Protein–RNA interactions for Protein: Q99MT2

Msh4, MutS protein homolog 4, mousemouse

Predictions only

Length 958 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Msh4Q99MT2 Rpl36-ps4-201ENSMUST00000179601 354 ntAPPRIS P1 TSL 5 BASIC11.64□□□□□ -0.55
Msh4Q99MT2 1700020N18Rik-201ENSMUST00000188956 547 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
Msh4Q99MT2 Rpl7a-ps10-201ENSMUST00000190579 798 ntBASIC11.64□□□□□ -0.55
Msh4Q99MT2 Rprl1-202ENSMUST00000198476 238 ntBASIC11.64□□□□□ -0.55
Msh4Q99MT2 Gm31224-201ENSMUST00000212682 513 ntTSL 3 BASIC11.64□□□□□ -0.55
Msh4Q99MT2 CT485787.1-201ENSMUST00000225617 968 ntBASIC11.64□□□□□ -0.55
Msh4Q99MT2 Tmem14a-202ENSMUST00000027065 1168 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Msh4Q99MT2 Klk1b27-201ENSMUST00000079859 889 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Msh4Q99MT2 Rpl7a-ps3-201ENSMUST00000090170 796 ntBASIC11.64□□□□□ -0.55
Msh4Q99MT2 Rpl7a-ps5-201ENSMUST00000095218 807 ntAPPRIS P1 BASIC11.64□□□□□ -0.55
Msh4Q99MT2 Mylip-202ENSMUST00000222178 1954 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
Msh4Q99MT2 Camta2-205ENSMUST00000119120 4460 ntAPPRIS ALT2 TSL 1 (best) BASIC11.64□□□□□ -0.55
Msh4Q99MT2 Sppl2b-211ENSMUST00000220091 3629 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
Msh4Q99MT2 Abcc10-204ENSMUST00000167360 4866 ntAPPRIS ALT2 TSL 1 (best) BASIC11.64□□□□□ -0.55
Msh4Q99MT2 Akt2-201ENSMUST00000051356 2923 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Msh4Q99MT2 Gm26543-201ENSMUST00000180729 2221 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
Msh4Q99MT2 Gpr139-201ENSMUST00000084650 4843 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Msh4Q99MT2 Mfap3l-203ENSMUST00000161421 4142 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
Msh4Q99MT2 Yae1d1-204ENSMUST00000222796 1382 ntTSL 5 BASIC11.64□□□□□ -0.55
Msh4Q99MT2 H2-Q1-201ENSMUST00000073208 2024 ntAPPRIS P2 TSL 1 (best) BASIC11.64□□□□□ -0.55
Msh4Q99MT2 AC154639.1-201ENSMUST00000224393 2849 ntBASIC11.64□□□□□ -0.55
Msh4Q99MT2 Nynrin-201ENSMUST00000100529 6990 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Msh4Q99MT2 4933424N20Rik-201ENSMUST00000200749 1463 ntBASIC11.63□□□□□ -0.55
Msh4Q99MT2 Zyg11a-201ENSMUST00000043793 2289 ntAPPRIS P2 TSL 5 BASIC11.63□□□□□ -0.55
Msh4Q99MT2 Lrrc74b-201ENSMUST00000023442 2135 ntAPPRIS ALT2 TSL 1 (best) BASIC11.63□□□□□ -0.55
Msh4Q99MT2 Mip-201ENSMUST00000026455 2144 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Msh4Q99MT2 Fbn2-201ENSMUST00000025497 10480 ntAPPRIS P1 TSL 5 BASIC11.63□□□□□ -0.55
Msh4Q99MT2 Cul5-201ENSMUST00000034529 3585 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Msh4Q99MT2 Igfbp4-201ENSMUST00000017637 3831 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Msh4Q99MT2 Ldb3-203ENSMUST00000022330 1586 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
Msh4Q99MT2 Igfbp5-201ENSMUST00000027377 6006 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Msh4Q99MT2 Gm3764-205ENSMUST00000181134 2203 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
Msh4Q99MT2 Cacna1s-201ENSMUST00000112064 6251 ntAPPRIS P3 TSL 2 BASIC11.63□□□□□ -0.55
Msh4Q99MT2 Cplx3-201ENSMUST00000045068 2859 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Msh4Q99MT2 Rbms1-201ENSMUST00000028347 4436 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Msh4Q99MT2 Gm35040-201ENSMUST00000206829 5094 ntTSL 2 BASIC11.63□□□□□ -0.55
Msh4Q99MT2 Dlec1-206ENSMUST00000140326 5815 ntAPPRIS ALT2 TSL 5 BASIC11.63□□□□□ -0.55
Msh4Q99MT2 Arhgap20-204ENSMUST00000130405 3881 ntAPPRIS ALT2 TSL 5 BASIC11.63□□□□□ -0.55
Msh4Q99MT2 Coa5-201ENSMUST00000027286 3863 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Msh4Q99MT2 Rgs17-203ENSMUST00000117676 1651 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Msh4Q99MT2 Ctnnbl1-201ENSMUST00000029178 2442 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Msh4Q99MT2 Gm24934-201ENSMUST00000103764 111 ntBASIC11.63□□□□□ -0.55
Msh4Q99MT2 1500011K16Rik-201ENSMUST00000135091 800 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Msh4Q99MT2 Ighv8-4-201ENSMUST00000178949 294 ntAPPRIS P1 BASIC11.63□□□□□ -0.55
Msh4Q99MT2 Gm33474-201ENSMUST00000199486 1231 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
Msh4Q99MT2 4930589O11Rik-201ENSMUST00000200768 920 ntBASIC11.63□□□□□ -0.55
Msh4Q99MT2 Gm45186-201ENSMUST00000206874 478 ntBASIC11.63□□□□□ -0.55
Msh4Q99MT2 Gm45224-201ENSMUST00000208203 414 ntBASIC11.63□□□□□ -0.55
Msh4Q99MT2 Tm2d2-202ENSMUST00000210536 727 ntTSL 3 BASIC11.63□□□□□ -0.55
Msh4Q99MT2 Rassf5-205ENSMUST00000212202 958 ntTSL 5 BASIC11.63□□□□□ -0.55
Msh4Q99MT2 Gm33104-201ENSMUST00000214178 1010 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
Msh4Q99MT2 Gm19605-202ENSMUST00000221514 1084 ntTSL 5 BASIC11.63□□□□□ -0.55
Msh4Q99MT2 Gm9996-201ENSMUST00000070359 913 ntBASIC11.63□□□□□ -0.55
Msh4Q99MT2 Vmn1r197-201ENSMUST00000091734 897 ntAPPRIS P1 BASIC11.63□□□□□ -0.55
Msh4Q99MT2 Pex26-201ENSMUST00000088561 4093 ntAPPRIS P3 TSL 1 (best) BASIC11.63□□□□□ -0.55
Msh4Q99MT2 Lyar-202ENSMUST00000114106 1504 ntAPPRIS P1 TSL 5 BASIC11.63□□□□□ -0.55
Msh4Q99MT2 Zfp568-201ENSMUST00000074322 2016 ntAPPRIS P3 TSL 5 BASIC11.63□□□□□ -0.55
Msh4Q99MT2 Tkfc-201ENSMUST00000037678 2253 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Msh4Q99MT2 P2rx7-203ENSMUST00000100737 4936 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Msh4Q99MT2 Gm28047-201ENSMUST00000184772 1611 ntAPPRIS P1 TSL 2 BASIC11.63□□□□□ -0.55
Msh4Q99MT2 Lamb3-209ENSMUST00000194677 4867 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Msh4Q99MT2 Rnf6-201ENSMUST00000067837 2388 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Msh4Q99MT2 Stxbp6-202ENSMUST00000120531 4209 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Msh4Q99MT2 Onecut1-201ENSMUST00000056006 3957 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Msh4Q99MT2 Gm26584-201ENSMUST00000180551 3216 ntTSL 5 BASIC11.63□□□□□ -0.55
Msh4Q99MT2 Abi1-211ENSMUST00000149719 3303 ntAPPRIS ALT1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Msh4Q99MT2 Cyp2j13-203ENSMUST00000107078 1493 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
Msh4Q99MT2 3110062M04Rik-201ENSMUST00000055097 3681 ntAPPRIS P3 TSL 1 (best) BASIC11.63□□□□□ -0.55
Msh4Q99MT2 Spns3-202ENSMUST00000092940 2080 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Msh4Q99MT2 Maml2-202ENSMUST00000159294 6404 ntAPPRIS P1 TSL 5 BASIC11.62□□□□□ -0.55
Msh4Q99MT2 Fam110a-203ENSMUST00000109864 1591 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Msh4Q99MT2 Krt31-201ENSMUST00000007318 1581 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Msh4Q99MT2 Ppm1l-201ENSMUST00000029355 9417 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Msh4Q99MT2 G630016G05Rik-202ENSMUST00000156095 3398 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Msh4Q99MT2 4833439L19Rik-208ENSMUST00000153065 2502 ntTSL 5 BASIC11.62□□□□□ -0.55
Msh4Q99MT2 Sptbn2-201ENSMUST00000008991 8251 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Msh4Q99MT2 Zfp426-202ENSMUST00000115562 3557 ntAPPRIS P3 TSL 1 (best) BASIC11.62□□□□□ -0.55
Msh4Q99MT2 Gm45902-202ENSMUST00000140494 2390 ntAPPRIS P1 TSL 2 BASIC11.62□□□□□ -0.55
Msh4Q99MT2 Serpina11-201ENSMUST00000074693 1447 ntAPPRIS P3 TSL 1 (best) BASIC11.62□□□□□ -0.55
Msh4Q99MT2 Vdr-201ENSMUST00000023119 4370 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Msh4Q99MT2 Sec16a-202ENSMUST00000114082 8797 ntAPPRIS ALT2 TSL 5 BASIC11.62□□□□□ -0.55
Msh4Q99MT2 Cc2d1a-202ENSMUST00000117424 3262 ntAPPRIS ALT2 TSL 5 BASIC11.62□□□□□ -0.55
Msh4Q99MT2 Clec16a-201ENSMUST00000038145 3730 ntAPPRIS ALT2 TSL 1 (best) BASIC11.62□□□□□ -0.55
Msh4Q99MT2 Eng-202ENSMUST00000113272 3021 ntAPPRIS ALT2 TSL 1 (best) BASIC11.62□□□□□ -0.55
Msh4Q99MT2 Sparc-201ENSMUST00000018737 2300 ntAPPRIS P3 TSL 1 (best) BASIC11.62□□□□□ -0.55
Msh4Q99MT2 Zfp423-201ENSMUST00000052250 4510 ntAPPRIS ALT2 TSL 1 (best) BASIC11.62□□□□□ -0.55
Msh4Q99MT2 Gm13296-201ENSMUST00000117854 997 ntBASIC11.62□□□□□ -0.55
Msh4Q99MT2 Gm12997-201ENSMUST00000120207 640 ntBASIC11.62□□□□□ -0.55
Msh4Q99MT2 Gm14017-201ENSMUST00000121934 386 ntBASIC11.62□□□□□ -0.55
Msh4Q99MT2 Rhoc-204ENSMUST00000176347 583 ntTSL 5 BASIC11.62□□□□□ -0.55
Msh4Q99MT2 Gm44262-201ENSMUST00000204969 372 ntBASIC11.62□□□□□ -0.55
Msh4Q99MT2 1700011B04Rik-203ENSMUST00000220654 1033 ntTSL 5 BASIC11.62□□□□□ -0.55
Msh4Q99MT2 1700011B04Rik-209ENSMUST00000221760 779 ntTSL 5 BASIC11.62□□□□□ -0.55
Msh4Q99MT2 AC163667.3-201ENSMUST00000225774 222 ntBASIC11.62□□□□□ -0.55
Msh4Q99MT2 Mtus2-202ENSMUST00000085554 1009 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Msh4Q99MT2 Clec4b2-201ENSMUST00000088455 1174 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Msh4Q99MT2 Hbs1l-201ENSMUST00000020153 2793 ntAPPRIS ALT2 TSL 1 (best) BASIC11.62□□□□□ -0.55
Msh4Q99MT2 Mtap-201ENSMUST00000058030 2797 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Msh4Q99MT2 Myh6-201ENSMUST00000081857 6113 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Msh4Q99MT2 Myf5-201ENSMUST00000000445 2083 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Retrieved 100 of 76,532 protein–RNA pairs in 130.9 ms