Protein–RNA interactions for Protein: Q99PQ2

Trim11, E3 ubiquitin-protein ligase TRIM11, mousemouse

Predictions only

Length 467 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim11Q99PQ2 Cyp4b1-201ENSMUST00000102707 1892 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Trim11Q99PQ2 Gm15987-201ENSMUST00000141700 2231 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Trim11Q99PQ2 Gm18983-201ENSMUST00000222884 2729 ntBASIC13.59□□□□□ -0.23
Trim11Q99PQ2 Mmp21-202ENSMUST00000122136 1599 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Trim11Q99PQ2 Galnt10-201ENSMUST00000066987 4715 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Trim11Q99PQ2 Vmn1r45-206ENSMUST00000227977 3297 ntAPPRIS P1 BASIC13.59□□□□□ -0.23
Trim11Q99PQ2 4931415C17Rik-202ENSMUST00000131064 2255 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Trim11Q99PQ2 Gm10277-201ENSMUST00000092883 2295 ntAPPRIS P1 BASIC13.59□□□□□ -0.23
Trim11Q99PQ2 AC126444.1-201ENSMUST00000225938 1768 ntBASIC13.59□□□□□ -0.23
Trim11Q99PQ2 Lrp8-203ENSMUST00000106732 2648 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Trim11Q99PQ2 Dixdc1-204ENSMUST00000118707 989 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Trim11Q99PQ2 Gm14441-201ENSMUST00000121960 540 ntBASIC13.59□□□□□ -0.23
Trim11Q99PQ2 Gm20470-201ENSMUST00000174654 331 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Trim11Q99PQ2 2610016A17Rik-202ENSMUST00000186768 689 ntBASIC13.59□□□□□ -0.23
Trim11Q99PQ2 Gm19087-201ENSMUST00000191430 946 ntBASIC13.59□□□□□ -0.23
Trim11Q99PQ2 Polr2i-201ENSMUST00000019882 819 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Trim11Q99PQ2 Gm5565-201ENSMUST00000199463 1162 ntAPPRIS P1 TSL 5 BASIC13.59□□□□□ -0.23
Trim11Q99PQ2 Gm32633-201ENSMUST00000205726 587 ntTSL 3 BASIC13.59□□□□□ -0.23
Trim11Q99PQ2 Gm44632-201ENSMUST00000207245 474 ntTSL 2 BASIC13.59□□□□□ -0.23
Trim11Q99PQ2 CT025678.1-201ENSMUST00000214795 2972 ntBASIC13.59□□□□□ -0.23
Trim11Q99PQ2 CT571245.2-201ENSMUST00000218421 305 ntBASIC13.59□□□□□ -0.23
Trim11Q99PQ2 Cga-201ENSMUST00000029975 687 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Trim11Q99PQ2 Gm3402-201ENSMUST00000036715 981 ntAPPRIS ALT2 TSL 5 BASIC13.59□□□□□ -0.23
Trim11Q99PQ2 Coro6-204ENSMUST00000102493 2804 ntAPPRIS ALT1 TSL 5 BASIC13.59□□□□□ -0.23
Trim11Q99PQ2 Epb41-207ENSMUST00000105975 5235 ntAPPRIS ALT2 TSL 5 BASIC13.59□□□□□ -0.23
Trim11Q99PQ2 Rufy2-203ENSMUST00000122231 2664 ntTSL 5 BASIC13.59□□□□□ -0.23
Trim11Q99PQ2 Ascc1-202ENSMUST00000164083 1473 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Trim11Q99PQ2 Zfp1-201ENSMUST00000077791 1811 ntAPPRIS P3 TSL 1 (best) BASIC13.59□□□□□ -0.23
Trim11Q99PQ2 Fam149a-201ENSMUST00000093526 5469 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Trim11Q99PQ2 Gm43773-201ENSMUST00000198548 2162 ntBASIC13.59□□□□□ -0.23
Trim11Q99PQ2 Hk2-201ENSMUST00000000642 5513 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Trim11Q99PQ2 Camta2-205ENSMUST00000119120 4460 ntAPPRIS ALT2 TSL 1 (best) BASIC13.59□□□□□ -0.23
Trim11Q99PQ2 Mfap3l-203ENSMUST00000161421 4142 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Trim11Q99PQ2 Trim46-202ENSMUST00000090924 2721 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Trim11Q99PQ2 Klhl6-201ENSMUST00000058839 2386 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Trim11Q99PQ2 Clcnkb-201ENSMUST00000006378 2370 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Trim11Q99PQ2 Gcc1-202ENSMUST00000090511 4650 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Trim11Q99PQ2 Adipor2-202ENSMUST00000169744 3489 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Trim11Q99PQ2 Kctd10-202ENSMUST00000102581 3103 ntAPPRIS P3 TSL 1 (best) BASIC13.59□□□□□ -0.23
Trim11Q99PQ2 AC129931.1-201ENSMUST00000228865 1861 ntBASIC13.59□□□□□ -0.23
Trim11Q99PQ2 Pros1-201ENSMUST00000023629 3303 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Trim11Q99PQ2 Ibsp-201ENSMUST00000031246 2068 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Trim11Q99PQ2 Cdc37-201ENSMUST00000019615 7851 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Trim11Q99PQ2 Tollip-201ENSMUST00000001950 3788 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.23
Trim11Q99PQ2 Ctdspl2-201ENSMUST00000036647 5053 ntAPPRIS P3 TSL 1 (best) BASIC13.58□□□□□ -0.23
Trim11Q99PQ2 Lrmp-201ENSMUST00000032396 2319 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.23
Trim11Q99PQ2 Gm37348-201ENSMUST00000193104 1789 ntBASIC13.58□□□□□ -0.23
Trim11Q99PQ2 Tpm1-201ENSMUST00000030185 1797 ntAPPRIS ALT1 TSL 2 BASIC13.58□□□□□ -0.23
Trim11Q99PQ2 Zfp853-203ENSMUST00000212715 3133 ntAPPRIS ALT2 TSL 5 BASIC13.58□□□□□ -0.24
Trim11Q99PQ2 Gm36855-203ENSMUST00000216660 1406 ntTSL 5 BASIC13.58□□□□□ -0.24
Trim11Q99PQ2 Rnf6-201ENSMUST00000067837 2388 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Trim11Q99PQ2 Lrrn1-201ENSMUST00000049285 3700 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Trim11Q99PQ2 Rgs6-211ENSMUST00000191107 1621 ntTSL 5 BASIC13.58□□□□□ -0.24
Trim11Q99PQ2 Mtap-201ENSMUST00000058030 2797 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Trim11Q99PQ2 Pcdhga4-201ENSMUST00000194418 4727 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Trim11Q99PQ2 Lipe-201ENSMUST00000003207 3613 ntAPPRIS P4 TSL 1 (best) BASIC13.58□□□□□ -0.24
Trim11Q99PQ2 Mia-202ENSMUST00000121848 572 ntAPPRIS ALT2 TSL 1 (best) BASIC13.58□□□□□ -0.24
Trim11Q99PQ2 4931428L18Rik-202ENSMUST00000135245 889 ntAPPRIS P5 TSL 1 (best) BASIC13.58□□□□□ -0.24
Trim11Q99PQ2 Lypd1-203ENSMUST00000159529 989 ntTSL 2 BASIC13.58□□□□□ -0.24
Trim11Q99PQ2 Pcgf1-202ENSMUST00000165164 918 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Trim11Q99PQ2 Gm3893-201ENSMUST00000178882 909 ntAPPRIS P1 TSL 5 BASIC13.58□□□□□ -0.24
Trim11Q99PQ2 Rpl36-ps4-201ENSMUST00000179601 354 ntAPPRIS P1 TSL 5 BASIC13.58□□□□□ -0.24
Trim11Q99PQ2 6530403H02Rik-204ENSMUST00000183276 659 ntTSL 3 BASIC13.58□□□□□ -0.24
Trim11Q99PQ2 Gm29054-201ENSMUST00000187589 1185 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
Trim11Q99PQ2 Gm8885-201ENSMUST00000189382 598 ntBASIC13.58□□□□□ -0.24
Trim11Q99PQ2 Gm45598-202ENSMUST00000210719 986 ntBASIC13.58□□□□□ -0.24
Trim11Q99PQ2 Ggps1-204ENSMUST00000221713 667 ntTSL 3 BASIC13.58□□□□□ -0.24
Trim11Q99PQ2 AC144543.1-201ENSMUST00000221840 1064 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
Trim11Q99PQ2 Cts7-204ENSMUST00000225321 1257 ntBASIC13.58□□□□□ -0.24
Trim11Q99PQ2 Rnf7-201ENSMUST00000057500 1232 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Trim11Q99PQ2 Gm6169-201ENSMUST00000071118 1030 ntAPPRIS P1 BASIC13.58□□□□□ -0.24
Trim11Q99PQ2 Fmr1nb-202ENSMUST00000071848 842 ntAPPRIS P3 TSL 1 (best) BASIC13.58□□□□□ -0.24
Trim11Q99PQ2 Srfbp1-201ENSMUST00000025406 1463 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Trim11Q99PQ2 Zfp286-211ENSMUST00000207597 1668 ntTSL 5 BASIC13.58□□□□□ -0.24
Trim11Q99PQ2 Rad51ap1-202ENSMUST00000112221 1871 ntAPPRIS P3 TSL 1 (best) BASIC13.58□□□□□ -0.24
Trim11Q99PQ2 Slc22a4-201ENSMUST00000020586 2263 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Trim11Q99PQ2 Bahcc1-202ENSMUST00000118987 10712 ntAPPRIS ALT2 TSL 1 (best) BASIC13.58□□□□□ -0.24
Trim11Q99PQ2 Sstr2-203ENSMUST00000146390 2143 ntAPPRIS P1 TSL 5 BASIC13.58□□□□□ -0.24
Trim11Q99PQ2 Galnt9-202ENSMUST00000165856 1541 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
Trim11Q99PQ2 Igf1-204ENSMUST00000121161 1344 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
Trim11Q99PQ2 Tfr2-208ENSMUST00000199054 2966 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Trim11Q99PQ2 Flywch1-201ENSMUST00000045517 2798 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Trim11Q99PQ2 Slc35a4-202ENSMUST00000050476 2362 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Trim11Q99PQ2 Cyp8b1-201ENSMUST00000062474 1950 ntAPPRIS P1 BASIC13.58□□□□□ -0.24
Trim11Q99PQ2 Gm4755-201ENSMUST00000181803 2647 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
Trim11Q99PQ2 Brwd1-204ENSMUST00000113829 9843 ntAPPRIS ALT2 TSL 1 (best) BASIC13.58□□□□□ -0.24
Trim11Q99PQ2 Gulp1-203ENSMUST00000160854 1399 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
Trim11Q99PQ2 Gdap2-202ENSMUST00000106997 2014 ntTSL 2 BASIC13.57□□□□□ -0.24
Trim11Q99PQ2 Hars2-201ENSMUST00000019287 2002 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Trim11Q99PQ2 Wif1-201ENSMUST00000020439 2294 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Trim11Q99PQ2 Prkar1a-201ENSMUST00000049527 3359 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Trim11Q99PQ2 Tmeff2-202ENSMUST00000114565 2718 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Trim11Q99PQ2 Arfgap1-201ENSMUST00000029092 2714 ntAPPRIS P3 TSL 1 (best) BASIC13.57□□□□□ -0.24
Trim11Q99PQ2 Pitpnm3-202ENSMUST00000108508 6450 ntAPPRIS ALT2 TSL 1 (best) BASIC13.57□□□□□ -0.24
Trim11Q99PQ2 Epb41l2-204ENSMUST00000217929 3621 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Trim11Q99PQ2 Robo3-201ENSMUST00000034643 4712 ntAPPRIS ALT2 TSL 5 BASIC13.57□□□□□ -0.24
Trim11Q99PQ2 Cntnap1-201ENSMUST00000103109 5440 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Trim11Q99PQ2 Brd3-210ENSMUST00000164296 2791 ntAPPRIS P3 TSL 5 BASIC13.57□□□□□ -0.24
Trim11Q99PQ2 Hk3-203ENSMUST00000126234 3032 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Trim11Q99PQ2 Zfp341-201ENSMUST00000081926 3299 ntAPPRIS P2 TSL 1 (best) BASIC13.57□□□□□ -0.24
Retrieved 100 of 76,532 protein–RNA pairs in 52.8 ms