Protein–RNA interactions for Protein: Q8BI21

Rnf38, E3 ubiquitin-protein ligase RNF38, mousemouse

Predictions only

Length 518 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf38Q8BI21 Frmd3-201ENSMUST00000084474 4136 ntAPPRIS P3 TSL 1 (best) BASIC11.55□□□□□ -0.56
Rnf38Q8BI21 Cln3-201ENSMUST00000032962 2386 ntAPPRIS P2 TSL 1 (best) BASIC11.55□□□□□ -0.56
Rnf38Q8BI21 Nmt2-202ENSMUST00000091504 1676 ntTSL 5 BASIC11.55□□□□□ -0.56
Rnf38Q8BI21 2310026I22Rik-201ENSMUST00000180941 1300 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
Rnf38Q8BI21 Gm4366-201ENSMUST00000201488 1342 ntBASIC11.55□□□□□ -0.56
Rnf38Q8BI21 Actg2-201ENSMUST00000075161 1333 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Rnf38Q8BI21 Sorl1-201ENSMUST00000060989 10715 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Rnf38Q8BI21 BC024139-202ENSMUST00000089654 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC11.55□□□□□ -0.56
Rnf38Q8BI21 Frmd8-201ENSMUST00000025728 4504 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Rnf38Q8BI21 Dnajc16-201ENSMUST00000038014 5969 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Rnf38Q8BI21 Camta2-202ENSMUST00000100933 4383 ntAPPRIS ALT2 TSL 5 BASIC11.55□□□□□ -0.56
Rnf38Q8BI21 Slc13a5-205ENSMUST00000208056 3111 ntTSL 5 BASIC11.55□□□□□ -0.56
Rnf38Q8BI21 Vdr-201ENSMUST00000023119 4370 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Rnf38Q8BI21 Abcc5-202ENSMUST00000079158 5811 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Rnf38Q8BI21 Kcnk2-206ENSMUST00000193319 1548 ntAPPRIS P4 TSL 1 (best) BASIC11.55□□□□□ -0.56
Rnf38Q8BI21 Aicda-201ENSMUST00000043301 2405 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Rnf38Q8BI21 6030407O03Rik-201ENSMUST00000189514 2094 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
Rnf38Q8BI21 March7-202ENSMUST00000102747 2271 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Rnf38Q8BI21 Tcirg1-204ENSMUST00000126070 3041 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Rnf38Q8BI21 Gm18782-201ENSMUST00000209023 1399 ntBASIC11.54□□□□□ -0.56
Rnf38Q8BI21 Gemin2-201ENSMUST00000021379 1588 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Rnf38Q8BI21 Abi1-208ENSMUST00000139038 2899 ntAPPRIS ALT1 TSL 5 BASIC11.54□□□□□ -0.56
Rnf38Q8BI21 Slc19a1-209ENSMUST00000144234 2309 ntAPPRIS P2 TSL 1 (best) BASIC11.54□□□□□ -0.56
Rnf38Q8BI21 Ttpa-201ENSMUST00000098244 3053 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Rnf38Q8BI21 Knop1-206ENSMUST00000126792 3253 ntAPPRIS ALT2 TSL 1 (best) BASIC11.54□□□□□ -0.56
Rnf38Q8BI21 Wdr36-201ENSMUST00000053663 3281 ntAPPRIS P4 TSL 1 (best) BASIC11.54□□□□□ -0.56
Rnf38Q8BI21 Akap5-203ENSMUST00000172992 2711 ntAPPRIS ALT2 TSL 3 BASIC11.54□□□□□ -0.56
Rnf38Q8BI21 Slc30a8-201ENSMUST00000037240 1971 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Rnf38Q8BI21 Acsl6-202ENSMUST00000064690 1988 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
Rnf38Q8BI21 Grm5-202ENSMUST00000125009 8047 ntAPPRIS P3 TSL 5 BASIC11.54□□□□□ -0.56
Rnf38Q8BI21 Shtn1-201ENSMUST00000047511 4081 ntAPPRIS P4 TSL 1 (best) BASIC11.54□□□□□ -0.56
Rnf38Q8BI21 Igsf9-201ENSMUST00000052629 4133 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Rnf38Q8BI21 Wdr75-201ENSMUST00000027139 2953 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Rnf38Q8BI21 Hcrtr2-203ENSMUST00000184757 2230 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Rnf38Q8BI21 Ttc30a2-201ENSMUST00000099995 2431 ntAPPRIS P1 BASIC11.54□□□□□ -0.56
Rnf38Q8BI21 Cgnl1-202ENSMUST00000121322 6541 ntAPPRIS ALT2 TSL 5 BASIC11.54□□□□□ -0.56
Rnf38Q8BI21 Toe1-202ENSMUST00000106455 1209 ntAPPRIS ALT2 TSL 1 (best) BASIC11.54□□□□□ -0.56
Rnf38Q8BI21 3110009E18Rik-203ENSMUST00000112644 488 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Rnf38Q8BI21 Dusp13-203ENSMUST00000120956 1070 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
Rnf38Q8BI21 Retn-201ENSMUST00000012849 874 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Rnf38Q8BI21 Gm11379-201ENSMUST00000154678 381 ntTSL 3 BASIC11.54□□□□□ -0.56
Rnf38Q8BI21 1700069L16Rik-203ENSMUST00000162388 706 ntAPPRIS ALT2 TSL 1 (best) BASIC11.54□□□□□ -0.56
Rnf38Q8BI21 Pyy-204ENSMUST00000177304 551 ntAPPRIS ALT2 TSL 2 BASIC11.54□□□□□ -0.56
Rnf38Q8BI21 Gm27572-201ENSMUST00000183702 255 ntBASIC11.54□□□□□ -0.56
Rnf38Q8BI21 Gm42627-201ENSMUST00000197347 224 ntBASIC11.54□□□□□ -0.56
Rnf38Q8BI21 Gm43133-201ENSMUST00000197472 463 ntBASIC11.54□□□□□ -0.56
Rnf38Q8BI21 Stambp-ps1-201ENSMUST00000209280 1208 ntBASIC11.54□□□□□ -0.56
Rnf38Q8BI21 AC162938.2-203ENSMUST00000216604 1134 ntTSL 5 BASIC11.54□□□□□ -0.56
Rnf38Q8BI21 AC140406.1-201ENSMUST00000226481 465 ntBASIC11.54□□□□□ -0.56
Rnf38Q8BI21 4930562F07Rik-201ENSMUST00000028061 830 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
Rnf38Q8BI21 1700028J19Rik-201ENSMUST00000037220 1245 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Rnf38Q8BI21 Krtap4-7-201ENSMUST00000055121 984 ntAPPRIS P1 BASIC11.54□□□□□ -0.56
Rnf38Q8BI21 Gm19221-201ENSMUST00000221827 1477 ntBASIC11.54□□□□□ -0.56
Rnf38Q8BI21 Gm10767-202ENSMUST00000168767 2067 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Rnf38Q8BI21 A430033K04Rik-203ENSMUST00000198958 2264 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
Rnf38Q8BI21 Emp1-201ENSMUST00000032330 2721 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Rnf38Q8BI21 Taz-204ENSMUST00000124200 1742 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
Rnf38Q8BI21 Galnt9-202ENSMUST00000165856 1541 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
Rnf38Q8BI21 Dstyk-201ENSMUST00000045110 6282 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Rnf38Q8BI21 Hmg20a-204ENSMUST00000214869 1782 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
Rnf38Q8BI21 Ephb2-203ENSMUST00000105846 3653 ntAPPRIS ALT2 TSL 5 BASIC11.54□□□□□ -0.56
Rnf38Q8BI21 Dtx3l-202ENSMUST00000114885 2648 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
Rnf38Q8BI21 Pbld1-202ENSMUST00000178684 2404 ntAPPRIS P2 TSL 1 (best) BASIC11.54□□□□□ -0.56
Rnf38Q8BI21 Spop-201ENSMUST00000107722 3063 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Rnf38Q8BI21 Pnkd-202ENSMUST00000087225 2859 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Rnf38Q8BI21 Prf1-202ENSMUST00000219375 2474 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Rnf38Q8BI21 Ckmt1-201ENSMUST00000000317 1620 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Rnf38Q8BI21 Lrrc36-201ENSMUST00000067305 2082 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Rnf38Q8BI21 Gm18626-201ENSMUST00000221512 1409 ntBASIC11.53□□□□□ -0.56
Rnf38Q8BI21 Metap2-208ENSMUST00000181091 1876 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Rnf38Q8BI21 Leprot-201ENSMUST00000030254 1898 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Rnf38Q8BI21 Ngfr-201ENSMUST00000000122 3446 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Rnf38Q8BI21 Ctr9-201ENSMUST00000005749 4300 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Rnf38Q8BI21 Sec23a-201ENSMUST00000021375 4109 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Rnf38Q8BI21 Mical1-202ENSMUST00000099934 3292 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Rnf38Q8BI21 Tceal8-204ENSMUST00000163584 2358 ntAPPRIS P1 TSL 3 BASIC11.53□□□□□ -0.56
Rnf38Q8BI21 Svopl-202ENSMUST00000096040 2366 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Rnf38Q8BI21 Eno3-206ENSMUST00000170716 1461 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Rnf38Q8BI21 Slc17a5-202ENSMUST00000117645 3114 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Rnf38Q8BI21 Mrpl55-203ENSMUST00000108785 792 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Rnf38Q8BI21 Gm12164-201ENSMUST00000121695 551 ntBASIC11.53□□□□□ -0.56
Rnf38Q8BI21 Pcgf1-202ENSMUST00000165164 918 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Rnf38Q8BI21 Cox16-204ENSMUST00000166723 579 ntTSL 2 BASIC11.53□□□□□ -0.56
Rnf38Q8BI21 Gm17028-201ENSMUST00000170026 704 ntTSL 3 BASIC11.53□□□□□ -0.56
Rnf38Q8BI21 Gm8801-201ENSMUST00000173255 1064 ntBASIC11.53□□□□□ -0.56
Rnf38Q8BI21 Gm20442-201ENSMUST00000174630 492 ntTSL 3 BASIC11.53□□□□□ -0.56
Rnf38Q8BI21 Gm27023-201ENSMUST00000182372 285 ntBASIC11.53□□□□□ -0.56
Rnf38Q8BI21 Gm2546-201ENSMUST00000182630 991 ntBASIC11.53□□□□□ -0.56
Rnf38Q8BI21 Gm4691-202ENSMUST00000182989 885 ntTSL 5 BASIC11.53□□□□□ -0.56
Rnf38Q8BI21 Ube2f-210ENSMUST00000191368 1110 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Rnf38Q8BI21 Gm18054-201ENSMUST00000207539 555 ntBASIC11.53□□□□□ -0.56
Rnf38Q8BI21 Gm19963-201ENSMUST00000208413 1255 ntBASIC11.53□□□□□ -0.56
Rnf38Q8BI21 Gm31992-201ENSMUST00000213387 862 ntTSL 5 BASIC11.53□□□□□ -0.56
Rnf38Q8BI21 Tpd52l1-203ENSMUST00000213639 827 ntAPPRIS ALT2 TSL 2 BASIC11.53□□□□□ -0.56
Rnf38Q8BI21 AC153929.1-201ENSMUST00000219009 303 ntBASIC11.53□□□□□ -0.56
Rnf38Q8BI21 Gm6502-202ENSMUST00000097478 1218 ntTSL 5 BASIC11.53□□□□□ -0.56
Rnf38Q8BI21 Oscar-203ENSMUST00000148012 1796 ntAPPRIS ALT2 TSL 5 BASIC11.53□□□□□ -0.56
Rnf38Q8BI21 Hbs1l-209ENSMUST00000219915 2733 ntAPPRIS P2 TSL 1 (best) BASIC11.53□□□□□ -0.56
Rnf38Q8BI21 Fgd3-203ENSMUST00000110087 4698 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Rnf38Q8BI21 Hhipl2-201ENSMUST00000065900 2525 ntAPPRIS P1 TSL 5 BASIC11.53□□□□□ -0.56
Retrieved 100 of 76,532 protein–RNA pairs in 54.5 ms