Rpa3Q9CQ71 Cchcr1-205ENSMUST00000173903 3054 ntAPPRIS ALT2 TSL 5 BASIC12.61□□□□□ -0.39
Rpa3Q9CQ71 Tenm3-206ENSMUST00000190840 8663 ntAPPRIS ALT1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Rpa3Q9CQ71 Dmbt1-201ENSMUST00000084509 6243 ntAPPRIS P3 TSL 1 (best) BASIC12.61□□□□□ -0.39
Rpa3Q9CQ71 Ctnnbl1-201ENSMUST00000029178 2442 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Rpa3Q9CQ71 Synpo-202ENSMUST00000115318 4479 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Rpa3Q9CQ71 Tspan2-201ENSMUST00000029451 4484 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Rpa3Q9CQ71 Tmc4-201ENSMUST00000038743 2310 ntAPPRIS P2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Rpa3Q9CQ71 Pcsk7-209ENSMUST00000216672 3599 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Rpa3Q9CQ71 Kcnj11-205ENSMUST00000211674 3142 ntAPPRIS P1 BASIC12.61□□□□□ -0.39
Rpa3Q9CQ71 AC171277.1-201ENSMUST00000216902 1441 ntBASIC12.61□□□□□ -0.39
Rpa3Q9CQ71 Ncapd2-201ENSMUST00000043848 4629 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Rpa3Q9CQ71 Gm45428-201ENSMUST00000209619 1789 ntBASIC12.61□□□□□ -0.39
Rpa3Q9CQ71 Esco2-201ENSMUST00000022613 2913 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Rpa3Q9CQ71 Kctd18-210ENSMUST00000164963 2114 ntTSL 5 BASIC12.61□□□□□ -0.39
Rpa3Q9CQ71 Tor3a-201ENSMUST00000079625 3285 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Rpa3Q9CQ71 Ccnt1-208ENSMUST00000169707 7397 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Rpa3Q9CQ71 Dolpp1-203ENSMUST00000123202 2294 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Rpa3Q9CQ71 Dolpp1-201ENSMUST00000028209 2251 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Rpa3Q9CQ71 Galc-201ENSMUST00000021390 3832 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Rpa3Q9CQ71 Npr2-202ENSMUST00000107874 3480 ntTSL 5 BASIC12.6□□□□□ -0.39
Rpa3Q9CQ71 Zfp64-201ENSMUST00000087971 2438 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Rpa3Q9CQ71 Atp8a2-202ENSMUST00000131670 1725 ntTSL 2 BASIC12.6□□□□□ -0.39
Rpa3Q9CQ71 Kcnab2-201ENSMUST00000030768 3533 ntAPPRIS ALT1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Rpa3Q9CQ71 AC091458.1-201ENSMUST00000220902 1361 ntBASIC12.6□□□□□ -0.39
Rpa3Q9CQ71 Gramd2-201ENSMUST00000098661 1368 ntAPPRIS P2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Rpa3Q9CQ71 Eif2s1-201ENSMUST00000071230 3405 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Rpa3Q9CQ71 Galnt11-202ENSMUST00000114950 2493 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Rpa3Q9CQ71 Madd-211ENSMUST00000111373 5641 ntAPPRIS ALT2 TSL 5 BASIC12.6□□□□□ -0.39
Rpa3Q9CQ71 Mfsd13b-201ENSMUST00000033166 1883 ntAPPRIS P2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Rpa3Q9CQ71 Trappc8-202ENSMUST00000097658 2703 ntAPPRIS P3 TSL 1 (best) BASIC12.6□□□□□ -0.39
Rpa3Q9CQ71 Fzd4-201ENSMUST00000058755 6720 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Rpa3Q9CQ71 Grm4-202ENSMUST00000118489 2976 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Rpa3Q9CQ71 AA672651-201ENSMUST00000151550 489 ntTSL 2 BASIC12.6□□□□□ -0.39
Rpa3Q9CQ71 Ccdc188-201ENSMUST00000167061 747 ntAPPRIS P1 TSL 5 BASIC12.6□□□□□ -0.39
Rpa3Q9CQ71 Rpl19-201ENSMUST00000017548 751 ntAPPRIS P3 TSL 1 (best) BASIC12.6□□□□□ -0.39
Rpa3Q9CQ71 Gm27246-201ENSMUST00000183611 1240 ntTSL 5 BASIC12.6□□□□□ -0.39
Rpa3Q9CQ71 Gm28511-201ENSMUST00000191594 450 ntTSL 3 BASIC12.6□□□□□ -0.39
Rpa3Q9CQ71 Ighv5-7-201ENSMUST00000192302 244 ntBASIC12.6□□□□□ -0.39
Rpa3Q9CQ71 AY036118-201ENSMUST00000200021 923 ntBASIC12.6□□□□□ -0.39
Rpa3Q9CQ71 C530044C16Rik-202ENSMUST00000205217 1239 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Rpa3Q9CQ71 Erg28-201ENSMUST00000021676 1169 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Rpa3Q9CQ71 Olfr1347-205ENSMUST00000220413 964 ntBASIC12.6□□□□□ -0.39
Rpa3Q9CQ71 Olfr1347-201ENSMUST00000036357 964 ntAPPRIS P1 BASIC12.6□□□□□ -0.39
Rpa3Q9CQ71 Hist1h3a-201ENSMUST00000091701 534 ntAPPRIS P1 BASIC12.6□□□□□ -0.39
Rpa3Q9CQ71 Rpl19-202ENSMUST00000092425 737 ntAPPRIS ALT1 TSL 3 BASIC12.6□□□□□ -0.39
Rpa3Q9CQ71 Zc3hc1-203ENSMUST00000115184 1504 ntTSL 5 BASIC12.6□□□□□ -0.39
Rpa3Q9CQ71 Iqcc-201ENSMUST00000046675 2639 ntAPPRIS P2 TSL 2 BASIC12.6□□□□□ -0.39
Rpa3Q9CQ71 Trim25-203ENSMUST00000107896 5590 ntAPPRIS P2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Rpa3Q9CQ71 Hdac6-201ENSMUST00000033501 4142 ntAPPRIS P1 TSL 5 BASIC12.6□□□□□ -0.39
Rpa3Q9CQ71 Pdxk-201ENSMUST00000041616 5124 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Rpa3Q9CQ71 Asap1-203ENSMUST00000110115 4535 ntAPPRIS ALT2 TSL 5 BASIC12.6□□□□□ -0.39
Rpa3Q9CQ71 4732414G09Rik-201ENSMUST00000156243 2422 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Rpa3Q9CQ71 Rfx1-201ENSMUST00000005600 4172 ntAPPRIS P2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Rpa3Q9CQ71 Gm26857-201ENSMUST00000181580 3347 ntTSL 5 BASIC12.6□□□□□ -0.39
Rpa3Q9CQ71 Rbm12b2-201ENSMUST00000063839 3327 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Rpa3Q9CQ71 Ptcd3-201ENSMUST00000082094 2581 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Rpa3Q9CQ71 Patl1-201ENSMUST00000061618 4221 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Rpa3Q9CQ71 Folr1-203ENSMUST00000106983 1307 ntAPPRIS P1 TSL 5 BASIC12.6□□□□□ -0.39
Retrieved 100 of 76,532 protein–RNA pairs in 40.2 ms