Protein–RNA interactions for Protein: Q8BP27

Sfr1, Swi5-dependent recombination DNA repair protein 1 homolog, mousemouse

Predictions only

Length 319 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sfr1Q8BP27 Aldh1a7-201ENSMUST00000025656 2066 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Sfr1Q8BP27 B230398E01Rik-201ENSMUST00000125186 1958 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Sfr1Q8BP27 Cd109-201ENSMUST00000093812 5860 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Sfr1Q8BP27 Tardbp-204ENSMUST00000105699 1904 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Sfr1Q8BP27 Rnf44-217ENSMUST00000150806 3772 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Sfr1Q8BP27 Igtp-202ENSMUST00000094169 1767 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Sfr1Q8BP27 Cryz-208ENSMUST00000192462 2505 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Sfr1Q8BP27 Adgrv1-206ENSMUST00000128120 1591 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Sfr1Q8BP27 Fgf12-201ENSMUST00000100024 3065 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Sfr1Q8BP27 Adamtsl3-204ENSMUST00000173828 2292 ntTSL 5 BASIC12.22□□□□□ -0.45
Sfr1Q8BP27 Wdcp-205ENSMUST00000220215 2202 ntAPPRIS ALT2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Sfr1Q8BP27 Gm17767-201ENSMUST00000189410 1470 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Sfr1Q8BP27 Ildr1-203ENSMUST00000119464 2878 ntAPPRIS P3 TSL 1 (best) BASIC12.22□□□□□ -0.45
Sfr1Q8BP27 Il21r-202ENSMUST00000206103 2147 ntAPPRIS ALT2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Sfr1Q8BP27 Ercc8-201ENSMUST00000054835 2111 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Sfr1Q8BP27 Kdelr1-205ENSMUST00000211716 1350 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Sfr1Q8BP27 Sstr5-201ENSMUST00000051864 2733 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Sfr1Q8BP27 Gm45765-202ENSMUST00000212921 1313 ntTSL 5 BASIC12.22□□□□□ -0.45
Sfr1Q8BP27 8430408G22Rik-201ENSMUST00000067354 1339 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Sfr1Q8BP27 Gm6890-201ENSMUST00000114117 776 ntAPPRIS P1 TSL 5 BASIC12.22□□□□□ -0.45
Sfr1Q8BP27 Gm12984-201ENSMUST00000145711 273 ntTSL 5 BASIC12.22□□□□□ -0.45
Sfr1Q8BP27 Gm11210-201ENSMUST00000150203 422 ntTSL 3 BASIC12.22□□□□□ -0.45
Sfr1Q8BP27 Adtrp-204ENSMUST00000179758 1046 ntAPPRIS ALT2 TSL 5 BASIC12.22□□□□□ -0.45
Sfr1Q8BP27 H2al1g-201ENSMUST00000179859 509 ntAPPRIS P1 BASIC12.22□□□□□ -0.45
Sfr1Q8BP27 Gm45799-208ENSMUST00000211054 490 ntAPPRIS P2 TSL 3 BASIC12.22□□□□□ -0.45
Sfr1Q8BP27 Cga-201ENSMUST00000029975 687 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Sfr1Q8BP27 Cbx1-202ENSMUST00000079702 912 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Sfr1Q8BP27 Hmgcs2-202ENSMUST00000120541 2524 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Sfr1Q8BP27 Rspo3-201ENSMUST00000092623 3085 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Sfr1Q8BP27 Pparg-204ENSMUST00000203732 1826 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Sfr1Q8BP27 Nacc2-202ENSMUST00000114159 6675 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Sfr1Q8BP27 Cd300lg-201ENSMUST00000017453 2353 ntAPPRIS P3 TSL 1 (best) BASIC12.22□□□□□ -0.45
Sfr1Q8BP27 Nfe2l1-210ENSMUST00000167110 3547 ntAPPRIS ALT2 TSL 2 BASIC12.22□□□□□ -0.45
Sfr1Q8BP27 Lnx1-206ENSMUST00000121690 2302 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Sfr1Q8BP27 Gm3716-202ENSMUST00000198582 2879 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Sfr1Q8BP27 Fam118b-202ENSMUST00000063782 1662 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Sfr1Q8BP27 2810407A14Rik-201ENSMUST00000069809 1699 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Sfr1Q8BP27 Sgk2-201ENSMUST00000018012 2693 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Sfr1Q8BP27 Foxp1-201ENSMUST00000074346 2118 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Sfr1Q8BP27 Arhgap24-202ENSMUST00000073302 3151 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Sfr1Q8BP27 Tns2-201ENSMUST00000046144 4718 ntAPPRIS ALT2 TSL 5 BASIC12.22□□□□□ -0.45
Sfr1Q8BP27 Epb41l1-206ENSMUST00000109577 6251 ntTSL 5 BASIC12.22□□□□□ -0.45
Sfr1Q8BP27 Jph2-202ENSMUST00000109425 4155 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Sfr1Q8BP27 Gm7224-201ENSMUST00000121359 2066 ntBASIC12.22□□□□□ -0.45
Sfr1Q8BP27 Lrp8-206ENSMUST00000126573 2590 ntTSL 5 BASIC12.22□□□□□ -0.45
Sfr1Q8BP27 Mapk8-204ENSMUST00000111944 1528 ntAPPRIS ALT1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Sfr1Q8BP27 Ccdc159-202ENSMUST00000170304 1519 ntAPPRIS ALT2 TSL 1 (best) BASIC12.21□□□□□ -0.45
Sfr1Q8BP27 Ikzf1-201ENSMUST00000018798 1542 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Sfr1Q8BP27 H2-Q1-201ENSMUST00000073208 2024 ntAPPRIS P2 TSL 1 (best) BASIC12.21□□□□□ -0.45
Sfr1Q8BP27 Atp6v0a1-210ENSMUST00000168757 3967 ntAPPRIS ALT1 TSL 5 BASIC12.21□□□□□ -0.45
Sfr1Q8BP27 Kalrn-201ENSMUST00000076810 8940 ntAPPRIS P1 TSL 5 BASIC12.21□□□□□ -0.45
Sfr1Q8BP27 Spag6-201ENSMUST00000095132 2458 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Sfr1Q8BP27 Nudt8-201ENSMUST00000155405 3904 ntAPPRIS P1 TSL 2 BASIC12.21□□□□□ -0.45
Sfr1Q8BP27 Gm17244-201ENSMUST00000192482 3416 ntBASIC12.21□□□□□ -0.45
Sfr1Q8BP27 Mrap2-201ENSMUST00000049457 1931 ntAPPRIS P1 TSL 3 BASIC12.21□□□□□ -0.45
Sfr1Q8BP27 A430108G06Rik-201ENSMUST00000153461 1428 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Sfr1Q8BP27 Tceal8-204ENSMUST00000163584 2358 ntAPPRIS P1 TSL 3 BASIC12.21□□□□□ -0.45
Sfr1Q8BP27 Hdac5-202ENSMUST00000107150 3759 ntAPPRIS ALT2 TSL 1 (best) BASIC12.21□□□□□ -0.45
Sfr1Q8BP27 Tmem129-201ENSMUST00000019439 2828 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Sfr1Q8BP27 Mcm9-204ENSMUST00000219838 4132 ntTSL 5 BASIC12.21□□□□□ -0.45
Sfr1Q8BP27 Slc6a4-201ENSMUST00000021195 2725 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Sfr1Q8BP27 Klf11-201ENSMUST00000020982 4086 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Sfr1Q8BP27 Adcy9-201ENSMUST00000005719 4457 ntAPPRIS P3 TSL 1 (best) BASIC12.21□□□□□ -0.45
Sfr1Q8BP27 Slc13a5-205ENSMUST00000208056 3111 ntTSL 5 BASIC12.21□□□□□ -0.45
Sfr1Q8BP27 Tm9sf2-201ENSMUST00000026624 3107 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Sfr1Q8BP27 Asph-207ENSMUST00000108333 2652 ntTSL 5 BASIC12.21□□□□□ -0.45
Sfr1Q8BP27 Epb41l1-203ENSMUST00000103136 6249 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Sfr1Q8BP27 Thrb-203ENSMUST00000091471 1758 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Sfr1Q8BP27 Lmnb2-201ENSMUST00000057623 3531 ntAPPRIS ALT2 TSL 1 (best) BASIC12.21□□□□□ -0.45
Sfr1Q8BP27 Sec16a-202ENSMUST00000114082 8797 ntAPPRIS ALT2 TSL 5 BASIC12.21□□□□□ -0.45
Sfr1Q8BP27 Tmem140-201ENSMUST00000074949 2614 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Sfr1Q8BP27 Rps10-203ENSMUST00000114882 614 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Sfr1Q8BP27 Gm14247-201ENSMUST00000120950 237 ntBASIC12.21□□□□□ -0.45
Sfr1Q8BP27 Rpl13-ps1-201ENSMUST00000121801 668 ntBASIC12.21□□□□□ -0.45
Sfr1Q8BP27 Gm15906-201ENSMUST00000124746 323 ntTSL 5 BASIC12.21□□□□□ -0.45
Sfr1Q8BP27 Sh2d6-203ENSMUST00000159877 1210 ntAPPRIS ALT2 TSL 1 (best) BASIC12.21□□□□□ -0.45
Sfr1Q8BP27 Sh2d6-206ENSMUST00000162561 1251 ntAPPRIS P5 TSL 1 (best) BASIC12.21□□□□□ -0.45
Sfr1Q8BP27 Vdac1-201ENSMUST00000020673 891 ntTSL 5 BASIC12.21□□□□□ -0.45
Sfr1Q8BP27 Gm45224-201ENSMUST00000208203 414 ntBASIC12.21□□□□□ -0.45
Sfr1Q8BP27 Gm44710-201ENSMUST00000208885 471 ntTSL 2 BASIC12.21□□□□□ -0.45
Sfr1Q8BP27 Gm18212-201ENSMUST00000211678 889 ntBASIC12.21□□□□□ -0.45
Sfr1Q8BP27 4930578M07Rik-202ENSMUST00000212946 552 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Sfr1Q8BP27 AC131777.1-201ENSMUST00000214749 387 ntTSL 3 BASIC12.21□□□□□ -0.45
Sfr1Q8BP27 CT571245.2-201ENSMUST00000218421 305 ntBASIC12.21□□□□□ -0.45
Sfr1Q8BP27 Gm31793-201ENSMUST00000218557 415 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Sfr1Q8BP27 CT573034.1-201ENSMUST00000222983 313 ntBASIC12.21□□□□□ -0.45
Sfr1Q8BP27 Pycr1-206ENSMUST00000170556 2914 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Sfr1Q8BP27 Nfe2l1-211ENSMUST00000167149 4596 ntAPPRIS P3 TSL 1 (best) BASIC12.21□□□□□ -0.45
Sfr1Q8BP27 Gm5936-201ENSMUST00000114116 2857 ntAPPRIS P1 TSL 3 BASIC12.21□□□□□ -0.45
Sfr1Q8BP27 Gm5640-201ENSMUST00000114119 2861 ntAPPRIS P1 TSL 3 BASIC12.21□□□□□ -0.45
Sfr1Q8BP27 DXBay18-201ENSMUST00000080324 2862 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Sfr1Q8BP27 Gm14685-201ENSMUST00000088459 2864 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Sfr1Q8BP27 Kdm5c-201ENSMUST00000082177 5520 ntAPPRIS ALT2 TSL 5 BASIC12.21□□□□□ -0.46
Sfr1Q8BP27 Neu2-201ENSMUST00000070898 1570 ntAPPRIS P3 TSL 1 (best) BASIC12.21□□□□□ -0.46
Sfr1Q8BP27 Runx3-201ENSMUST00000056977 3884 ntAPPRIS P2 TSL 1 (best) BASIC12.21□□□□□ -0.46
Sfr1Q8BP27 Ptpn2-203ENSMUST00000122412 2667 ntAPPRIS ALT2 TSL 1 (best) BASIC12.21□□□□□ -0.46
Sfr1Q8BP27 Rcor3-201ENSMUST00000073279 3748 ntTSL 1 (best) BASIC12.21□□□□□ -0.46
Sfr1Q8BP27 Dnmt3c-201ENSMUST00000119996 2223 ntAPPRIS P1 BASIC12.21□□□□□ -0.46
Sfr1Q8BP27 Trmt61b-202ENSMUST00000137830 2572 ntTSL 1 (best) BASIC12.21□□□□□ -0.46
Sfr1Q8BP27 Cald1-205ENSMUST00000115027 4777 ntTSL 5 BASIC12.21□□□□□ -0.46
Retrieved 100 of 76,532 protein–RNA pairs in 37.4 ms