Protein–RNA interactions for Protein: Q91XZ4

Pcdhb6, Protocadherin beta-6, mousemouse

Predictions only

Length 772 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb6Q91XZ4 Adm2-201ENSMUST00000066991 1043 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Pcdhb6Q91XZ4 Rps15-202ENSMUST00000068408 500 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Pcdhb6Q91XZ4 Txndc12-201ENSMUST00000030296 1359 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Pcdhb6Q91XZ4 Adgrg5-201ENSMUST00000074570 2802 ntAPPRIS P3 TSL 1 (best) BASIC12.25□□□□□ -0.45
Pcdhb6Q91XZ4 Gm20658-201ENSMUST00000175871 1489 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Pcdhb6Q91XZ4 Arg1-201ENSMUST00000020161 1477 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Pcdhb6Q91XZ4 AC163354.1-205ENSMUST00000223262 1511 ntTSL 5 BASIC12.25□□□□□ -0.45
Pcdhb6Q91XZ4 Erich1-201ENSMUST00000110813 1557 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Pcdhb6Q91XZ4 Plrg1-202ENSMUST00000122128 1608 ntTSL 5 BASIC12.25□□□□□ -0.45
Pcdhb6Q91XZ4 Gm3836-201ENSMUST00000211377 1613 ntBASIC12.25□□□□□ -0.45
Pcdhb6Q91XZ4 Carmil1-201ENSMUST00000072889 4988 ntAPPRIS P3 TSL 1 (best) BASIC12.25□□□□□ -0.45
Pcdhb6Q91XZ4 Fcrl1-203ENSMUST00000167200 1793 ntAPPRIS ALT2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Pcdhb6Q91XZ4 Psmc3-201ENSMUST00000002171 1819 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Pcdhb6Q91XZ4 Ddah1-201ENSMUST00000029845 3764 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Pcdhb6Q91XZ4 Rin3-201ENSMUST00000056950 3892 ntAPPRIS P3 TSL 1 (best) BASIC12.25□□□□□ -0.45
Pcdhb6Q91XZ4 Rgs7bp-201ENSMUST00000063551 7077 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Pcdhb6Q91XZ4 Tnip1-204ENSMUST00000108885 2686 ntAPPRIS ALT2 TSL 1 (best) BASIC12.24□□□□□ -0.45
Pcdhb6Q91XZ4 Trim46-202ENSMUST00000090924 2721 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Pcdhb6Q91XZ4 Cxcr5-202ENSMUST00000179828 2824 ntAPPRIS P1 TSL 5 BASIC12.24□□□□□ -0.45
Pcdhb6Q91XZ4 Cc2d1a-202ENSMUST00000117424 3262 ntAPPRIS ALT2 TSL 5 BASIC12.24□□□□□ -0.45
Pcdhb6Q91XZ4 Dnajc13-201ENSMUST00000035170 8012 ntAPPRIS P1 TSL 5 BASIC12.24□□□□□ -0.45
Pcdhb6Q91XZ4 Arhgef10l-202ENSMUST00000069623 4531 ntAPPRIS ALT2 TSL 1 (best) BASIC12.24□□□□□ -0.45
Pcdhb6Q91XZ4 Nup160-201ENSMUST00000057481 5684 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Pcdhb6Q91XZ4 Myo9b-202ENSMUST00000168839 7102 ntAPPRIS ALT2 TSL 5 BASIC12.24□□□□□ -0.45
Pcdhb6Q91XZ4 Cyp4b1-201ENSMUST00000102707 1892 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Pcdhb6Q91XZ4 Ighv5-4-201ENSMUST00000103444 425 ntAPPRIS P1 BASIC12.24□□□□□ -0.45
Pcdhb6Q91XZ4 Trav13d-4-201ENSMUST00000103607 264 ntAPPRIS P1 BASIC12.24□□□□□ -0.45
Pcdhb6Q91XZ4 Art3-201ENSMUST00000113083 1561 ntAPPRIS P3 TSL 5 BASIC12.24□□□□□ -0.45
Pcdhb6Q91XZ4 Gm6890-201ENSMUST00000114117 776 ntAPPRIS P1 TSL 5 BASIC12.24□□□□□ -0.45
Pcdhb6Q91XZ4 Rhox2g-201ENSMUST00000115169 795 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Pcdhb6Q91XZ4 Psd2-201ENSMUST00000115716 4607 ntAPPRIS P3 TSL 1 (best) BASIC12.24□□□□□ -0.45
Pcdhb6Q91XZ4 Gm13187-202ENSMUST00000133873 1321 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Pcdhb6Q91XZ4 Pcdh1-202ENSMUST00000159405 3880 ntAPPRIS P1 TSL 5 BASIC12.24□□□□□ -0.45
Pcdhb6Q91XZ4 Mff-209ENSMUST00000160972 1358 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Pcdhb6Q91XZ4 Il1rap-206ENSMUST00000174202 2306 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Pcdhb6Q91XZ4 Adtrp-204ENSMUST00000179758 1046 ntAPPRIS ALT2 TSL 5 BASIC12.24□□□□□ -0.45
Pcdhb6Q91XZ4 Trav13-4-dv7-202ENSMUST00000184905 264 ntAPPRIS P1 BASIC12.24□□□□□ -0.45
Pcdhb6Q91XZ4 Gm42629-201ENSMUST00000199063 1102 ntBASIC12.24□□□□□ -0.45
Pcdhb6Q91XZ4 Rasgef1a-202ENSMUST00000203482 2227 ntAPPRIS P3 TSL 1 (best) BASIC12.24□□□□□ -0.45
Pcdhb6Q91XZ4 0610033M10Rik-201ENSMUST00000204546 506 ntTSL 5 BASIC12.24□□□□□ -0.45
Pcdhb6Q91XZ4 Zfp112-204ENSMUST00000215113 2628 ntAPPRIS ALT2 TSL 5 BASIC12.24□□□□□ -0.45
Pcdhb6Q91XZ4 Rsph1-201ENSMUST00000024832 1164 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Pcdhb6Q91XZ4 Mia-201ENSMUST00000071986 566 ntAPPRIS P2 TSL 1 (best) BASIC12.24□□□□□ -0.45
Pcdhb6Q91XZ4 Hrct1-201ENSMUST00000095109 1452 ntAPPRIS P1 BASIC12.24□□□□□ -0.45
Pcdhb6Q91XZ4 Jade2-203ENSMUST00000109091 6099 ntAPPRIS P2 TSL 1 (best) BASIC12.24□□□□□ -0.45
Pcdhb6Q91XZ4 Limch1-204ENSMUST00000118242 5050 ntAPPRIS ALT2 TSL 5 BASIC12.24□□□□□ -0.45
Pcdhb6Q91XZ4 Asrgl1-201ENSMUST00000049948 4195 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Pcdhb6Q91XZ4 Zfp426-202ENSMUST00000115562 3557 ntAPPRIS P3 TSL 1 (best) BASIC12.24□□□□□ -0.45
Pcdhb6Q91XZ4 Tbc1d1-202ENSMUST00000101195 5432 ntAPPRIS P3 TSL 1 (best) BASIC12.24□□□□□ -0.45
Pcdhb6Q91XZ4 Umod-201ENSMUST00000033263 2625 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Pcdhb6Q91XZ4 Cul9-204ENSMUST00000182485 7848 ntAPPRIS P2 TSL 5 BASIC12.24□□□□□ -0.45
Pcdhb6Q91XZ4 Lrmp-201ENSMUST00000032396 2319 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Pcdhb6Q91XZ4 Zfp335-201ENSMUST00000041361 4587 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Pcdhb6Q91XZ4 AC124397.2-201ENSMUST00000225575 2215 ntBASIC12.23□□□□□ -0.45
Pcdhb6Q91XZ4 D030045P18Rik-204ENSMUST00000215085 2186 ntTSL 5 BASIC12.23□□□□□ -0.45
Pcdhb6Q91XZ4 Dgkz-203ENSMUST00000111303 4169 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Pcdhb6Q91XZ4 Ip6k2-201ENSMUST00000085018 1846 ntAPPRIS P2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Pcdhb6Q91XZ4 Tor3a-201ENSMUST00000079625 3285 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Pcdhb6Q91XZ4 Smarcb1-202ENSMUST00000121304 1622 ntAPPRIS ALT1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Pcdhb6Q91XZ4 Lrp1-203ENSMUST00000121829 2887 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Pcdhb6Q91XZ4 Wdr31-201ENSMUST00000030087 1440 ntAPPRIS P3 TSL 1 (best) BASIC12.23□□□□□ -0.45
Pcdhb6Q91XZ4 Arfgap1-201ENSMUST00000029092 2714 ntAPPRIS P3 TSL 1 (best) BASIC12.23□□□□□ -0.45
Pcdhb6Q91XZ4 Abca7-201ENSMUST00000043866 6590 ntAPPRIS P3 TSL 1 (best) BASIC12.23□□□□□ -0.45
Pcdhb6Q91XZ4 Gm11960-201ENSMUST00000122068 925 ntBASIC12.23□□□□□ -0.45
Pcdhb6Q91XZ4 Tmem74bos-201ENSMUST00000137422 390 ntTSL 3 BASIC12.23□□□□□ -0.45
Pcdhb6Q91XZ4 Gm16686-201ENSMUST00000141816 396 ntAPPRIS P1 BASIC12.23□□□□□ -0.45
Pcdhb6Q91XZ4 Cmtm1-201ENSMUST00000159039 1130 ntAPPRIS P2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Pcdhb6Q91XZ4 Tmbim6-206ENSMUST00000161250 1148 ntAPPRIS P1 TSL 5 BASIC12.23□□□□□ -0.45
Pcdhb6Q91XZ4 Bloc1s2-ps-201ENSMUST00000183232 432 ntBASIC12.23□□□□□ -0.45
Pcdhb6Q91XZ4 1110008E08Rik-202ENSMUST00000183621 723 ntBASIC12.23□□□□□ -0.45
Pcdhb6Q91XZ4 Ighv4-2-201ENSMUST00000192975 362 ntBASIC12.23□□□□□ -0.45
Pcdhb6Q91XZ4 Acsm5-207ENSMUST00000207813 1084 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Pcdhb6Q91XZ4 Rad51d-202ENSMUST00000021033 1201 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Pcdhb6Q91XZ4 Defb22-201ENSMUST00000028966 628 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Pcdhb6Q91XZ4 Lyz1-201ENSMUST00000092162 1263 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Pcdhb6Q91XZ4 Asb18-202ENSMUST00000097656 788 ntTSL 5 BASIC12.23□□□□□ -0.45
Pcdhb6Q91XZ4 Kcnma1-213ENSMUST00000188991 3711 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Pcdhb6Q91XZ4 Bmp2-201ENSMUST00000028836 3555 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Pcdhb6Q91XZ4 Tbc1d2-201ENSMUST00000084621 4315 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Pcdhb6Q91XZ4 Slc7a7-201ENSMUST00000000984 2132 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Pcdhb6Q91XZ4 Foxk1-201ENSMUST00000072837 7439 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Pcdhb6Q91XZ4 Ak4-202ENSMUST00000106945 4175 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Pcdhb6Q91XZ4 Acsm1-201ENSMUST00000047929 2083 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Pcdhb6Q91XZ4 Cyp8b1-201ENSMUST00000062474 1950 ntAPPRIS P1 BASIC12.23□□□□□ -0.45
Pcdhb6Q91XZ4 Cbx7-203ENSMUST00000109616 2899 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Pcdhb6Q91XZ4 Gjc1-202ENSMUST00000092567 1890 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Pcdhb6Q91XZ4 Cyth4-201ENSMUST00000043069 2791 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Pcdhb6Q91XZ4 Adamts5-201ENSMUST00000023611 8091 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Pcdhb6Q91XZ4 Camta2-202ENSMUST00000100933 4383 ntAPPRIS ALT2 TSL 5 BASIC12.23□□□□□ -0.45
Pcdhb6Q91XZ4 Abcd3-201ENSMUST00000029770 3489 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Pcdhb6Q91XZ4 Npy5r-202ENSMUST00000211920 1715 ntAPPRIS P1 TSL 5 BASIC12.23□□□□□ -0.45
Pcdhb6Q91XZ4 Patl1-201ENSMUST00000061618 4221 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Pcdhb6Q91XZ4 Lgi4-201ENSMUST00000039775 4037 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Pcdhb6Q91XZ4 Rnf6-201ENSMUST00000067837 2388 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Pcdhb6Q91XZ4 Prdx2-202ENSMUST00000109733 1590 ntAPPRIS P1 TSL 2 BASIC12.22□□□□□ -0.45
Pcdhb6Q91XZ4 Pip5kl1-201ENSMUST00000055304 1577 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Pcdhb6Q91XZ4 Slc22a5-201ENSMUST00000019044 3062 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Pcdhb6Q91XZ4 Gm45776-201ENSMUST00000212366 1522 ntBASIC12.22□□□□□ -0.45
Pcdhb6Q91XZ4 Add2-208ENSMUST00000203786 2289 ntAPPRIS P3 TSL 1 (best) BASIC12.22□□□□□ -0.45
Pcdhb6Q91XZ4 Sfxn3-201ENSMUST00000062213 2966 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Retrieved 100 of 76,532 protein–RNA pairs in 50 ms