Protein–RNA interactions for Protein: Q99ML9

Rnf111, E3 ubiquitin-protein ligase Arkadia, mousemouse

Predictions only

Length 989 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf111Q99ML9 Kifap3-201ENSMUST00000027877 3946 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Rnf111Q99ML9 Rufy2-203ENSMUST00000122231 2664 ntTSL 5 BASIC11.59□□□□□ -0.55
Rnf111Q99ML9 Usp44-201ENSMUST00000095333 2946 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Rnf111Q99ML9 Fip1l1-204ENSMUST00000113536 4769 ntAPPRIS ALT2 TSL 1 (best) BASIC11.59□□□□□ -0.55
Rnf111Q99ML9 Gm43963-201ENSMUST00000203466 2488 ntBASIC11.59□□□□□ -0.55
Rnf111Q99ML9 Rnf123-218ENSMUST00000178267 4309 ntAPPRIS P3 TSL 5 BASIC11.59□□□□□ -0.55
Rnf111Q99ML9 Slc25a42-202ENSMUST00000110127 3196 ntAPPRIS P1 TSL 5 BASIC11.59□□□□□ -0.55
Rnf111Q99ML9 Bmp3-201ENSMUST00000031278 6548 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Rnf111Q99ML9 Tapbpl-201ENSMUST00000043422 2352 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Rnf111Q99ML9 Actr1a-201ENSMUST00000040270 2742 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Rnf111Q99ML9 Ptgir-202ENSMUST00000144408 3305 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.55
Rnf111Q99ML9 Gm14340-201ENSMUST00000148700 1913 ntTSL 1 (best) BASIC11.58□□□□□ -0.55
Rnf111Q99ML9 Nudt5-205ENSMUST00000179748 1590 ntAPPRIS P1 TSL 5 BASIC11.58□□□□□ -0.55
Rnf111Q99ML9 Rph3a-201ENSMUST00000079204 4150 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Rnf111Q99ML9 Clec16a-201ENSMUST00000038145 3730 ntAPPRIS ALT2 TSL 1 (best) BASIC11.58□□□□□ -0.56
Rnf111Q99ML9 Gm15446-201ENSMUST00000112544 2417 ntAPPRIS P1 TSL 2 BASIC11.58□□□□□ -0.56
Rnf111Q99ML9 Gm20425-201ENSMUST00000166836 3028 ntAPPRIS P1 TSL 5 BASIC11.58□□□□□ -0.56
Rnf111Q99ML9 2810404F17Rik-201ENSMUST00000156615 1704 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
Rnf111Q99ML9 Rmi1-201ENSMUST00000042450 3855 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Rnf111Q99ML9 Limch1-204ENSMUST00000118242 5050 ntAPPRIS ALT2 TSL 5 BASIC11.58□□□□□ -0.56
Rnf111Q99ML9 Allc-202ENSMUST00000110917 1384 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Rnf111Q99ML9 Zfp108-203ENSMUST00000206777 2562 ntAPPRIS P2 TSL 1 (best) BASIC11.58□□□□□ -0.56
Rnf111Q99ML9 Camta2-202ENSMUST00000100933 4383 ntAPPRIS ALT2 TSL 5 BASIC11.58□□□□□ -0.56
Rnf111Q99ML9 Camta2-204ENSMUST00000108545 4377 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
Rnf111Q99ML9 Camta2-206ENSMUST00000120261 4398 ntTSL 5 BASIC11.58□□□□□ -0.56
Rnf111Q99ML9 Gm37580-201ENSMUST00000192408 2800 ntBASIC11.58□□□□□ -0.56
Rnf111Q99ML9 Odf2l-201ENSMUST00000029920 2239 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
Rnf111Q99ML9 Kdm5b-201ENSMUST00000047714 8714 ntAPPRIS P2 TSL 1 (best) BASIC11.58□□□□□ -0.56
Rnf111Q99ML9 Esam-201ENSMUST00000002011 1865 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Rnf111Q99ML9 Gm2606-201ENSMUST00000100754 1002 ntBASIC11.58□□□□□ -0.56
Rnf111Q99ML9 Trav4d-3-201ENSMUST00000103592 331 ntAPPRIS P1 BASIC11.58□□□□□ -0.56
Rnf111Q99ML9 Trav4d-4-201ENSMUST00000103600 354 ntAPPRIS P1 BASIC11.58□□□□□ -0.56
Rnf111Q99ML9 Trav4n-3-201ENSMUST00000103618 331 ntAPPRIS P1 BASIC11.58□□□□□ -0.56
Rnf111Q99ML9 Trav4n-4-201ENSMUST00000103627 354 ntAPPRIS P1 BASIC11.58□□□□□ -0.56
Rnf111Q99ML9 Trav4-3-201ENSMUST00000103655 411 ntAPPRIS P1 BASIC11.58□□□□□ -0.56
Rnf111Q99ML9 Trav4-4-dv10-201ENSMUST00000103663 361 ntAPPRIS P1 BASIC11.58□□□□□ -0.56
Rnf111Q99ML9 Gm25214-201ENSMUST00000104573 129 ntBASIC11.58□□□□□ -0.56
Rnf111Q99ML9 Sgsm1-203ENSMUST00000112324 1102 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
Rnf111Q99ML9 Gm12286-201ENSMUST00000119246 1002 ntBASIC11.58□□□□□ -0.56
Rnf111Q99ML9 Myadml2os-201ENSMUST00000126642 1044 ntTSL 5 BASIC11.58□□□□□ -0.56
Rnf111Q99ML9 Gm5637-201ENSMUST00000153890 1119 ntBASIC11.58□□□□□ -0.56
Rnf111Q99ML9 Gstp1-201ENSMUST00000169613 757 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Rnf111Q99ML9 Gm26973-201ENSMUST00000182105 696 ntTSL 3 BASIC11.58□□□□□ -0.56
Rnf111Q99ML9 Gm29233-201ENSMUST00000190311 281 ntTSL 5 BASIC11.58□□□□□ -0.56
Rnf111Q99ML9 Gm9136-201ENSMUST00000193368 454 ntBASIC11.58□□□□□ -0.56
Rnf111Q99ML9 Gm6334-201ENSMUST00000207083 228 ntBASIC11.58□□□□□ -0.56
Rnf111Q99ML9 Gm45720-201ENSMUST00000211881 484 ntTSL 3 BASIC11.58□□□□□ -0.56
Rnf111Q99ML9 Gm5950-201ENSMUST00000213337 772 ntBASIC11.58□□□□□ -0.56
Rnf111Q99ML9 Gm9368-201ENSMUST00000219348 831 ntBASIC11.58□□□□□ -0.56
Rnf111Q99ML9 Fxyd1-202ENSMUST00000071697 522 ntAPPRIS P1 TSL 3 BASIC11.58□□□□□ -0.56
Rnf111Q99ML9 Olfr569-201ENSMUST00000078191 945 ntAPPRIS P1 BASIC11.58□□□□□ -0.56
Rnf111Q99ML9 Tsga10-202ENSMUST00000088072 3837 ntAPPRIS ALT2 TSL 1 (best) BASIC11.58□□□□□ -0.56
Rnf111Q99ML9 Sprr2a2-202ENSMUST00000090871 722 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Rnf111Q99ML9 Olfr582-201ENSMUST00000098212 960 ntBASIC11.58□□□□□ -0.56
Rnf111Q99ML9 Rtl5-204ENSMUST00000188731 4325 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Rnf111Q99ML9 Mfsd13b-205ENSMUST00000216241 1761 ntAPPRIS ALT2 TSL 5 BASIC11.58□□□□□ -0.56
Rnf111Q99ML9 Hsd3b1-201ENSMUST00000029465 1663 ntAPPRIS P1 TSL 2 BASIC11.58□□□□□ -0.56
Rnf111Q99ML9 Tpx2-201ENSMUST00000028969 3654 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Rnf111Q99ML9 Grin1-208ENSMUST00000114318 3920 ntTSL 5 BASIC11.58□□□□□ -0.56
Rnf111Q99ML9 Dnpep-202ENSMUST00000113605 1571 ntAPPRIS P3 TSL 1 (best) BASIC11.58□□□□□ -0.56
Rnf111Q99ML9 Adcy9-201ENSMUST00000005719 4457 ntAPPRIS P3 TSL 1 (best) BASIC11.58□□□□□ -0.56
Rnf111Q99ML9 Klhdc7b-202ENSMUST00000225666 3951 ntAPPRIS ALT2 BASIC11.58□□□□□ -0.56
Rnf111Q99ML9 Ddx55-202ENSMUST00000111438 2737 ntTSL 2 BASIC11.58□□□□□ -0.56
Rnf111Q99ML9 Anp32e-204ENSMUST00000168106 2890 ntTSL 5 BASIC11.57□□□□□ -0.56
Rnf111Q99ML9 Per1-202ENSMUST00000101004 3507 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
Rnf111Q99ML9 Gm38140-201ENSMUST00000193617 2755 ntBASIC11.57□□□□□ -0.56
Rnf111Q99ML9 A930038B10Rik-202ENSMUST00000181044 3415 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
Rnf111Q99ML9 Pex26-201ENSMUST00000088561 4093 ntAPPRIS P3 TSL 1 (best) BASIC11.57□□□□□ -0.56
Rnf111Q99ML9 Cryz-208ENSMUST00000192462 2505 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Rnf111Q99ML9 Hmga1-203ENSMUST00000117600 1635 ntAPPRIS P3 TSL 1 (best) BASIC11.57□□□□□ -0.56
Rnf111Q99ML9 Zfp398-201ENSMUST00000079881 2906 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Rnf111Q99ML9 Gm42853-201ENSMUST00000201273 1387 ntBASIC11.57□□□□□ -0.56
Rnf111Q99ML9 Gm18222-201ENSMUST00000202416 1387 ntBASIC11.57□□□□□ -0.56
Rnf111Q99ML9 Sirt5-201ENSMUST00000066804 1367 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Rnf111Q99ML9 Gm43321-201ENSMUST00000198897 2409 ntBASIC11.57□□□□□ -0.56
Rnf111Q99ML9 Abcd3-201ENSMUST00000029770 3489 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Rnf111Q99ML9 Timm22-201ENSMUST00000021203 2817 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Rnf111Q99ML9 Sephs1-201ENSMUST00000027973 5319 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Rnf111Q99ML9 Lynx1-201ENSMUST00000023259 4023 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Rnf111Q99ML9 Crybg3-201ENSMUST00000044604 5231 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Rnf111Q99ML9 Grin2b-205ENSMUST00000152012 2461 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
Rnf111Q99ML9 Tbc1d1-202ENSMUST00000101195 5432 ntAPPRIS P3 TSL 1 (best) BASIC11.57□□□□□ -0.56
Rnf111Q99ML9 Sp100-213ENSMUST00000155094 1666 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
Rnf111Q99ML9 Gm36235-201ENSMUST00000223158 1694 ntTSL 5 BASIC11.57□□□□□ -0.56
Rnf111Q99ML9 Gm15501-201ENSMUST00000133910 849 ntTSL 3 BASIC11.57□□□□□ -0.56
Rnf111Q99ML9 Cox16-204ENSMUST00000166723 579 ntTSL 2 BASIC11.57□□□□□ -0.56
Rnf111Q99ML9 C1qtnf2-203ENSMUST00000173002 1147 ntAPPRIS ALT2 TSL 5 BASIC11.57□□□□□ -0.56
Rnf111Q99ML9 Gm2991-201ENSMUST00000173338 480 ntBASIC11.57□□□□□ -0.56
Rnf111Q99ML9 Nat8f7-202ENSMUST00000179613 686 ntAPPRIS P1 BASIC11.57□□□□□ -0.56
Rnf111Q99ML9 Gm26956-201ENSMUST00000182176 986 ntBASIC11.57□□□□□ -0.56
Rnf111Q99ML9 Abhd14b-202ENSMUST00000185347 1200 ntAPPRIS P1 TSL 3 BASIC11.57□□□□□ -0.56
Rnf111Q99ML9 1700065D16Rik-203ENSMUST00000189279 393 ntTSL 2 BASIC11.57□□□□□ -0.56
Rnf111Q99ML9 Gm42937-201ENSMUST00000197360 752 ntBASIC11.57□□□□□ -0.56
Rnf111Q99ML9 Gm44127-201ENSMUST00000203565 291 ntTSL 3 BASIC11.57□□□□□ -0.56
Rnf111Q99ML9 Gm44934-201ENSMUST00000208941 238 ntTSL 5 BASIC11.57□□□□□ -0.56
Rnf111Q99ML9 Ndufb3-201ENSMUST00000027193 763 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Rnf111Q99ML9 1700028J19Rik-201ENSMUST00000037220 1245 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Rnf111Q99ML9 Ccs-201ENSMUST00000037246 1057 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Rnf111Q99ML9 Cd37-202ENSMUST00000098461 1227 ntAPPRIS P3 TSL 1 (best) BASIC11.57□□□□□ -0.56
Rnf111Q99ML9 Ccdc33-202ENSMUST00000098681 1093 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
Retrieved 100 of 76,532 protein–RNA pairs in 36.7 ms