Protein–RNA interactions for Protein: Q99J36

Thumpd1, THUMP domain-containing protein 1, mousemouse

Known RBP Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Thumpd1Q99J36 Trav13n-3-201ENSMUST00000179580 337 ntAPPRIS P1 BASIC10.62□□□□□ -0.71
Thumpd1Q99J36 Gm6114-201ENSMUST00000182472 968 ntBASIC10.62□□□□□ -0.71
Thumpd1Q99J36 Gm27682-201ENSMUST00000183930 110 ntBASIC10.62□□□□□ -0.71
Thumpd1Q99J36 Ccl4-201ENSMUST00000019074 660 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
Thumpd1Q99J36 Gm35986-201ENSMUST00000197370 655 ntTSL 2 BASIC10.62□□□□□ -0.71
Thumpd1Q99J36 Gm20646-202ENSMUST00000199521 660 ntTSL 3 BASIC10.62□□□□□ -0.71
Thumpd1Q99J36 4930504D19Rik-201ENSMUST00000204799 349 ntTSL 1 (best) BASIC10.62□□□□□ -0.71
Thumpd1Q99J36 Olfr5-202ENSMUST00000209866 2980 ntAPPRIS P1 TSL 5 BASIC10.62□□□□□ -0.71
Thumpd1Q99J36 Tomm7-201ENSMUST00000030851 1125 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
Thumpd1Q99J36 Ccs-201ENSMUST00000037246 1057 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
Thumpd1Q99J36 Rps15-201ENSMUST00000062674 572 ntTSL 1 (best) BASIC10.62□□□□□ -0.71
Thumpd1Q99J36 Fkbp2-201ENSMUST00000070878 642 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
Thumpd1Q99J36 n-R5s195-201ENSMUST00000082891 119 ntBASIC10.62□□□□□ -0.71
Thumpd1Q99J36 Mthfd1l-202ENSMUST00000117291 3669 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
Thumpd1Q99J36 Plxna4os1-201ENSMUST00000150314 1977 ntTSL 1 (best) BASIC10.62□□□□□ -0.71
Thumpd1Q99J36 Tshz3-201ENSMUST00000021641 5098 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
Thumpd1Q99J36 D130051D11Rik-201ENSMUST00000189171 6188 ntBASIC10.62□□□□□ -0.71
Thumpd1Q99J36 Slc5a8-201ENSMUST00000020255 5331 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
Thumpd1Q99J36 Pxn-214ENSMUST00000212819 1689 ntTSL 5 BASIC10.62□□□□□ -0.71
Thumpd1Q99J36 Pacsin1-201ENSMUST00000045896 4190 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
Thumpd1Q99J36 Nacc2-202ENSMUST00000114159 6675 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
Thumpd1Q99J36 Hmbs-202ENSMUST00000097558 1534 ntTSL 1 (best) BASIC10.62□□□□□ -0.71
Thumpd1Q99J36 Dnm3-202ENSMUST00000086074 7523 ntAPPRIS ALT2 TSL 5 BASIC10.62□□□□□ -0.71
Thumpd1Q99J36 Tmod2-201ENSMUST00000064433 9884 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
Thumpd1Q99J36 Hs6st2-201ENSMUST00000088172 4318 ntTSL 1 (best) BASIC10.62□□□□□ -0.71
Thumpd1Q99J36 Ces5a-203ENSMUST00000212009 2042 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
Thumpd1Q99J36 Nr4a2-202ENSMUST00000112627 2400 ntTSL 5 BASIC10.62□□□□□ -0.71
Thumpd1Q99J36 Adcy8-201ENSMUST00000023007 6990 ntAPPRIS P2 TSL 1 (best) BASIC10.61□□□□□ -0.71
Thumpd1Q99J36 H2-T10-201ENSMUST00000166442 1481 ntAPPRIS P1 TSL 5 BASIC10.61□□□□□ -0.71
Thumpd1Q99J36 Il6st-201ENSMUST00000070731 5207 ntAPPRIS P2 TSL 5 BASIC10.61□□□□□ -0.71
Thumpd1Q99J36 Ehmt1-203ENSMUST00000102938 4680 ntAPPRIS ALT2 TSL 1 (best) BASIC10.61□□□□□ -0.71
Thumpd1Q99J36 Ddx11-205ENSMUST00000224497 4141 ntAPPRIS ALT2 BASIC10.61□□□□□ -0.71
Thumpd1Q99J36 Vstm2a-202ENSMUST00000109647 1745 ntTSL 1 (best) BASIC10.61□□□□□ -0.71
Thumpd1Q99J36 Vrk1-201ENSMUST00000021539 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC10.61□□□□□ -0.71
Thumpd1Q99J36 4933415J04Rik-201ENSMUST00000195895 1301 ntBASIC10.61□□□□□ -0.71
Thumpd1Q99J36 Myo18a-211ENSMUST00000130627 6202 ntAPPRIS ALT2 TSL 5 BASIC10.61□□□□□ -0.71
Thumpd1Q99J36 Sdc1-201ENSMUST00000020911 3157 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Thumpd1Q99J36 Slc36a1-203ENSMUST00000108872 5264 ntAPPRIS P1 TSL 5 BASIC10.61□□□□□ -0.71
Thumpd1Q99J36 Rbm8a-206ENSMUST00000200647 2620 ntTSL 2 BASIC10.61□□□□□ -0.71
Thumpd1Q99J36 Slc6a1-201ENSMUST00000032454 4302 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Thumpd1Q99J36 Tax1bp1-201ENSMUST00000080723 3285 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Thumpd1Q99J36 Grin1-208ENSMUST00000114318 3920 ntTSL 5 BASIC10.61□□□□□ -0.71
Thumpd1Q99J36 Psmc3-201ENSMUST00000002171 1819 ntTSL 1 (best) BASIC10.61□□□□□ -0.71
Thumpd1Q99J36 Zfyve26-203ENSMUST00000218377 2726 ntTSL 5 BASIC10.61□□□□□ -0.71
Thumpd1Q99J36 6030407O03Rik-201ENSMUST00000189514 2094 ntTSL 1 (best) BASIC10.61□□□□□ -0.71
Thumpd1Q99J36 Gid8-202ENSMUST00000078687 2063 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Thumpd1Q99J36 Pmp2-201ENSMUST00000029034 1408 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Thumpd1Q99J36 Zfp629-202ENSMUST00000084564 5829 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Thumpd1Q99J36 Rasgrp4-208ENSMUST00000161522 3242 ntTSL 5 BASIC10.61□□□□□ -0.71
Thumpd1Q99J36 Pabpc1-201ENSMUST00000001809 2817 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Thumpd1Q99J36 Mbd1-202ENSMUST00000224047 2838 ntAPPRIS P1 BASIC10.61□□□□□ -0.71
Thumpd1Q99J36 F10-201ENSMUST00000033821 1903 ntAPPRIS ALT2 TSL 1 (best) BASIC10.61□□□□□ -0.71
Thumpd1Q99J36 Gpr173-201ENSMUST00000070316 4855 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Thumpd1Q99J36 Abi1-211ENSMUST00000149719 3303 ntAPPRIS ALT1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Thumpd1Q99J36 Lclat1-201ENSMUST00000067545 4467 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Thumpd1Q99J36 Tnfrsf18-202ENSMUST00000103173 1189 ntAPPRIS P4 TSL 1 (best) BASIC10.61□□□□□ -0.71
Thumpd1Q99J36 Styxl1-204ENSMUST00000111163 1276 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Thumpd1Q99J36 Mymx-201ENSMUST00000113529 442 ntAPPRIS ALT2 TSL 2 BASIC10.61□□□□□ -0.71
Thumpd1Q99J36 Gm11591-201ENSMUST00000120063 702 ntBASIC10.61□□□□□ -0.71
Thumpd1Q99J36 Gm1335-201ENSMUST00000121653 386 ntBASIC10.61□□□□□ -0.71
Thumpd1Q99J36 Gm13205-201ENSMUST00000123548 562 ntTSL 3 BASIC10.61□□□□□ -0.71
Thumpd1Q99J36 Srrm3os-201ENSMUST00000131896 1271 ntTSL 1 (best) BASIC10.61□□□□□ -0.71
Thumpd1Q99J36 Gm11592-201ENSMUST00000133160 637 ntTSL 1 (best) BASIC10.61□□□□□ -0.71
Thumpd1Q99J36 Gm16191-202ENSMUST00000148464 484 ntTSL 1 (best) BASIC10.61□□□□□ -0.71
Thumpd1Q99J36 Gm16339-201ENSMUST00000160954 929 ntTSL 5 BASIC10.61□□□□□ -0.71
Thumpd1Q99J36 Gm20661-203ENSMUST00000177368 900 ntAPPRIS P1 TSL 2 BASIC10.61□□□□□ -0.71
Thumpd1Q99J36 AC112680.3-201ENSMUST00000215297 488 ntTSL 3 BASIC10.61□□□□□ -0.71
Thumpd1Q99J36 Gm31793-201ENSMUST00000218557 415 ntTSL 1 (best) BASIC10.61□□□□□ -0.71
Thumpd1Q99J36 AC158523.3-201ENSMUST00000220664 864 ntTSL 5 BASIC10.61□□□□□ -0.71
Thumpd1Q99J36 Gm4935-201ENSMUST00000221316 1198 ntBASIC10.61□□□□□ -0.71
Thumpd1Q99J36 Gp9-201ENSMUST00000032133 881 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Thumpd1Q99J36 Chchd7-201ENSMUST00000041122 672 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Thumpd1Q99J36 Mdk-203ENSMUST00000090602 714 ntAPPRIS P1 TSL 5 BASIC10.61□□□□□ -0.71
Thumpd1Q99J36 Gm6091-201ENSMUST00000098307 165 ntBASIC10.61□□□□□ -0.71
Thumpd1Q99J36 Hdac6-202ENSMUST00000115642 4069 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Thumpd1Q99J36 Dgkh-202ENSMUST00000226342 15261 ntAPPRIS P1 BASIC10.61□□□□□ -0.71
Thumpd1Q99J36 Raph1-204ENSMUST00000140485 10024 ntAPPRIS P2 TSL 5 BASIC10.61□□□□□ -0.71
Thumpd1Q99J36 Slc25a51-202ENSMUST00000116341 4438 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Thumpd1Q99J36 Tnip1-202ENSMUST00000102730 2787 ntAPPRIS ALT2 TSL 1 (best) BASIC10.61□□□□□ -0.71
Thumpd1Q99J36 Ccdc97-201ENSMUST00000002683 3032 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Thumpd1Q99J36 Pcnt-201ENSMUST00000001179 9331 ntAPPRIS P2 TSL 2 BASIC10.61□□□□□ -0.71
Thumpd1Q99J36 Cep97-203ENSMUST00000118500 3389 ntTSL 1 (best) BASIC10.61□□□□□ -0.71
Thumpd1Q99J36 Xpnpep1-211ENSMUST00000183274 2120 ntTSL 1 (best) BASIC10.61□□□□□ -0.71
Thumpd1Q99J36 Pitpnb-204ENSMUST00000200298 2632 ntAPPRIS ALT1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Thumpd1Q99J36 Abhd1-202ENSMUST00000201125 1352 ntTSL 1 (best) BASIC10.61□□□□□ -0.71
Thumpd1Q99J36 Lrrfip2-214ENSMUST00000217117 1363 ntTSL 5 BASIC10.61□□□□□ -0.71
Thumpd1Q99J36 Ebag9-201ENSMUST00000022964 1613 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Thumpd1Q99J36 Kifc5b-201ENSMUST00000078961 2627 ntAPPRIS P1 TSL 5 BASIC10.61□□□□□ -0.71
Thumpd1Q99J36 Svopl-202ENSMUST00000096040 2366 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Thumpd1Q99J36 Tbl2-204ENSMUST00000153183 7488 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Thumpd1Q99J36 Ranbp10-201ENSMUST00000041400 5308 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Thumpd1Q99J36 Gm14137-201ENSMUST00000069711 3067 ntAPPRIS P1 BASIC10.61□□□□□ -0.71
Thumpd1Q99J36 Arg1-201ENSMUST00000020161 1477 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Thumpd1Q99J36 Cyp26b1-202ENSMUST00000168003 4170 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Thumpd1Q99J36 Cyp26b1-201ENSMUST00000077705 4157 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Thumpd1Q99J36 Bach1-201ENSMUST00000026703 5867 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Thumpd1Q99J36 Nr2c1-202ENSMUST00000099343 2413 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
Thumpd1Q99J36 Krt31-201ENSMUST00000007318 1581 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
Thumpd1Q99J36 Tmem161a-201ENSMUST00000002413 3018 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
Thumpd1Q99J36 Armcx4-201ENSMUST00000124226 7996 ntAPPRIS P1 TSL 2 BASIC10.6□□□□□ -0.71
Retrieved 100 of 76,532 protein–RNA pairs in 44.7 ms