Protein–RNA interactions for Protein: Q8K2F3

Depp1, Protein DEPP1, mousemouse

Predictions only

Length 205 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Depp1Q8K2F3 Sephs1-201ENSMUST00000027973 5319 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
Depp1Q8K2F3 Rps13-203ENSMUST00000205490 1317 ntTSL 1 (best) BASIC10.18□□□□□ -0.78
Depp1Q8K2F3 Ces2a-201ENSMUST00000034346 1960 ntAPPRIS P3 TSL 1 (best) BASIC10.18□□□□□ -0.78
Depp1Q8K2F3 Adgrl3-214ENSMUST00000120445 5230 ntTSL 5 BASIC10.18□□□□□ -0.78
Depp1Q8K2F3 Gm2128-201ENSMUST00000108009 2560 ntBASIC10.18□□□□□ -0.78
Depp1Q8K2F3 F10-201ENSMUST00000033821 1903 ntAPPRIS ALT2 TSL 1 (best) BASIC10.18□□□□□ -0.78
Depp1Q8K2F3 Fuom-203ENSMUST00000121115 872 ntTSL 1 (best) BASIC10.18□□□□□ -0.78
Depp1Q8K2F3 1700016P03Rik-201ENSMUST00000134252 863 ntTSL 1 (best) BASIC10.18□□□□□ -0.78
Depp1Q8K2F3 C230066G23Rik-201ENSMUST00000150195 650 ntTSL 1 (best) BASIC10.18□□□□□ -0.78
Depp1Q8K2F3 Pdxk-ps-202ENSMUST00000160550 876 ntBASIC10.18□□□□□ -0.78
Depp1Q8K2F3 Gm35986-201ENSMUST00000197370 655 ntTSL 2 BASIC10.18□□□□□ -0.78
Depp1Q8K2F3 AC166344.1-202ENSMUST00000224139 234 ntBASIC10.18□□□□□ -0.78
Depp1Q8K2F3 Tmem178b-201ENSMUST00000061740 3178 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
Depp1Q8K2F3 Rims4-201ENSMUST00000044734 4962 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
Depp1Q8K2F3 Gm13093-201ENSMUST00000126212 2485 ntTSL 1 (best) BASIC10.18□□□□□ -0.78
Depp1Q8K2F3 Trp63-204ENSMUST00000115305 1729 ntAPPRIS ALT1 TSL 1 (best) BASIC10.18□□□□□ -0.78
Depp1Q8K2F3 4931415C17Rik-202ENSMUST00000131064 2255 ntTSL 1 (best) BASIC10.18□□□□□ -0.78
Depp1Q8K2F3 Akap10-203ENSMUST00000108710 3394 ntTSL 2 BASIC10.18□□□□□ -0.78
Depp1Q8K2F3 Tfdp2-204ENSMUST00000179065 2213 ntTSL 1 (best) BASIC10.18□□□□□ -0.78
Depp1Q8K2F3 Pip4k2c-201ENSMUST00000013970 3307 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
Depp1Q8K2F3 Stim1-209ENSMUST00000211457 2183 ntTSL 5 BASIC10.18□□□□□ -0.78
Depp1Q8K2F3 Gm3836-201ENSMUST00000211377 1613 ntBASIC10.18□□□□□ -0.78
Depp1Q8K2F3 Nek1-208ENSMUST00000211256 4810 ntAPPRIS ALT2 TSL 1 (best) BASIC10.18□□□□□ -0.78
Depp1Q8K2F3 Ttc25-201ENSMUST00000006976 2673 ntAPPRIS ALT2 TSL 1 (best) BASIC10.18□□□□□ -0.78
Depp1Q8K2F3 Npepps-201ENSMUST00000001480 4215 ntAPPRIS P2 TSL 1 (best) BASIC10.18□□□□□ -0.78
Depp1Q8K2F3 Esrp1-204ENSMUST00000108313 3696 ntTSL 5 BASIC10.18□□□□□ -0.78
Depp1Q8K2F3 Aldh1a7-201ENSMUST00000025656 2066 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
Depp1Q8K2F3 Nccrp1-201ENSMUST00000057974 1531 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Depp1Q8K2F3 Ccnt1-208ENSMUST00000169707 7397 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Depp1Q8K2F3 Zfp64-201ENSMUST00000087971 2438 ntTSL 1 (best) BASIC10.17□□□□□ -0.78
Depp1Q8K2F3 Herc4-201ENSMUST00000020258 3898 ntAPPRIS P2 TSL 1 (best) BASIC10.17□□□□□ -0.78
Depp1Q8K2F3 Stxbp5l-201ENSMUST00000023526 3344 ntTSL 1 (best) BASIC10.17□□□□□ -0.78
Depp1Q8K2F3 Sertad2-201ENSMUST00000093292 5647 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Depp1Q8K2F3 Lgals3bp-201ENSMUST00000043722 2330 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Depp1Q8K2F3 Palld-202ENSMUST00000121200 4193 ntTSL 1 (best) BASIC10.17□□□□□ -0.78
Depp1Q8K2F3 Pcdh15-238ENSMUST00000193739 5034 ntAPPRIS ALT2 TSL 5 BASIC10.17□□□□□ -0.78
Depp1Q8K2F3 Ldb3-204ENSMUST00000064098 2299 ntAPPRIS ALT2 TSL 1 (best) BASIC10.17□□□□□ -0.78
Depp1Q8K2F3 Gm10277-201ENSMUST00000092883 2295 ntAPPRIS P1 BASIC10.17□□□□□ -0.78
Depp1Q8K2F3 D130043K22Rik-201ENSMUST00000006893 4973 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Depp1Q8K2F3 Pofut1-201ENSMUST00000049863 5600 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Depp1Q8K2F3 Zfp773-201ENSMUST00000032622 3028 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Depp1Q8K2F3 Als2cl-206ENSMUST00000155014 5150 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Depp1Q8K2F3 Cysltr2-202ENSMUST00000169168 1744 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Depp1Q8K2F3 Gm10604-201ENSMUST00000098260 1706 ntAPPRIS P1 BASIC10.17□□□□□ -0.78
Depp1Q8K2F3 Spata3-202ENSMUST00000113344 1047 ntAPPRIS P3 TSL 1 (best) BASIC10.17□□□□□ -0.78
Depp1Q8K2F3 Gm15370-201ENSMUST00000117158 253 ntBASIC10.17□□□□□ -0.78
Depp1Q8K2F3 Gm5419-201ENSMUST00000119301 527 ntBASIC10.17□□□□□ -0.78
Depp1Q8K2F3 Mdk-ps1-201ENSMUST00000119782 321 ntBASIC10.17□□□□□ -0.78
Depp1Q8K2F3 Gm12298-201ENSMUST00000126999 731 ntTSL 1 (best) BASIC10.17□□□□□ -0.78
Depp1Q8K2F3 Gm8062-201ENSMUST00000139696 444 ntBASIC10.17□□□□□ -0.78
Depp1Q8K2F3 Gm11755-201ENSMUST00000144096 891 ntTSL 1 (best) BASIC10.17□□□□□ -0.78
Depp1Q8K2F3 Fxyd5-212ENSMUST00000162733 2998 ntTSL 1 (best) BASIC10.17□□□□□ -0.78
Depp1Q8K2F3 Gm29396-201ENSMUST00000185659 716 ntBASIC10.17□□□□□ -0.78
Depp1Q8K2F3 Gm43433-201ENSMUST00000196573 481 ntBASIC10.17□□□□□ -0.78
Depp1Q8K2F3 Gm44172-201ENSMUST00000203903 1235 ntTSL 1 (best) BASIC10.17□□□□□ -0.78
Depp1Q8K2F3 Gm6013-201ENSMUST00000212264 699 ntBASIC10.17□□□□□ -0.78
Depp1Q8K2F3 AC166349.1-201ENSMUST00000220866 695 ntBASIC10.17□□□□□ -0.78
Depp1Q8K2F3 Gm46400-201ENSMUST00000222294 724 ntTSL 5 BASIC10.17□□□□□ -0.78
Depp1Q8K2F3 AC154222.2-201ENSMUST00000225848 607 ntBASIC10.17□□□□□ -0.78
Depp1Q8K2F3 4933434E20Rik-202ENSMUST00000029552 1080 ntTSL 1 (best) BASIC10.17□□□□□ -0.78
Depp1Q8K2F3 Rhox2a-201ENSMUST00000063340 795 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Depp1Q8K2F3 Acyp1-202ENSMUST00000065913 448 ntTSL 1 (best) BASIC10.17□□□□□ -0.78
Depp1Q8K2F3 Crispld2-201ENSMUST00000034282 2898 ntAPPRIS ALT2 TSL 1 (best) BASIC10.17□□□□□ -0.78
Depp1Q8K2F3 Eef1d-205ENSMUST00000109972 1624 ntAPPRIS ALT2 TSL 1 (best) BASIC10.17□□□□□ -0.78
Depp1Q8K2F3 Dixdc1-202ENSMUST00000117093 1613 ntTSL 1 (best) BASIC10.17□□□□□ -0.78
Depp1Q8K2F3 4930554G24Rik-201ENSMUST00000126260 1603 ntTSL 1 (best) BASIC10.17□□□□□ -0.78
Depp1Q8K2F3 Vill-202ENSMUST00000074734 2440 ntTSL 1 (best) BASIC10.17□□□□□ -0.78
Depp1Q8K2F3 Gm18986-201ENSMUST00000216029 1986 ntBASIC10.17□□□□□ -0.78
Depp1Q8K2F3 Lamp5-201ENSMUST00000057503 1955 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Depp1Q8K2F3 Trappc11-201ENSMUST00000039061 4332 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Depp1Q8K2F3 Kndc1-201ENSMUST00000053445 7299 ntAPPRIS P1 TSL 5 BASIC10.17□□□□□ -0.78
Depp1Q8K2F3 Camsap3-209ENSMUST00000207970 3817 ntAPPRIS ALT2 TSL 1 (best) BASIC10.17□□□□□ -0.78
Depp1Q8K2F3 Rpap2-205ENSMUST00000112655 2686 ntAPPRIS ALT2 TSL 1 (best) BASIC10.17□□□□□ -0.78
Depp1Q8K2F3 Abi1-209ENSMUST00000140164 3403 ntAPPRIS ALT1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Depp1Q8K2F3 Pacsin1-201ENSMUST00000045896 4190 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Depp1Q8K2F3 Tmx2-203ENSMUST00000111665 2282 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Depp1Q8K2F3 Mtm1-203ENSMUST00000061970 3379 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Depp1Q8K2F3 Map4-205ENSMUST00000165876 5573 ntAPPRIS ALT2 TSL 5 BASIC10.17□□□□□ -0.78
Depp1Q8K2F3 AC131068.2-201ENSMUST00000226175 1453 ntBASIC10.17□□□□□ -0.78
Depp1Q8K2F3 Igbp1b-201ENSMUST00000054786 1456 ntAPPRIS P1 BASIC10.17□□□□□ -0.78
Depp1Q8K2F3 Gm8146-201ENSMUST00000192106 1847 ntBASIC10.17□□□□□ -0.78
Depp1Q8K2F3 Galnt10-201ENSMUST00000066987 4715 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
Depp1Q8K2F3 Slc44a1-204ENSMUST00000107647 2176 ntTSL 2 BASIC10.16□□□□□ -0.78
Depp1Q8K2F3 Gucy2e-203ENSMUST00000108665 3645 ntAPPRIS P1 TSL 5 BASIC10.16□□□□□ -0.78
Depp1Q8K2F3 Cfap52-201ENSMUST00000021287 2199 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
Depp1Q8K2F3 4933431M02Rik-201ENSMUST00000203905 1432 ntTSL 1 (best) BASIC10.16□□□□□ -0.78
Depp1Q8K2F3 Gm43154-214ENSMUST00000211225 1420 ntTSL 5 BASIC10.16□□□□□ -0.78
Depp1Q8K2F3 Mbtps1-201ENSMUST00000081381 4195 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
Depp1Q8K2F3 Bhlha15-201ENSMUST00000060747 3494 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
Depp1Q8K2F3 Irx3os-203ENSMUST00000133528 1354 ntTSL 5 BASIC10.16□□□□□ -0.78
Depp1Q8K2F3 Gm42498-201ENSMUST00000199981 1372 ntBASIC10.16□□□□□ -0.78
Depp1Q8K2F3 Cnpy2-202ENSMUST00000219037 1383 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
Depp1Q8K2F3 Gm13990-201ENSMUST00000151391 2701 ntTSL 5 BASIC10.16□□□□□ -0.78
Depp1Q8K2F3 Pars2-202ENSMUST00000106781 3046 ntAPPRIS ALT2 TSL 1 (best) BASIC10.16□□□□□ -0.78
Depp1Q8K2F3 Snap23-201ENSMUST00000028743 2658 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
Depp1Q8K2F3 AU019823-205ENSMUST00000171462 3339 ntAPPRIS P1 TSL 3 BASIC10.16□□□□□ -0.78
Depp1Q8K2F3 Entpd8-203ENSMUST00000114380 2301 ntAPPRIS P2 TSL 1 (best) BASIC10.16□□□□□ -0.78
Depp1Q8K2F3 Gtf3c4-201ENSMUST00000037117 6941 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
Depp1Q8K2F3 Acsl6-202ENSMUST00000064690 1988 ntTSL 1 (best) BASIC10.16□□□□□ -0.78
Depp1Q8K2F3 Stx5a-213ENSMUST00000176381 2251 ntAPPRIS P2 TSL 1 (best) BASIC10.16□□□□□ -0.78
Retrieved 100 of 76,532 protein–RNA pairs in 54.5 ms