Protein–RNA interactions for Protein: Q80TF3

Pcdh19, Protocadherin-19, mousemouse

Predictions only

Length 1,145 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh19Q80TF3 CT009713.8-201ENSMUST00000225448 560 ntBASIC11.74□□□□□ -0.53
Pcdh19Q80TF3 Rbp2-201ENSMUST00000035029 672 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Pcdh19Q80TF3 Ntng1-201ENSMUST00000051253 327 ntBASIC11.74□□□□□ -0.53
Pcdh19Q80TF3 Cd72-205ENSMUST00000107926 1419 ntAPPRIS P3 TSL 1 (best) BASIC11.74□□□□□ -0.53
Pcdh19Q80TF3 Prx-204ENSMUST00000125990 4298 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Pcdh19Q80TF3 Mast3-203ENSMUST00000211948 4251 ntAPPRIS P2 TSL 1 (best) BASIC11.74□□□□□ -0.53
Pcdh19Q80TF3 Cd79b-201ENSMUST00000044228 1431 ntAPPRIS ALT2 TSL 1 (best) BASIC11.74□□□□□ -0.53
Pcdh19Q80TF3 Cd72-203ENSMUST00000098105 1420 ntAPPRIS ALT2 TSL 1 (best) BASIC11.74□□□□□ -0.53
Pcdh19Q80TF3 5430419D17Rik-201ENSMUST00000050586 2928 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Pcdh19Q80TF3 Cd207-201ENSMUST00000037882 1522 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Pcdh19Q80TF3 Pak1-201ENSMUST00000033040 3065 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Pcdh19Q80TF3 Togaram1-207ENSMUST00000223166 6386 ntAPPRIS ALT2 TSL 1 (best) BASIC11.74□□□□□ -0.53
Pcdh19Q80TF3 Stab1-201ENSMUST00000036618 7999 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Pcdh19Q80TF3 Gm26883-201ENSMUST00000180945 4878 ntTSL 5 BASIC11.74□□□□□ -0.53
Pcdh19Q80TF3 Hnrnpa2b1-203ENSMUST00000114459 1728 ntAPPRIS ALT1 TSL 5 BASIC11.74□□□□□ -0.53
Pcdh19Q80TF3 Catsper4-201ENSMUST00000055892 1725 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Pcdh19Q80TF3 Gm12802-201ENSMUST00000145510 1813 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Pcdh19Q80TF3 Mfsd4a-207ENSMUST00000159038 1957 ntAPPRIS P2 TSL 5 BASIC11.74□□□□□ -0.53
Pcdh19Q80TF3 2610011E03Rik-201ENSMUST00000200128 2235 ntBASIC11.74□□□□□ -0.53
Pcdh19Q80TF3 Hnrnpf-209ENSMUST00000180020 2280 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Pcdh19Q80TF3 Runx1-202ENSMUST00000113956 4738 ntAPPRIS P3 TSL 1 (best) BASIC11.74□□□□□ -0.53
Pcdh19Q80TF3 Klhl8-203ENSMUST00000112815 2898 ntTSL 5 BASIC11.73□□□□□ -0.53
Pcdh19Q80TF3 Otop1-201ENSMUST00000063136 3106 ntAPPRIS ALT2 TSL 5 BASIC11.73□□□□□ -0.53
Pcdh19Q80TF3 Ptpn1-201ENSMUST00000029053 4213 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Pcdh19Q80TF3 Hltf-201ENSMUST00000002502 4955 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Pcdh19Q80TF3 Zfp532-202ENSMUST00000169679 5003 ntTSL 5 BASIC11.73□□□□□ -0.53
Pcdh19Q80TF3 Bcl2l15-202ENSMUST00000106822 1902 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Pcdh19Q80TF3 Krtap4-8-201ENSMUST00000107439 983 ntAPPRIS P1 BASIC11.73□□□□□ -0.53
Pcdh19Q80TF3 Prkcd-204ENSMUST00000112206 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC11.73□□□□□ -0.53
Pcdh19Q80TF3 Kalrn-209ENSMUST00000114963 3207 ntTSL 5 BASIC11.73□□□□□ -0.53
Pcdh19Q80TF3 Ldha-ps2-201ENSMUST00000118722 1057 ntBASIC11.73□□□□□ -0.53
Pcdh19Q80TF3 Gm15884-201ENSMUST00000143765 643 ntTSL 3 BASIC11.73□□□□□ -0.53
Pcdh19Q80TF3 Mff-209ENSMUST00000160972 1358 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Pcdh19Q80TF3 Rnh1-202ENSMUST00000167493 1656 ntAPPRIS P3 TSL 1 (best) BASIC11.73□□□□□ -0.53
Pcdh19Q80TF3 Kif1a-203ENSMUST00000171556 5391 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Pcdh19Q80TF3 Psap-204ENSMUST00000177779 2657 ntAPPRIS ALT2 TSL 5 BASIC11.73□□□□□ -0.53
Pcdh19Q80TF3 Rpl31-202ENSMUST00000178079 487 ntAPPRIS P1 TSL 2 BASIC11.73□□□□□ -0.53
Pcdh19Q80TF3 Psap-205ENSMUST00000179238 2657 ntAPPRIS P3 TSL 5 BASIC11.73□□□□□ -0.53
Pcdh19Q80TF3 Gm19353-201ENSMUST00000184561 445 ntBASIC11.73□□□□□ -0.53
Pcdh19Q80TF3 Gm37246-201ENSMUST00000192665 835 ntBASIC11.73□□□□□ -0.53
Pcdh19Q80TF3 Gm38228-201ENSMUST00000193169 1293 ntBASIC11.73□□□□□ -0.53
Pcdh19Q80TF3 Gm42626-201ENSMUST00000196866 1148 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Pcdh19Q80TF3 Gm35986-201ENSMUST00000197370 655 ntTSL 2 BASIC11.73□□□□□ -0.53
Pcdh19Q80TF3 Gimap3-202ENSMUST00000204036 2145 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Pcdh19Q80TF3 Gm45765-201ENSMUST00000212027 1035 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Pcdh19Q80TF3 AC153929.1-201ENSMUST00000219009 303 ntBASIC11.73□□□□□ -0.53
Pcdh19Q80TF3 AC125117.2-201ENSMUST00000228344 1140 ntBASIC11.73□□□□□ -0.53
Pcdh19Q80TF3 Capn3-201ENSMUST00000028748 2606 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Pcdh19Q80TF3 Psap-201ENSMUST00000004316 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC11.73□□□□□ -0.53
Pcdh19Q80TF3 Lmbr1-201ENSMUST00000055195 4926 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Pcdh19Q80TF3 Ccdc89-201ENSMUST00000061391 2093 ntAPPRIS P1 BASIC11.73□□□□□ -0.53
Pcdh19Q80TF3 Pde4d-201ENSMUST00000074103 2167 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Pcdh19Q80TF3 Strada-201ENSMUST00000007444 2099 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Pcdh19Q80TF3 Hrct1-201ENSMUST00000095109 1452 ntAPPRIS P1 BASIC11.73□□□□□ -0.53
Pcdh19Q80TF3 Hpse2-201ENSMUST00000099428 1779 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Pcdh19Q80TF3 Gm26684-202ENSMUST00000228229 8257 ntBASIC11.73□□□□□ -0.53
Pcdh19Q80TF3 Zc3h12d-201ENSMUST00000039484 4092 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Pcdh19Q80TF3 Rfx1-204ENSMUST00000211046 3677 ntAPPRIS ALT2 TSL 5 BASIC11.73□□□□□ -0.53
Pcdh19Q80TF3 Fndc3b-201ENSMUST00000046157 6875 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Pcdh19Q80TF3 Pycr1-206ENSMUST00000170556 2914 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Pcdh19Q80TF3 Gm20633-201ENSMUST00000176742 2831 ntBASIC11.73□□□□□ -0.53
Pcdh19Q80TF3 Rpl9-204ENSMUST00000127874 2690 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Pcdh19Q80TF3 Tcf4-250ENSMUST00000202458 2610 ntTSL 5 BASIC11.73□□□□□ -0.53
Pcdh19Q80TF3 Rbm39-217ENSMUST00000146297 2580 ntAPPRIS ALT1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Pcdh19Q80TF3 4732471J01Rik-204ENSMUST00000206436 2430 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Pcdh19Q80TF3 Crybg2-201ENSMUST00000121391 4761 ntAPPRIS P2 TSL 1 (best) BASIC11.72□□□□□ -0.53
Pcdh19Q80TF3 Ttc25-202ENSMUST00000092684 2240 ntAPPRIS P2 TSL 1 (best) BASIC11.72□□□□□ -0.53
Pcdh19Q80TF3 Cyb561d1-201ENSMUST00000065664 4058 ntAPPRIS ALT1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Pcdh19Q80TF3 Usp3-211ENSMUST00000174387 1901 ntTSL 5 BASIC11.72□□□□□ -0.53
Pcdh19Q80TF3 Polrmt-201ENSMUST00000020580 3755 ntAPPRIS P2 TSL 1 (best) BASIC11.72□□□□□ -0.53
Pcdh19Q80TF3 Gm43463-201ENSMUST00000195967 1803 ntBASIC11.72□□□□□ -0.53
Pcdh19Q80TF3 Ccng1-201ENSMUST00000020576 3512 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Pcdh19Q80TF3 Hr-205ENSMUST00000163060 5278 ntAPPRIS ALT2 TSL 5 BASIC11.72□□□□□ -0.53
Pcdh19Q80TF3 Celf2-205ENSMUST00000114927 1721 ntAPPRIS ALT1 TSL 5 BASIC11.72□□□□□ -0.53
Pcdh19Q80TF3 Gm29480-201ENSMUST00000188589 1655 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Pcdh19Q80TF3 Tcof1-202ENSMUST00000175934 4595 ntAPPRIS ALT2 TSL 2 BASIC11.72□□□□□ -0.53
Pcdh19Q80TF3 Sh3bp2-202ENSMUST00000101316 3031 ntAPPRIS ALT2 TSL 1 (best) BASIC11.72□□□□□ -0.53
Pcdh19Q80TF3 Rnf14-201ENSMUST00000072376 3038 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Pcdh19Q80TF3 Zfp710-202ENSMUST00000164056 5871 ntAPPRIS P4 TSL 1 (best) BASIC11.72□□□□□ -0.53
Pcdh19Q80TF3 Dgkb-205ENSMUST00000221176 1439 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Pcdh19Q80TF3 Rdh8-201ENSMUST00000066387 1405 ntAPPRIS P1 TSL 2 BASIC11.72□□□□□ -0.53
Pcdh19Q80TF3 Tmcc2-206ENSMUST00000142609 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC11.72□□□□□ -0.53
Pcdh19Q80TF3 6030458C11Rik-201ENSMUST00000057256 3966 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Pcdh19Q80TF3 Adam12-201ENSMUST00000067680 7675 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Pcdh19Q80TF3 Dmrtc1a-202ENSMUST00000119624 1149 ntAPPRIS ALT2 TSL 5 BASIC11.72□□□□□ -0.53
Pcdh19Q80TF3 Gm6506-201ENSMUST00000119775 1136 ntBASIC11.72□□□□□ -0.53
Pcdh19Q80TF3 Sec11a-204ENSMUST00000120285 875 ntTSL 3 BASIC11.72□□□□□ -0.53
Pcdh19Q80TF3 Rpl28-ps1-201ENSMUST00000121497 414 ntBASIC11.72□□□□□ -0.53
Pcdh19Q80TF3 Gm10051-201ENSMUST00000145209 414 ntBASIC11.72□□□□□ -0.53
Pcdh19Q80TF3 Gm11683-201ENSMUST00000147006 918 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Pcdh19Q80TF3 Smim5-203ENSMUST00000152171 1113 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Pcdh19Q80TF3 Gm16172-201ENSMUST00000156224 682 ntTSL 3 BASIC11.72□□□□□ -0.53
Pcdh19Q80TF3 Gm9550-201ENSMUST00000161130 862 ntBASIC11.72□□□□□ -0.53
Pcdh19Q80TF3 Gm16973-201ENSMUST00000180682 1299 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Pcdh19Q80TF3 Gm9211-201ENSMUST00000182882 975 ntBASIC11.72□□□□□ -0.53
Pcdh19Q80TF3 Smim22-207ENSMUST00000184439 382 ntAPPRIS P3 TSL 2 BASIC11.72□□□□□ -0.53
Pcdh19Q80TF3 Gm27184-201ENSMUST00000185095 607 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Pcdh19Q80TF3 Gm5733-201ENSMUST00000190232 939 ntBASIC11.72□□□□□ -0.53
Pcdh19Q80TF3 Rbakdn-201ENSMUST00000198334 520 ntTSL 2 BASIC11.72□□□□□ -0.53
Pcdh19Q80TF3 AC151275.1-201ENSMUST00000224870 585 ntBASIC11.72□□□□□ -0.53
Retrieved 100 of 76,532 protein–RNA pairs in 101.1 ms