Protein–RNA interactions for Protein: Q811S7

Ubp1, Upstream-binding protein 1, mousemouse

Predictions only

Length 540 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ubp1Q811S7 Ighv5-7-201ENSMUST00000192302 244 ntBASIC11.84□□□□□ -0.51
Ubp1Q811S7 9530097N15Rik-201ENSMUST00000197819 1068 ntBASIC11.84□□□□□ -0.51
Ubp1Q811S7 Acsm5-207ENSMUST00000207813 1084 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Ubp1Q811S7 Gm45799-208ENSMUST00000211054 490 ntAPPRIS P2 TSL 3 BASIC11.84□□□□□ -0.51
Ubp1Q811S7 Gm17872-201ENSMUST00000222550 532 ntBASIC11.84□□□□□ -0.51
Ubp1Q811S7 4930578I06Rik-201ENSMUST00000022532 1033 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Ubp1Q811S7 Cga-201ENSMUST00000029975 687 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Ubp1Q811S7 H1foo-201ENSMUST00000037831 1113 ntAPPRIS P3 TSL 1 (best) BASIC11.84□□□□□ -0.51
Ubp1Q811S7 BC049730-201ENSMUST00000051714 1172 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Ubp1Q811S7 Cc2d1a-202ENSMUST00000117424 3262 ntAPPRIS ALT2 TSL 5 BASIC11.84□□□□□ -0.51
Ubp1Q811S7 Ric3-201ENSMUST00000055993 5281 ntAPPRIS P3 TSL 1 (best) BASIC11.84□□□□□ -0.51
Ubp1Q811S7 Gm43447-201ENSMUST00000198471 1535 ntBASIC11.84□□□□□ -0.51
Ubp1Q811S7 Tor1aip1-202ENSMUST00000097527 4234 ntAPPRIS ALT2 TSL 1 (best) BASIC11.84□□□□□ -0.51
Ubp1Q811S7 Rab3d-203ENSMUST00000122211 3886 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Ubp1Q811S7 Slc25a24-201ENSMUST00000029477 3431 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Ubp1Q811S7 Rab11fip5-201ENSMUST00000060837 4035 ntAPPRIS P3 TSL 1 (best) BASIC11.84□□□□□ -0.51
Ubp1Q811S7 Abcb9-201ENSMUST00000031354 3661 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Ubp1Q811S7 Pcdhgc4-201ENSMUST00000066140 5024 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Ubp1Q811S7 Nelfcd-202ENSMUST00000109075 2279 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Ubp1Q811S7 Fyn-206ENSMUST00000136659 1910 ntTSL 5 BASIC11.84□□□□□ -0.51
Ubp1Q811S7 Gm14340-201ENSMUST00000148700 1913 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Ubp1Q811S7 Ccr6-203ENSMUST00000166348 1310 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Ubp1Q811S7 Ptprh-202ENSMUST00000166650 3642 ntAPPRIS P1 TSL 5 BASIC11.84□□□□□ -0.51
Ubp1Q811S7 Dpyd-201ENSMUST00000039177 4492 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Ubp1Q811S7 Tram1l1-201ENSMUST00000058994 3889 ntAPPRIS P1 BASIC11.84□□□□□ -0.51
Ubp1Q811S7 AC123619.2-202ENSMUST00000225097 1568 ntBASIC11.84□□□□□ -0.51
Ubp1Q811S7 Mfsd4a-204ENSMUST00000126927 2422 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Ubp1Q811S7 Rin2-202ENSMUST00000110005 4641 ntAPPRIS ALT2 TSL 5 BASIC11.83□□□□□ -0.51
Ubp1Q811S7 Cckar-201ENSMUST00000031093 2930 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.51
Ubp1Q811S7 Ly6e-210ENSMUST00000188866 2068 ntAPPRIS P1 TSL 3 BASIC11.83□□□□□ -0.51
Ubp1Q811S7 Ocln-201ENSMUST00000022140 2839 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Ubp1Q811S7 Tiam1-214ENSMUST00000164263 3569 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Ubp1Q811S7 Pbrm1-207ENSMUST00000112095 7907 ntTSL 5 BASIC11.83□□□□□ -0.52
Ubp1Q811S7 Scn8a-208ENSMUST00000200963 5814 ntTSL 5 BASIC11.83□□□□□ -0.52
Ubp1Q811S7 Kcnn1-204ENSMUST00000212086 2964 ntAPPRIS ALT2 TSL 1 (best) BASIC11.83□□□□□ -0.52
Ubp1Q811S7 Arhgap27-204ENSMUST00000107024 3976 ntAPPRIS ALT2 TSL 5 BASIC11.83□□□□□ -0.52
Ubp1Q811S7 Ptprt-203ENSMUST00000109443 12112 ntAPPRIS ALT2 TSL 1 (best) BASIC11.83□□□□□ -0.52
Ubp1Q811S7 G630016G05Rik-202ENSMUST00000156095 3398 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Ubp1Q811S7 Zbtb40-201ENSMUST00000049583 7192 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Ubp1Q811S7 Slc25a22-203ENSMUST00000106007 2546 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Ubp1Q811S7 Fibin-201ENSMUST00000099626 2267 ntAPPRIS P1 BASIC11.83□□□□□ -0.52
Ubp1Q811S7 Map1b-203ENSMUST00000223725 2669 ntBASIC11.83□□□□□ -0.52
Ubp1Q811S7 Tax1bp3-202ENSMUST00000108477 1153 ntTSL 5 BASIC11.83□□□□□ -0.52
Ubp1Q811S7 Rps10-203ENSMUST00000114882 614 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Ubp1Q811S7 Gm14247-201ENSMUST00000120950 237 ntBASIC11.83□□□□□ -0.52
Ubp1Q811S7 Gm12164-201ENSMUST00000121695 551 ntBASIC11.83□□□□□ -0.52
Ubp1Q811S7 4933406I18Rik-201ENSMUST00000124673 905 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Ubp1Q811S7 Il4-203ENSMUST00000140684 530 ntTSL 2 BASIC11.83□□□□□ -0.52
Ubp1Q811S7 4930551O13Rik-201ENSMUST00000145585 1065 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Ubp1Q811S7 Gm13966-201ENSMUST00000148420 832 ntTSL 3 BASIC11.83□□□□□ -0.52
Ubp1Q811S7 Il4-204ENSMUST00000150568 605 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Ubp1Q811S7 Gm13165-201ENSMUST00000152923 383 ntTSL 5 BASIC11.83□□□□□ -0.52
Ubp1Q811S7 Gm454-201ENSMUST00000160126 751 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Ubp1Q811S7 Gm27390-201ENSMUST00000184516 176 ntBASIC11.83□□□□□ -0.52
Ubp1Q811S7 Ip6k2-202ENSMUST00000192028 1199 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Ubp1Q811S7 Gm17812-201ENSMUST00000204935 318 ntBASIC11.83□□□□□ -0.52
Ubp1Q811S7 Gm18056-201ENSMUST00000207670 568 ntBASIC11.83□□□□□ -0.52
Ubp1Q811S7 Gm18061-201ENSMUST00000208350 562 ntBASIC11.83□□□□□ -0.52
Ubp1Q811S7 Gm18063-201ENSMUST00000208529 568 ntBASIC11.83□□□□□ -0.52
Ubp1Q811S7 Gm18052-201ENSMUST00000208750 559 ntBASIC11.83□□□□□ -0.52
Ubp1Q811S7 Gm8913-201ENSMUST00000209491 641 ntBASIC11.83□□□□□ -0.52
Ubp1Q811S7 Gm7293-201ENSMUST00000216682 1007 ntBASIC11.83□□□□□ -0.52
Ubp1Q811S7 AC153954.1-201ENSMUST00000216959 255 ntBASIC11.83□□□□□ -0.52
Ubp1Q811S7 Ccdc54-201ENSMUST00000062439 1296 ntAPPRIS P1 BASIC11.83□□□□□ -0.52
Ubp1Q811S7 Il4-201ENSMUST00000000889 590 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Ubp1Q811S7 Gm26677-201ENSMUST00000180553 1672 ntTSL 5 BASIC11.83□□□□□ -0.52
Ubp1Q811S7 5033406O09Rik-201ENSMUST00000221314 1662 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Ubp1Q811S7 Foxd4-201ENSMUST00000058600 2345 ntAPPRIS P1 BASIC11.83□□□□□ -0.52
Ubp1Q811S7 Uprt-201ENSMUST00000087867 2304 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Ubp1Q811S7 Fancc-217ENSMUST00000163091 2995 ntAPPRIS ALT2 TSL 5 BASIC11.83□□□□□ -0.52
Ubp1Q811S7 Gm43154-214ENSMUST00000211225 1420 ntTSL 5 BASIC11.83□□□□□ -0.52
Ubp1Q811S7 Myf5-201ENSMUST00000000445 2083 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Ubp1Q811S7 Tmem181a-201ENSMUST00000088940 4405 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Ubp1Q811S7 Mrgprg-201ENSMUST00000058092 1821 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Ubp1Q811S7 Tspan2-201ENSMUST00000029451 4484 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Ubp1Q811S7 Eya1-202ENSMUST00000080664 3426 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Ubp1Q811S7 Astl-201ENSMUST00000059839 2377 ntAPPRIS P3 TSL 1 (best) BASIC11.83□□□□□ -0.52
Ubp1Q811S7 St6galnac5-201ENSMUST00000044278 5667 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Ubp1Q811S7 Tectb-202ENSMUST00000120936 1349 ntTSL 5 BASIC11.83□□□□□ -0.52
Ubp1Q811S7 Trim25-203ENSMUST00000107896 5590 ntAPPRIS P2 TSL 1 (best) BASIC11.83□□□□□ -0.52
Ubp1Q811S7 Kalrn-201ENSMUST00000076810 8940 ntAPPRIS P1 TSL 5 BASIC11.83□□□□□ -0.52
Ubp1Q811S7 Psmd9-201ENSMUST00000100729 2597 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Ubp1Q811S7 Gm42890-202ENSMUST00000167642 2566 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Ubp1Q811S7 Eif5-212ENSMUST00000222375 3547 ntAPPRIS P2 TSL 1 (best) BASIC11.82□□□□□ -0.52
Ubp1Q811S7 Wdr17-211ENSMUST00000175915 4619 ntAPPRIS ALT2 TSL 5 BASIC11.82□□□□□ -0.52
Ubp1Q811S7 Tgfbr1-202ENSMUST00000044234 2861 ntAPPRIS ALT2 TSL 1 (best) BASIC11.82□□□□□ -0.52
Ubp1Q811S7 Ank2-203ENSMUST00000182008 2474 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Ubp1Q811S7 Fbxo18-201ENSMUST00000071564 3567 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Ubp1Q811S7 Nup210-201ENSMUST00000032179 7037 ntAPPRIS P2 TSL 1 (best) BASIC11.82□□□□□ -0.52
Ubp1Q811S7 Dars2-201ENSMUST00000035430 3619 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Ubp1Q811S7 Fbln7-202ENSMUST00000110324 3228 ntAPPRIS P1 TSL 5 BASIC11.82□□□□□ -0.52
Ubp1Q811S7 Zfp809-206ENSMUST00000215902 1800 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Ubp1Q811S7 Ppp1r18-203ENSMUST00000127442 3524 ntAPPRIS ALT2 TSL 1 (best) BASIC11.82□□□□□ -0.52
Ubp1Q811S7 Gm13996-201ENSMUST00000118456 430 ntBASIC11.82□□□□□ -0.52
Ubp1Q811S7 Ggt1-208ENSMUST00000134503 2140 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Ubp1Q811S7 Gm44793-201ENSMUST00000136923 582 ntTSL 2 BASIC11.82□□□□□ -0.52
Ubp1Q811S7 Rhoc-204ENSMUST00000176347 583 ntTSL 5 BASIC11.82□□□□□ -0.52
Ubp1Q811S7 H2al1g-201ENSMUST00000179859 509 ntAPPRIS P1 BASIC11.82□□□□□ -0.52
Ubp1Q811S7 Gm27239-201ENSMUST00000184638 642 ntTSL 3 BASIC11.82□□□□□ -0.52
Ubp1Q811S7 Gm5244-202ENSMUST00000189517 743 ntBASIC11.82□□□□□ -0.52
Retrieved 100 of 76,532 protein–RNA pairs in 54.2 ms