Protein–RNA interactions for Protein: Q8C0E3

Trim47, Tripartite motif-containing protein 47, mousemouse

Predictions only

Length 641 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim47Q8C0E3 Plxna4os1-201ENSMUST00000150314 1977 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Trim47Q8C0E3 Rbm20-204ENSMUST00000164202 6592 ntAPPRIS P1 TSL 5 BASIC13.26□□□□□ -0.29
Trim47Q8C0E3 H3f3b-201ENSMUST00000016703 1993 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Trim47Q8C0E3 Tnnt3-224ENSMUST00000169299 1013 ntAPPRIS ALT2 TSL 5 BASIC13.26□□□□□ -0.29
Trim47Q8C0E3 Spert-204ENSMUST00000169658 1474 ntAPPRIS ALT2 TSL 3 BASIC13.26□□□□□ -0.29
Trim47Q8C0E3 Gm4310-201ENSMUST00000177847 889 ntBASIC13.26□□□□□ -0.29
Trim47Q8C0E3 Tnnt3-226ENSMUST00000180152 1067 ntAPPRIS ALT2 TSL 5 BASIC13.26□□□□□ -0.29
Trim47Q8C0E3 Gm26841-201ENSMUST00000180725 1787 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Trim47Q8C0E3 Gm5732-201ENSMUST00000182596 1007 ntBASIC13.26□□□□□ -0.29
Trim47Q8C0E3 Rbpsuh-rs3-201ENSMUST00000182751 1441 ntBASIC13.26□□□□□ -0.29
Trim47Q8C0E3 Slc7a11-205ENSMUST00000194462 2419 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Trim47Q8C0E3 2610011E03Rik-201ENSMUST00000200128 2235 ntBASIC13.26□□□□□ -0.29
Trim47Q8C0E3 Gm43050-202ENSMUST00000201152 651 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Trim47Q8C0E3 Gm31597-201ENSMUST00000211176 515 ntTSL 2 BASIC13.26□□□□□ -0.29
Trim47Q8C0E3 Olfr95-202ENSMUST00000216318 4917 ntAPPRIS P1 TSL 5 BASIC13.26□□□□□ -0.29
Trim47Q8C0E3 AC113082.1-201ENSMUST00000217324 327 ntBASIC13.26□□□□□ -0.29
Trim47Q8C0E3 AC153830.1-201ENSMUST00000218522 594 ntTSL 5 BASIC13.26□□□□□ -0.29
Trim47Q8C0E3 AC154828.2-201ENSMUST00000220908 1070 ntBASIC13.26□□□□□ -0.29
Trim47Q8C0E3 AC151275.1-201ENSMUST00000224870 585 ntBASIC13.26□□□□□ -0.29
Trim47Q8C0E3 Rbm48-201ENSMUST00000042753 2368 ntAPPRIS P2 TSL 1 (best) BASIC13.26□□□□□ -0.29
Trim47Q8C0E3 Sdf4-201ENSMUST00000050078 5177 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Trim47Q8C0E3 Rbm12b2-201ENSMUST00000063839 3327 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Trim47Q8C0E3 Nudt7-201ENSMUST00000066514 935 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
Trim47Q8C0E3 Msra-201ENSMUST00000067927 1860 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Trim47Q8C0E3 Myzap-201ENSMUST00000093823 2283 ntAPPRIS P2 TSL 1 (best) BASIC13.26□□□□□ -0.29
Trim47Q8C0E3 Sh3kbp1-206ENSMUST00000112456 7317 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Trim47Q8C0E3 Fam78a-201ENSMUST00000056406 4107 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Trim47Q8C0E3 Arhgap20-204ENSMUST00000130405 3881 ntAPPRIS ALT2 TSL 5 BASIC13.26□□□□□ -0.29
Trim47Q8C0E3 Gm17276-201ENSMUST00000180839 2782 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Trim47Q8C0E3 Cpt1c-206ENSMUST00000212836 2716 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Trim47Q8C0E3 Mypopos-202ENSMUST00000205975 2321 ntBASIC13.25□□□□□ -0.29
Trim47Q8C0E3 Psd2-205ENSMUST00000176873 4375 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
Trim47Q8C0E3 Dis3l-208ENSMUST00000168844 3575 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Trim47Q8C0E3 Fbf1-202ENSMUST00000106435 4651 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Trim47Q8C0E3 Det1-202ENSMUST00000107431 1439 ntTSL 5 BASIC13.25□□□□□ -0.29
Trim47Q8C0E3 Gm6580-201ENSMUST00000117504 1357 ntBASIC13.25□□□□□ -0.29
Trim47Q8C0E3 Med25-211ENSMUST00000208551 2678 ntTSL 2 BASIC13.25□□□□□ -0.29
Trim47Q8C0E3 Nrg1-206ENSMUST00000208205 2645 ntAPPRIS ALT2 TSL 5 BASIC13.25□□□□□ -0.29
Trim47Q8C0E3 Gm19434-201ENSMUST00000204330 2573 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Trim47Q8C0E3 Inca1-202ENSMUST00000108541 1150 ntAPPRIS P3 TSL 1 (best) BASIC13.25□□□□□ -0.29
Trim47Q8C0E3 Gm7851-201ENSMUST00000117574 323 ntBASIC13.25□□□□□ -0.29
Trim47Q8C0E3 Inca1-205ENSMUST00000126114 1189 ntAPPRIS P3 TSL 1 (best) BASIC13.25□□□□□ -0.29
Trim47Q8C0E3 Gm15884-201ENSMUST00000143765 643 ntTSL 3 BASIC13.25□□□□□ -0.29
Trim47Q8C0E3 Smim5-203ENSMUST00000152171 1113 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Trim47Q8C0E3 Gm26759-201ENSMUST00000181773 1251 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Trim47Q8C0E3 Gm9034-201ENSMUST00000182071 1005 ntBASIC13.25□□□□□ -0.29
Trim47Q8C0E3 Gm4482-201ENSMUST00000200876 742 ntBASIC13.25□□□□□ -0.29
Trim47Q8C0E3 Lgals4-207ENSMUST00000208971 1298 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
Trim47Q8C0E3 AC131330.1-201ENSMUST00000227814 1015 ntBASIC13.25□□□□□ -0.29
Trim47Q8C0E3 Inca1-201ENSMUST00000073625 1218 ntAPPRIS P3 TSL 1 (best) BASIC13.25□□□□□ -0.29
Trim47Q8C0E3 Olfr959-201ENSMUST00000079178 1055 ntAPPRIS P1 BASIC13.25□□□□□ -0.29
Trim47Q8C0E3 Misp-202ENSMUST00000169041 2497 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Trim47Q8C0E3 Anapc7-202ENSMUST00000119792 3599 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Trim47Q8C0E3 Slc19a1-209ENSMUST00000144234 2309 ntAPPRIS P2 TSL 1 (best) BASIC13.25□□□□□ -0.29
Trim47Q8C0E3 Ikzf4-203ENSMUST00000221150 2213 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Trim47Q8C0E3 Wdr20rt-201ENSMUST00000046331 2228 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Trim47Q8C0E3 Trpv4-205ENSMUST00000112225 3226 ntAPPRIS P1 TSL 5 BASIC13.25□□□□□ -0.29
Trim47Q8C0E3 Irf1-203ENSMUST00000108922 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
Trim47Q8C0E3 Cyth3-201ENSMUST00000110727 2068 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Trim47Q8C0E3 Slc38a6-206ENSMUST00000140523 3032 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Trim47Q8C0E3 Gm15609-201ENSMUST00000155610 2960 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Trim47Q8C0E3 Slc25a40-201ENSMUST00000066921 2784 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Trim47Q8C0E3 Olfr482-202ENSMUST00000217304 2612 ntAPPRIS P1 TSL 5 BASIC13.25□□□□□ -0.29
Trim47Q8C0E3 Wisp1-201ENSMUST00000005255 5097 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Trim47Q8C0E3 Ibtk-201ENSMUST00000039213 5650 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Trim47Q8C0E3 Usp3-205ENSMUST00000127569 5607 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Trim47Q8C0E3 Mbnl2-208ENSMUST00000227594 2334 ntAPPRIS P1 BASIC13.24□□□□□ -0.29
Trim47Q8C0E3 Lcp2-202ENSMUST00000109329 2209 ntAPPRIS ALT2 TSL 1 (best) BASIC13.24□□□□□ -0.29
Trim47Q8C0E3 Gtf2i-203ENSMUST00000111261 4381 ntAPPRIS ALT2 TSL 5 BASIC13.24□□□□□ -0.29
Trim47Q8C0E3 Rtl5-204ENSMUST00000188731 4325 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Trim47Q8C0E3 D17H6S53E-201ENSMUST00000061859 2142 ntAPPRIS P1 TSL 3 BASIC13.24□□□□□ -0.29
Trim47Q8C0E3 Nfatc2-209ENSMUST00000171689 2742 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Trim47Q8C0E3 Slc16a12-201ENSMUST00000009522 4051 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Trim47Q8C0E3 Phactr3-202ENSMUST00000103066 2680 ntAPPRIS P4 TSL 1 (best) BASIC13.24□□□□□ -0.29
Trim47Q8C0E3 Akr1d1-201ENSMUST00000040987 2699 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Trim47Q8C0E3 Sipa1l2-204ENSMUST00000212987 6690 ntAPPRIS P2 TSL 5 BASIC13.24□□□□□ -0.29
Trim47Q8C0E3 Rnf133-201ENSMUST00000063548 1308 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Trim47Q8C0E3 Gm12036-201ENSMUST00000120008 530 ntBASIC13.24□□□□□ -0.29
Trim47Q8C0E3 Gm13899-201ENSMUST00000121519 1255 ntBASIC13.24□□□□□ -0.29
Trim47Q8C0E3 Bcas3os2-201ENSMUST00000134305 661 ntTSL 5 BASIC13.24□□□□□ -0.29
Trim47Q8C0E3 1110038B12Rik-208ENSMUST00000174714 520 ntTSL 2 BASIC13.24□□□□□ -0.29
Trim47Q8C0E3 Dleu2-205ENSMUST00000182325 463 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Trim47Q8C0E3 Dleu2-212ENSMUST00000183079 535 ntTSL 3 BASIC13.24□□□□□ -0.29
Trim47Q8C0E3 Gm27227-201ENSMUST00000183413 633 ntTSL 3 BASIC13.24□□□□□ -0.29
Trim47Q8C0E3 Gm28375-201ENSMUST00000185304 430 ntTSL 3 BASIC13.24□□□□□ -0.29
Trim47Q8C0E3 Gm19287-201ENSMUST00000203190 358 ntBASIC13.24□□□□□ -0.29
Trim47Q8C0E3 Isg20-206ENSMUST00000205981 834 ntTSL 3 BASIC13.24□□□□□ -0.29
Trim47Q8C0E3 Cotl1-203ENSMUST00000211873 826 ntTSL 5 BASIC13.24□□□□□ -0.29
Trim47Q8C0E3 Nsd1-205ENSMUST00000224693 852 ntBASIC13.24□□□□□ -0.29
Trim47Q8C0E3 Neil1-201ENSMUST00000034842 1170 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Trim47Q8C0E3 Prop1-201ENSMUST00000051159 1133 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Trim47Q8C0E3 Rpl17-201ENSMUST00000079716 775 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Trim47Q8C0E3 Lyz1-201ENSMUST00000092162 1263 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Trim47Q8C0E3 Faap100-201ENSMUST00000026448 3193 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Trim47Q8C0E3 Tubgcp2-201ENSMUST00000026547 2960 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Trim47Q8C0E3 Ppp1r18-203ENSMUST00000127442 3524 ntAPPRIS ALT2 TSL 1 (best) BASIC13.24□□□□□ -0.29
Trim47Q8C0E3 Arntl2-203ENSMUST00000111638 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC13.24□□□□□ -0.29
Trim47Q8C0E3 Arntl2-201ENSMUST00000080530 1740 ntAPPRIS P3 TSL 1 (best) BASIC13.24□□□□□ -0.29
Trim47Q8C0E3 Immt-202ENSMUST00000101301 2299 ntAPPRIS ALT2 TSL 1 (best) BASIC13.24□□□□□ -0.29
Trim47Q8C0E3 Zhx2-201ENSMUST00000096430 4376 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Retrieved 100 of 76,532 protein–RNA pairs in 50.5 ms