Protein–RNA interactions for Protein: Q8C190

Vps9d1, VPS9 domain-containing protein 1, mousemouse

Predictions only

Length 649 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps9d1Q8C190 Gm44086-201ENSMUST00000203251 2349 ntBASIC11.19□□□□□ -0.62
Vps9d1Q8C190 Corin-202ENSMUST00000167460 4639 ntAPPRIS ALT2 TSL 1 (best) BASIC11.19□□□□□ -0.62
Vps9d1Q8C190 Zfp46-201ENSMUST00000069195 4639 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Vps9d1Q8C190 Cacna1s-204ENSMUST00000160641 6104 ntAPPRIS ALT2 TSL 5 BASIC11.19□□□□□ -0.62
Vps9d1Q8C190 AC093022.4-203ENSMUST00000228523 2657 ntBASIC11.19□□□□□ -0.62
Vps9d1Q8C190 AC122291.1-201ENSMUST00000228937 5748 ntBASIC11.19□□□□□ -0.62
Vps9d1Q8C190 Gm45776-201ENSMUST00000212366 1522 ntBASIC11.19□□□□□ -0.62
Vps9d1Q8C190 Tardbp-206ENSMUST00000105702 6425 ntTSL 5 BASIC11.19□□□□□ -0.62
Vps9d1Q8C190 Accs-202ENSMUST00000068513 1872 ntAPPRIS P3 TSL 5 BASIC11.19□□□□□ -0.62
Vps9d1Q8C190 Tpcn2-201ENSMUST00000058022 2993 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Vps9d1Q8C190 Bcs1l-203ENSMUST00000113733 1488 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Vps9d1Q8C190 Tcf25-202ENSMUST00000108840 2582 ntAPPRIS ALT2 TSL 1 (best) BASIC11.19□□□□□ -0.62
Vps9d1Q8C190 Mthfd1l-202ENSMUST00000117291 3669 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Vps9d1Q8C190 Phldb2-201ENSMUST00000036355 5483 ntAPPRIS P3 TSL 1 (best) BASIC11.19□□□□□ -0.62
Vps9d1Q8C190 Rps6kb1-202ENSMUST00000058286 3250 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
Vps9d1Q8C190 Phka2-203ENSMUST00000112377 3947 ntAPPRIS P3 TSL 1 (best) BASIC11.18□□□□□ -0.62
Vps9d1Q8C190 Slc2a4-203ENSMUST00000141837 1776 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
Vps9d1Q8C190 Gpc5-203ENSMUST00000176912 2837 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
Vps9d1Q8C190 Nrg1-202ENSMUST00000207417 3138 ntAPPRIS ALT2 TSL 5 BASIC11.18□□□□□ -0.62
Vps9d1Q8C190 Arnt2-213ENSMUST00000209133 6228 ntAPPRIS ALT2 TSL 5 BASIC11.18□□□□□ -0.62
Vps9d1Q8C190 Aldh4a1-201ENSMUST00000039818 3382 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Vps9d1Q8C190 Rasal2-204ENSMUST00000132699 4013 ntAPPRIS ALT2 TSL 5 BASIC11.18□□□□□ -0.62
Vps9d1Q8C190 5830462O15Rik-201ENSMUST00000214603 1655 ntBASIC11.18□□□□□ -0.62
Vps9d1Q8C190 Acsf3-202ENSMUST00000212781 2604 ntAPPRIS ALT2 TSL 2 BASIC11.18□□□□□ -0.62
Vps9d1Q8C190 Rpl3-ps2-201ENSMUST00000117131 1214 ntBASIC11.18□□□□□ -0.62
Vps9d1Q8C190 Gm16302-201ENSMUST00000159268 428 ntTSL 3 BASIC11.18□□□□□ -0.62
Vps9d1Q8C190 H2afz-206ENSMUST00000173790 437 ntTSL 5 BASIC11.18□□□□□ -0.62
Vps9d1Q8C190 Gm6222-202ENSMUST00000182143 629 ntBASIC11.18□□□□□ -0.62
Vps9d1Q8C190 Gm5850-201ENSMUST00000192923 1206 ntBASIC11.18□□□□□ -0.62
Vps9d1Q8C190 Gm43822-201ENSMUST00000200285 476 ntBASIC11.18□□□□□ -0.62
Vps9d1Q8C190 Tmem176b-209ENSMUST00000204073 986 ntAPPRIS P1 TSL 2 BASIC11.18□□□□□ -0.62
Vps9d1Q8C190 Gm3961-201ENSMUST00000204425 994 ntBASIC11.18□□□□□ -0.62
Vps9d1Q8C190 Nanos3-202ENSMUST00000210202 692 ntAPPRIS ALT2 TSL 1 (best) BASIC11.18□□□□□ -0.62
Vps9d1Q8C190 Ppcdc-207ENSMUST00000214339 738 ntTSL 2 BASIC11.18□□□□□ -0.62
Vps9d1Q8C190 Gm39318-201ENSMUST00000214606 1118 ntTSL 3 BASIC11.18□□□□□ -0.62
Vps9d1Q8C190 Ndufb3-201ENSMUST00000027193 763 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Vps9d1Q8C190 Krtap4-7-201ENSMUST00000055121 984 ntAPPRIS P1 BASIC11.18□□□□□ -0.62
Vps9d1Q8C190 Dhx58os-201ENSMUST00000137154 1594 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
Vps9d1Q8C190 Neu2-201ENSMUST00000070898 1570 ntAPPRIS P3 TSL 1 (best) BASIC11.18□□□□□ -0.62
Vps9d1Q8C190 Sept8-204ENSMUST00000121334 2801 ntAPPRIS ALT2 TSL 5 BASIC11.18□□□□□ -0.62
Vps9d1Q8C190 Adgrg5-201ENSMUST00000074570 2802 ntAPPRIS P3 TSL 1 (best) BASIC11.18□□□□□ -0.62
Vps9d1Q8C190 Satb1-208ENSMUST00000144331 6243 ntAPPRIS P2 TSL 1 (best) BASIC11.18□□□□□ -0.62
Vps9d1Q8C190 Gm43447-201ENSMUST00000198471 1535 ntBASIC11.18□□□□□ -0.62
Vps9d1Q8C190 Celsr3-207ENSMUST00000213524 9930 ntAPPRIS ALT2 TSL 1 (best) BASIC11.18□□□□□ -0.62
Vps9d1Q8C190 Samd11-201ENSMUST00000179919 2610 ntAPPRIS P2 TSL 1 (best) BASIC11.18□□□□□ -0.62
Vps9d1Q8C190 Gm36445-201ENSMUST00000209344 1432 ntTSL 5 BASIC11.18□□□□□ -0.62
Vps9d1Q8C190 Ankrd31-203ENSMUST00000208758 5859 ntTSL 5 BASIC11.17□□□□□ -0.62
Vps9d1Q8C190 Gm36235-201ENSMUST00000223158 1694 ntTSL 5 BASIC11.17□□□□□ -0.62
Vps9d1Q8C190 Wapl-202ENSMUST00000090027 4185 ntAPPRIS ALT2 TSL 5 BASIC11.17□□□□□ -0.62
Vps9d1Q8C190 Lcp2-202ENSMUST00000109329 2209 ntAPPRIS ALT2 TSL 1 (best) BASIC11.17□□□□□ -0.62
Vps9d1Q8C190 Nlrp6-203ENSMUST00000183845 4436 ntAPPRIS P2 TSL 1 (best) BASIC11.17□□□□□ -0.62
Vps9d1Q8C190 Gm8522-201ENSMUST00000118416 1929 ntBASIC11.17□□□□□ -0.62
Vps9d1Q8C190 Dppa4-201ENSMUST00000050705 1378 ntAPPRIS ALT2 TSL 5 BASIC11.17□□□□□ -0.62
Vps9d1Q8C190 Tmod2-201ENSMUST00000064433 9884 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Vps9d1Q8C190 Ltbp2-201ENSMUST00000002073 6769 ntAPPRIS ALT2 TSL 5 BASIC11.17□□□□□ -0.62
Vps9d1Q8C190 Zfp251-201ENSMUST00000080406 3497 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Vps9d1Q8C190 Syt11-203ENSMUST00000107505 5020 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Vps9d1Q8C190 Zfp112-204ENSMUST00000215113 2628 ntAPPRIS ALT2 TSL 5 BASIC11.17□□□□□ -0.62
Vps9d1Q8C190 Nfasc-203ENSMUST00000163770 3903 ntAPPRIS ALT2 TSL 5 BASIC11.17□□□□□ -0.62
Vps9d1Q8C190 Gm17230-201ENSMUST00000171194 3942 ntBASIC11.17□□□□□ -0.62
Vps9d1Q8C190 Nrg1-211ENSMUST00000208497 2096 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
Vps9d1Q8C190 Ppm1g-201ENSMUST00000031032 2307 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Vps9d1Q8C190 Rnf214-208ENSMUST00000161187 2847 ntAPPRIS ALT2 TSL 1 (best) BASIC11.17□□□□□ -0.62
Vps9d1Q8C190 Mob4-205ENSMUST00000162364 2840 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Vps9d1Q8C190 Adarb1-204ENSMUST00000105406 6662 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
Vps9d1Q8C190 Gm12036-201ENSMUST00000120008 530 ntBASIC11.17□□□□□ -0.62
Vps9d1Q8C190 1700012C08Rik-201ENSMUST00000141554 363 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
Vps9d1Q8C190 Gm7809-201ENSMUST00000153199 742 ntBASIC11.17□□□□□ -0.62
Vps9d1Q8C190 Gm24548-201ENSMUST00000158650 108 ntBASIC11.17□□□□□ -0.62
Vps9d1Q8C190 Stx5a-219ENSMUST00000177373 995 ntTSL 5 BASIC11.17□□□□□ -0.62
Vps9d1Q8C190 Gm8494-201ENSMUST00000178171 1233 ntBASIC11.17□□□□□ -0.62
Vps9d1Q8C190 Gm3890-201ENSMUST00000182416 207 ntBASIC11.17□□□□□ -0.62
Vps9d1Q8C190 1700120C18Rik-201ENSMUST00000182952 985 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
Vps9d1Q8C190 Gm28085-201ENSMUST00000189281 1137 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
Vps9d1Q8C190 Gm42920-201ENSMUST00000196616 409 ntTSL 3 BASIC11.17□□□□□ -0.62
Vps9d1Q8C190 Brsk1-205ENSMUST00000206024 1216 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
Vps9d1Q8C190 Polr2e-201ENSMUST00000004786 1148 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Vps9d1Q8C190 Cryba4-201ENSMUST00000086629 746 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Vps9d1Q8C190 Trpt1-201ENSMUST00000088223 1142 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Vps9d1Q8C190 Mfsd13b-205ENSMUST00000216241 1761 ntAPPRIS ALT2 TSL 5 BASIC11.17□□□□□ -0.62
Vps9d1Q8C190 Rasgrp4-205ENSMUST00000159975 2296 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
Vps9d1Q8C190 Apbb1-201ENSMUST00000081165 2530 ntAPPRIS ALT1 TSL 5 BASIC11.17□□□□□ -0.62
Vps9d1Q8C190 Nhlrc3-201ENSMUST00000056749 5047 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Vps9d1Q8C190 Galnt10-201ENSMUST00000066987 4715 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Vps9d1Q8C190 Cd40-201ENSMUST00000017799 2986 ntAPPRIS P4 TSL 1 (best) BASIC11.17□□□□□ -0.62
Vps9d1Q8C190 Th-202ENSMUST00000105929 1950 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
Vps9d1Q8C190 Taz-204ENSMUST00000124200 1742 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
Vps9d1Q8C190 Tef-202ENSMUST00000109553 4401 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Vps9d1Q8C190 Ntpcr-202ENSMUST00000065135 1497 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
Vps9d1Q8C190 Phactr1-213ENSMUST00000148891 5307 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
Vps9d1Q8C190 Cbx7-201ENSMUST00000089293 3388 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Vps9d1Q8C190 Gm4316-201ENSMUST00000212411 2617 ntTSL 5 BASIC11.17□□□□□ -0.62
Vps9d1Q8C190 Axin2-201ENSMUST00000052915 4260 ntAPPRIS P2 TSL 1 (best) BASIC11.17□□□□□ -0.62
Vps9d1Q8C190 Plscr1-201ENSMUST00000093801 2302 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Vps9d1Q8C190 Ebag9-201ENSMUST00000022964 1613 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Vps9d1Q8C190 Tmem132a-201ENSMUST00000025645 3657 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Vps9d1Q8C190 Cnmd-203ENSMUST00000165835 1362 ntAPPRIS ALT2 TSL 1 (best) BASIC11.16□□□□□ -0.62
Vps9d1Q8C190 Taldo1-204ENSMUST00000211654 1362 ntTSL 5 BASIC11.16□□□□□ -0.62
Vps9d1Q8C190 Spata13-210ENSMUST00000162945 5469 ntAPPRIS ALT2 TSL 1 (best) BASIC11.16□□□□□ -0.62
Vps9d1Q8C190 Rgr-203ENSMUST00000225070 4704 ntBASIC11.16□□□□□ -0.62
Retrieved 100 of 76,532 protein–RNA pairs in 105 ms