Protein–RNA interactions for Protein: Q6PE01

Snrnp40, U5 small nuclear ribonucleoprotein 40 kDa protein, mousemouse

Predictions only

Length 358 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Snrnp40Q6PE01 Gm9508-201ENSMUST00000220084 693 ntAPPRIS P1 BASIC10.49□□□□□ -0.73
Snrnp40Q6PE01 Tmem220-202ENSMUST00000079077 1147 ntAPPRIS P3 TSL 1 (best) BASIC10.49□□□□□ -0.73
Snrnp40Q6PE01 Rnf183-201ENSMUST00000079420 573 ntAPPRIS P1 BASIC10.49□□□□□ -0.73
Snrnp40Q6PE01 Prkag3-202ENSMUST00000113672 2003 ntTSL 1 (best) BASIC10.49□□□□□ -0.73
Snrnp40Q6PE01 Tktl2-201ENSMUST00000002025 2021 ntAPPRIS P1 BASIC10.49□□□□□ -0.73
Snrnp40Q6PE01 Rita1-207ENSMUST00000177800 1668 ntAPPRIS P1 TSL 5 BASIC10.49□□□□□ -0.73
Snrnp40Q6PE01 Cad-206ENSMUST00000201838 3153 ntTSL 1 (best) BASIC10.49□□□□□ -0.73
Snrnp40Q6PE01 Ubqln1-202ENSMUST00000076454 3561 ntAPPRIS P3 TSL 1 (best) BASIC10.49□□□□□ -0.73
Snrnp40Q6PE01 Clec4a3-201ENSMUST00000088468 1300 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Snrnp40Q6PE01 Mapk3-203ENSMUST00000091328 1716 ntTSL 1 (best) BASIC10.49□□□□□ -0.73
Snrnp40Q6PE01 Erg-203ENSMUST00000113848 2139 ntTSL 1 (best) BASIC10.49□□□□□ -0.73
Snrnp40Q6PE01 M6pr-202ENSMUST00000112610 2539 ntAPPRIS P1 TSL 5 BASIC10.49□□□□□ -0.73
Snrnp40Q6PE01 Rtbdn-202ENSMUST00000109740 1363 ntAPPRIS P2 TSL 1 (best) BASIC10.49□□□□□ -0.73
Snrnp40Q6PE01 Dnmbp-205ENSMUST00000212396 6100 ntAPPRIS P2 TSL 5 BASIC10.49□□□□□ -0.73
Snrnp40Q6PE01 Ankrd34a-201ENSMUST00000058943 2583 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Snrnp40Q6PE01 Amer2-201ENSMUST00000022561 10506 ntAPPRIS P1 BASIC10.49□□□□□ -0.73
Snrnp40Q6PE01 Dph6-201ENSMUST00000028640 2632 ntTSL 1 (best) BASIC10.49□□□□□ -0.73
Snrnp40Q6PE01 Riox2-206ENSMUST00000160571 2244 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Snrnp40Q6PE01 Tubb4a-201ENSMUST00000071135 2228 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Snrnp40Q6PE01 Erg-201ENSMUST00000077773 2232 ntTSL 1 (best) BASIC10.49□□□□□ -0.73
Snrnp40Q6PE01 Rufy2-203ENSMUST00000122231 2664 ntTSL 5 BASIC10.49□□□□□ -0.73
Snrnp40Q6PE01 Elovl6-202ENSMUST00000197070 2275 ntTSL 1 (best) BASIC10.49□□□□□ -0.73
Snrnp40Q6PE01 Cldn15-201ENSMUST00000001790 1850 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Snrnp40Q6PE01 Ceacam12-203ENSMUST00000108487 1495 ntAPPRIS ALT2 TSL 1 (best) BASIC10.49□□□□□ -0.73
Snrnp40Q6PE01 H2-T10-201ENSMUST00000166442 1481 ntAPPRIS P1 TSL 5 BASIC10.49□□□□□ -0.73
Snrnp40Q6PE01 Casc4-202ENSMUST00000089912 3602 ntTSL 1 (best) BASIC10.48□□□□□ -0.73
Snrnp40Q6PE01 Ccdc88c-201ENSMUST00000068411 7542 ntAPPRIS P2 TSL 1 (best) BASIC10.48□□□□□ -0.73
Snrnp40Q6PE01 Mfsd4a-207ENSMUST00000159038 1957 ntAPPRIS P2 TSL 5 BASIC10.48□□□□□ -0.73
Snrnp40Q6PE01 Naaa-201ENSMUST00000113102 2414 ntAPPRIS P3 TSL 1 (best) BASIC10.48□□□□□ -0.73
Snrnp40Q6PE01 Steap3-204ENSMUST00000112643 2873 ntTSL 1 (best) BASIC10.48□□□□□ -0.73
Snrnp40Q6PE01 Nat8f6-202ENSMUST00000174143 1571 ntAPPRIS P1 TSL 3 BASIC10.48□□□□□ -0.73
Snrnp40Q6PE01 Mier3-203ENSMUST00000109272 5279 ntAPPRIS P2 TSL 1 (best) BASIC10.48□□□□□ -0.73
Snrnp40Q6PE01 Atg7-212ENSMUST00000182902 2543 ntAPPRIS P3 TSL 2 BASIC10.48□□□□□ -0.73
Snrnp40Q6PE01 4933440M02Rik-202ENSMUST00000205794 1601 ntTSL 1 (best) BASIC10.48□□□□□ -0.73
Snrnp40Q6PE01 Zscan20-202ENSMUST00000097877 5364 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Snrnp40Q6PE01 Cdk11b-201ENSMUST00000067081 2595 ntAPPRIS P3 TSL 1 (best) BASIC10.48□□□□□ -0.73
Snrnp40Q6PE01 Lamc3-201ENSMUST00000028187 5871 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Snrnp40Q6PE01 Kars-202ENSMUST00000093120 2131 ntAPPRIS ALT2 TSL 1 (best) BASIC10.48□□□□□ -0.73
Snrnp40Q6PE01 Gm45266-201ENSMUST00000210111 2173 ntBASIC10.48□□□□□ -0.73
Snrnp40Q6PE01 Cercam-201ENSMUST00000047521 2715 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Snrnp40Q6PE01 Phf13-201ENSMUST00000055688 3205 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Snrnp40Q6PE01 Mtmr2-201ENSMUST00000034396 3788 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Snrnp40Q6PE01 BC052040-203ENSMUST00000166472 2770 ntTSL 1 (best) BASIC10.48□□□□□ -0.73
Snrnp40Q6PE01 Gm37348-201ENSMUST00000193104 1789 ntBASIC10.48□□□□□ -0.73
Snrnp40Q6PE01 Tpm1-201ENSMUST00000030185 1797 ntAPPRIS ALT1 TSL 2 BASIC10.48□□□□□ -0.73
Snrnp40Q6PE01 Rpl23-201ENSMUST00000103146 1059 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Snrnp40Q6PE01 Cenpx-203ENSMUST00000106154 873 ntTSL 2 BASIC10.48□□□□□ -0.73
Snrnp40Q6PE01 Gm13549-201ENSMUST00000118339 796 ntBASIC10.48□□□□□ -0.73
Snrnp40Q6PE01 Gm15615-201ENSMUST00000118876 198 ntBASIC10.48□□□□□ -0.73
Snrnp40Q6PE01 Rhox3d-ps-201ENSMUST00000119181 825 ntBASIC10.48□□□□□ -0.73
Snrnp40Q6PE01 Acat3-202ENSMUST00000160378 987 ntTSL 5 BASIC10.48□□□□□ -0.73
Snrnp40Q6PE01 Cd1d2-202ENSMUST00000192481 1131 ntTSL 1 (best) BASIC10.48□□□□□ -0.73
Snrnp40Q6PE01 Gm37013-201ENSMUST00000194544 313 ntAPPRIS P1 TSL 5 BASIC10.48□□□□□ -0.73
Snrnp40Q6PE01 Gm43778-201ENSMUST00000199438 199 ntBASIC10.48□□□□□ -0.73
Snrnp40Q6PE01 Crcp-204ENSMUST00000202163 931 ntTSL 2 BASIC10.48□□□□□ -0.73
Snrnp40Q6PE01 Gm18463-201ENSMUST00000207258 474 ntBASIC10.48□□□□□ -0.73
Snrnp40Q6PE01 Gm45758-201ENSMUST00000212448 1006 ntBASIC10.48□□□□□ -0.73
Snrnp40Q6PE01 AC098716.1-201ENSMUST00000213527 703 ntBASIC10.48□□□□□ -0.73
Snrnp40Q6PE01 AC164105.2-201ENSMUST00000215484 524 ntTSL 5 BASIC10.48□□□□□ -0.73
Snrnp40Q6PE01 Gm7940-201ENSMUST00000218195 769 ntBASIC10.48□□□□□ -0.73
Snrnp40Q6PE01 AC126799.1-201ENSMUST00000221976 246 ntBASIC10.48□□□□□ -0.73
Snrnp40Q6PE01 AC129308.3-201ENSMUST00000225652 524 ntBASIC10.48□□□□□ -0.73
Snrnp40Q6PE01 Ly6i-201ENSMUST00000023250 1156 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Snrnp40Q6PE01 Tex35-201ENSMUST00000027884 909 ntAPPRIS ALT2 TSL 1 (best) BASIC10.48□□□□□ -0.73
Snrnp40Q6PE01 Sapcd1-201ENSMUST00000040151 935 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Snrnp40Q6PE01 Mcts2-201ENSMUST00000062148 917 ntAPPRIS P1 BASIC10.48□□□□□ -0.73
Snrnp40Q6PE01 Uba52-201ENSMUST00000081940 541 ntAPPRIS P1 TSL 2 BASIC10.48□□□□□ -0.73
Snrnp40Q6PE01 Taar8b-201ENSMUST00000092654 1035 ntAPPRIS P1 BASIC10.48□□□□□ -0.73
Snrnp40Q6PE01 Zmat1-202ENSMUST00000113185 3378 ntAPPRIS ALT2 TSL 5 BASIC10.48□□□□□ -0.73
Snrnp40Q6PE01 Unc5d-201ENSMUST00000168630 9220 ntAPPRIS P3 TSL 1 (best) BASIC10.48□□□□□ -0.73
Snrnp40Q6PE01 5930430L01Rik-201ENSMUST00000145042 3994 ntTSL 1 (best) BASIC10.48□□□□□ -0.73
Snrnp40Q6PE01 Zeb2-202ENSMUST00000068415 5624 ntAPPRIS P2 TSL 1 (best) BASIC10.48□□□□□ -0.73
Snrnp40Q6PE01 Stk25-201ENSMUST00000027498 4249 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Snrnp40Q6PE01 Zfp593-201ENSMUST00000030644 1994 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Snrnp40Q6PE01 Zfp809-201ENSMUST00000072465 1425 ntAPPRIS P2 TSL 1 (best) BASIC10.48□□□□□ -0.73
Snrnp40Q6PE01 Gm8038-201ENSMUST00000164674 2044 ntBASIC10.48□□□□□ -0.73
Snrnp40Q6PE01 Cipc-208ENSMUST00000189246 1454 ntAPPRIS P2 TSL 2 BASIC10.48□□□□□ -0.73
Snrnp40Q6PE01 Sema6d-206ENSMUST00000103239 6225 ntAPPRIS P4 TSL 5 BASIC10.48□□□□□ -0.73
Snrnp40Q6PE01 Ube2q2-203ENSMUST00000122441 2081 ntAPPRIS ALT2 TSL 1 (best) BASIC10.48□□□□□ -0.73
Snrnp40Q6PE01 Ninl-201ENSMUST00000109896 5093 ntAPPRIS P1 TSL 5 BASIC10.48□□□□□ -0.73
Snrnp40Q6PE01 Zc3h12a-201ENSMUST00000036188 2755 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Snrnp40Q6PE01 Cfap52-201ENSMUST00000021287 2199 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Snrnp40Q6PE01 Wdfy2-201ENSMUST00000014691 6646 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Snrnp40Q6PE01 5033403F01Rik-201ENSMUST00000181376 1678 ntTSL 1 (best) BASIC10.47□□□□□ -0.73
Snrnp40Q6PE01 Abi2-205ENSMUST00000187709 1671 ntAPPRIS P1 TSL 5 BASIC10.47□□□□□ -0.73
Snrnp40Q6PE01 Fgf12-201ENSMUST00000100024 3065 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Snrnp40Q6PE01 Spsb1-201ENSMUST00000038562 3092 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Snrnp40Q6PE01 Fgfr1-203ENSMUST00000119398 3789 ntTSL 1 (best) BASIC10.47□□□□□ -0.73
Snrnp40Q6PE01 Atg16l1-203ENSMUST00000113190 3102 ntTSL 1 (best) BASIC10.47□□□□□ -0.73
Snrnp40Q6PE01 Pcdhgc3-201ENSMUST00000076807 4687 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Snrnp40Q6PE01 Gm12198-201ENSMUST00000154068 1809 ntTSL 1 (best) BASIC10.47□□□□□ -0.73
Snrnp40Q6PE01 Kcna1-201ENSMUST00000055168 4031 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Snrnp40Q6PE01 Dhx37-201ENSMUST00000169485 4760 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Snrnp40Q6PE01 Ptn-202ENSMUST00000201321 2558 ntTSL 1 (best) BASIC10.47□□□□□ -0.73
Snrnp40Q6PE01 Arcn1-201ENSMUST00000034607 4072 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Snrnp40Q6PE01 AC238940.1-201ENSMUST00000225106 1858 ntBASIC10.47□□□□□ -0.73
Snrnp40Q6PE01 Lin28a-201ENSMUST00000051674 3505 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Snrnp40Q6PE01 Prpf40a-206ENSMUST00000209364 2833 ntAPPRIS ALT2 TSL 5 BASIC10.47□□□□□ -0.73
Snrnp40Q6PE01 Csrnp1-201ENSMUST00000035101 2906 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Snrnp40Q6PE01 Gm10479-201ENSMUST00000101568 318 ntAPPRIS P1 TSL 5 BASIC10.47□□□□□ -0.73
Retrieved 100 of 76,532 protein–RNA pairs in 49.8 ms