Protein–RNA interactions for Protein: Q8CEG5

Ccdc28b, Coiled-coil domain-containing protein 28B, mousemouse

Predictions only

Length 200 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc28bQ8CEG5 AC125209.1-201ENSMUST00000225812 766 ntBASIC11.8□□□□□ -0.52
Ccdc28bQ8CEG5 Tatdn3-201ENSMUST00000027945 1196 ntAPPRIS ALT2 TSL 3 BASIC11.8□□□□□ -0.52
Ccdc28bQ8CEG5 Gm22058-201ENSMUST00000083393 310 ntBASIC11.8□□□□□ -0.52
Ccdc28bQ8CEG5 Zfp617-201ENSMUST00000119003 2920 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Ccdc28bQ8CEG5 Gm6124-201ENSMUST00000188240 2580 ntBASIC11.8□□□□□ -0.52
Ccdc28bQ8CEG5 Gcnt7-201ENSMUST00000099060 2220 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Ccdc28bQ8CEG5 Acsl6-208ENSMUST00000108899 1662 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Ccdc28bQ8CEG5 Gfi1b-201ENSMUST00000028156 1681 ntAPPRIS P3 TSL 1 (best) BASIC11.8□□□□□ -0.52
Ccdc28bQ8CEG5 Ror2-202ENSMUST00000130235 3730 ntAPPRIS ALT2 TSL 1 (best) BASIC11.8□□□□□ -0.52
Ccdc28bQ8CEG5 Sec14l1-202ENSMUST00000090433 4654 ntAPPRIS ALT2 TSL 1 (best) BASIC11.8□□□□□ -0.52
Ccdc28bQ8CEG5 Dph6-201ENSMUST00000028640 2632 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Ccdc28bQ8CEG5 Mospd2-203ENSMUST00000112248 2487 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Ccdc28bQ8CEG5 Ccdc15-206ENSMUST00000217238 1747 ntAPPRIS ALT2 TSL 1 (best) BASIC11.8□□□□□ -0.52
Ccdc28bQ8CEG5 Ush1c-201ENSMUST00000009667 3072 ntAPPRIS P3 TSL 1 (best) BASIC11.8□□□□□ -0.52
Ccdc28bQ8CEG5 Cc2d1a-202ENSMUST00000117424 3262 ntAPPRIS ALT2 TSL 5 BASIC11.8□□□□□ -0.52
Ccdc28bQ8CEG5 Sirt2-208ENSMUST00000155327 2117 ntAPPRIS ALT2 TSL 5 BASIC11.8□□□□□ -0.52
Ccdc28bQ8CEG5 Cacna1g-210ENSMUST00000107792 7981 ntAPPRIS ALT2 TSL 5 BASIC11.8□□□□□ -0.52
Ccdc28bQ8CEG5 Abca7-203ENSMUST00000171637 6638 ntAPPRIS ALT2 TSL 1 (best) BASIC11.8□□□□□ -0.52
Ccdc28bQ8CEG5 Trpv6-201ENSMUST00000031902 2923 ntAPPRIS ALT2 TSL 1 (best) BASIC11.8□□□□□ -0.52
Ccdc28bQ8CEG5 Cluap1-201ENSMUST00000040881 1779 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Ccdc28bQ8CEG5 Slc1a2-203ENSMUST00000111212 1957 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Ccdc28bQ8CEG5 Plekhb1-205ENSMUST00000107046 2793 ntAPPRIS ALT1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Ccdc28bQ8CEG5 Grik3-201ENSMUST00000030676 8973 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Ccdc28bQ8CEG5 Fam214a-205ENSMUST00000215370 4205 ntAPPRIS ALT2 TSL 5 BASIC11.79□□□□□ -0.52
Ccdc28bQ8CEG5 H3f3a-205ENSMUST00000161308 2841 ntAPPRIS P2 TSL 1 (best) BASIC11.79□□□□□ -0.52
Ccdc28bQ8CEG5 Tmem92-201ENSMUST00000100554 2043 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Ccdc28bQ8CEG5 Hdac6-202ENSMUST00000115642 4069 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Ccdc28bQ8CEG5 Atp9a-201ENSMUST00000029060 3529 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Ccdc28bQ8CEG5 Btbd9-201ENSMUST00000079924 6657 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Ccdc28bQ8CEG5 Erlin2-201ENSMUST00000033873 4838 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Ccdc28bQ8CEG5 Pou6f1-201ENSMUST00000058274 2523 ntTSL 2 BASIC11.79□□□□□ -0.52
Ccdc28bQ8CEG5 Tnfaip8l3-201ENSMUST00000098760 4403 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Ccdc28bQ8CEG5 Arhgef2-207ENSMUST00000175903 3356 ntAPPRIS ALT2 TSL 5 BASIC11.79□□□□□ -0.52
Ccdc28bQ8CEG5 1700037H04Rik-202ENSMUST00000103188 1241 ntAPPRIS P3 TSL 1 (best) BASIC11.79□□□□□ -0.52
Ccdc28bQ8CEG5 Mup-ps23-201ENSMUST00000118063 630 ntBASIC11.79□□□□□ -0.52
Ccdc28bQ8CEG5 Sumo2-204ENSMUST00000118155 884 ntTSL 2 BASIC11.79□□□□□ -0.52
Ccdc28bQ8CEG5 A430060F13Rik-201ENSMUST00000124176 378 ntBASIC11.79□□□□□ -0.52
Ccdc28bQ8CEG5 Ift20-203ENSMUST00000128788 1141 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Ccdc28bQ8CEG5 1110028F11Rik-201ENSMUST00000137077 837 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Ccdc28bQ8CEG5 Gm12395-201ENSMUST00000144765 536 ntTSL 5 BASIC11.79□□□□□ -0.52
Ccdc28bQ8CEG5 1700055C04Rik-201ENSMUST00000176450 355 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Ccdc28bQ8CEG5 Mhrt-201ENSMUST00000181782 828 ntTSL 2 BASIC11.79□□□□□ -0.52
Ccdc28bQ8CEG5 Gm26927-201ENSMUST00000182385 965 ntBASIC11.79□□□□□ -0.52
Ccdc28bQ8CEG5 H2-Bl-209ENSMUST00000194244 862 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Ccdc28bQ8CEG5 Rpl7a-ps2-201ENSMUST00000200554 774 ntBASIC11.79□□□□□ -0.52
Ccdc28bQ8CEG5 Gm45184-201ENSMUST00000206354 955 ntTSL 5 BASIC11.79□□□□□ -0.52
Ccdc28bQ8CEG5 Isca2-201ENSMUST00000021667 883 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Ccdc28bQ8CEG5 Gm5781-201ENSMUST00000219792 443 ntBASIC11.79□□□□□ -0.52
Ccdc28bQ8CEG5 CT030657.3-201ENSMUST00000222707 1200 ntBASIC11.79□□□□□ -0.52
Ccdc28bQ8CEG5 AC125070.1-201ENSMUST00000223523 555 ntTSL 5 BASIC11.79□□□□□ -0.52
Ccdc28bQ8CEG5 Nupr1-201ENSMUST00000032961 829 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Ccdc28bQ8CEG5 Slc1a2-201ENSMUST00000005220 2127 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Ccdc28bQ8CEG5 1500011B03Rik-201ENSMUST00000061251 579 ntAPPRIS P5 TSL 1 (best) BASIC11.79□□□□□ -0.52
Ccdc28bQ8CEG5 Camkmt-201ENSMUST00000095188 972 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Ccdc28bQ8CEG5 S100pbp-203ENSMUST00000106059 4084 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Ccdc28bQ8CEG5 Ckap2-201ENSMUST00000046916 2593 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Ccdc28bQ8CEG5 Bco1-202ENSMUST00000167370 1747 ntAPPRIS ALT2 TSL 5 BASIC11.79□□□□□ -0.52
Ccdc28bQ8CEG5 Mapk8ip3-202ENSMUST00000115228 5424 ntAPPRIS ALT2 TSL 1 (best) BASIC11.79□□□□□ -0.52
Ccdc28bQ8CEG5 Ece1-201ENSMUST00000102518 4816 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Ccdc28bQ8CEG5 Ints1-210ENSMUST00000200393 7070 ntAPPRIS P2 TSL 1 (best) BASIC11.79□□□□□ -0.52
Ccdc28bQ8CEG5 Rsph10b-203ENSMUST00000166847 2878 ntAPPRIS P1 TSL 5 BASIC11.79□□□□□ -0.52
Ccdc28bQ8CEG5 Cplx3-201ENSMUST00000045068 2859 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Ccdc28bQ8CEG5 Il27ra-201ENSMUST00000005601 2664 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Ccdc28bQ8CEG5 Slc39a14-202ENSMUST00000068044 4926 ntAPPRIS P3 TSL 5 BASIC11.79□□□□□ -0.52
Ccdc28bQ8CEG5 Tspan31-201ENSMUST00000060991 1556 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Ccdc28bQ8CEG5 Eps8l2-201ENSMUST00000026577 3191 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Ccdc28bQ8CEG5 Trim35-201ENSMUST00000022623 3678 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Ccdc28bQ8CEG5 Strc-201ENSMUST00000038389 5756 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Ccdc28bQ8CEG5 Csf1-201ENSMUST00000014743 4176 ntAPPRIS P3 TSL 1 (best) BASIC11.79□□□□□ -0.52
Ccdc28bQ8CEG5 Wdr36-201ENSMUST00000053663 3281 ntAPPRIS P4 TSL 1 (best) BASIC11.78□□□□□ -0.52
Ccdc28bQ8CEG5 Nhlh2-201ENSMUST00000066187 3761 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Ccdc28bQ8CEG5 Araf-201ENSMUST00000001155 2358 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Ccdc28bQ8CEG5 Odf2-201ENSMUST00000028128 2376 ntAPPRIS P3 TSL 1 (best) BASIC11.78□□□□□ -0.52
Ccdc28bQ8CEG5 Nrap-203ENSMUST00000095947 5214 ntTSL 5 BASIC11.78□□□□□ -0.52
Ccdc28bQ8CEG5 Asic5-201ENSMUST00000029641 1657 ntAPPRIS P2 TSL 1 (best) BASIC11.78□□□□□ -0.52
Ccdc28bQ8CEG5 Timd4-201ENSMUST00000068877 2173 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Ccdc28bQ8CEG5 Cux1-204ENSMUST00000175975 10945 ntAPPRIS ALT2 TSL 1 (best) BASIC11.78□□□□□ -0.52
Ccdc28bQ8CEG5 Magel2-201ENSMUST00000080403 4631 ntAPPRIS P1 BASIC11.78□□□□□ -0.52
Ccdc28bQ8CEG5 Rnf170-201ENSMUST00000014022 3929 ntAPPRIS P2 TSL 1 (best) BASIC11.78□□□□□ -0.52
Ccdc28bQ8CEG5 Pacrg-201ENSMUST00000041463 1475 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Ccdc28bQ8CEG5 Slc38a5-202ENSMUST00000115590 1983 ntAPPRIS ALT2 TSL 2 BASIC11.78□□□□□ -0.52
Ccdc28bQ8CEG5 Gm19165-201ENSMUST00000204453 1982 ntBASIC11.78□□□□□ -0.52
Ccdc28bQ8CEG5 Ddx56-201ENSMUST00000004507 1956 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Ccdc28bQ8CEG5 Asph-202ENSMUST00000078139 6694 ntAPPRIS P3 TSL 1 (best) BASIC11.78□□□□□ -0.52
Ccdc28bQ8CEG5 Gm10684-201ENSMUST00000098827 2203 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Ccdc28bQ8CEG5 Axl-201ENSMUST00000002677 4265 ntAPPRIS P3 TSL 1 (best) BASIC11.78□□□□□ -0.52
Ccdc28bQ8CEG5 Htr1f-201ENSMUST00000063076 2509 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Ccdc28bQ8CEG5 March7-202ENSMUST00000102747 2271 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Ccdc28bQ8CEG5 Gm13736-201ENSMUST00000119272 253 ntBASIC11.78□□□□□ -0.52
Ccdc28bQ8CEG5 Mrps10-202ENSMUST00000119841 1113 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Ccdc28bQ8CEG5 Pyy-202ENSMUST00000127381 529 ntAPPRIS ALT2 TSL 2 BASIC11.78□□□□□ -0.52
Ccdc28bQ8CEG5 Sumo3-206ENSMUST00000141228 772 ntTSL 3 BASIC11.78□□□□□ -0.52
Ccdc28bQ8CEG5 Cpne8-201ENSMUST00000014777 697 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Ccdc28bQ8CEG5 Gldnos-201ENSMUST00000149237 841 ntTSL 2 BASIC11.78□□□□□ -0.52
Ccdc28bQ8CEG5 Pfdn5-205ENSMUST00000166658 1062 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Ccdc28bQ8CEG5 Cyba-201ENSMUST00000017604 744 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Ccdc28bQ8CEG5 Dnm3os-203ENSMUST00000185878 557 ntTSL 5 BASIC11.78□□□□□ -0.52
Ccdc28bQ8CEG5 C330022C24Rik-201ENSMUST00000190581 1077 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Ccdc28bQ8CEG5 4930589O11Rik-201ENSMUST00000200768 920 ntBASIC11.78□□□□□ -0.52
Ccdc28bQ8CEG5 Gm45384-201ENSMUST00000210451 277 ntBASIC11.78□□□□□ -0.52
Retrieved 100 of 76,532 protein–RNA pairs in 62.6 ms