Protein–RNA interactions for Protein: Q6NSQ5

Sp140, Sp140 nuclear body protein, mousemouse

Predictions only

Length 534 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sp140Q6NSQ5 Brwd1-202ENSMUST00000099502 8547 ntAPPRIS P2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Sp140Q6NSQ5 Trim45-204ENSMUST00000134993 2274 ntAPPRIS ALT2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Sp140Q6NSQ5 Gm5847-201ENSMUST00000178959 1595 ntBASIC12.09□□□□□ -0.47
Sp140Q6NSQ5 Slc22a4-201ENSMUST00000020586 2263 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Sp140Q6NSQ5 Zyg11a-201ENSMUST00000043793 2289 ntAPPRIS P2 TSL 5 BASIC12.09□□□□□ -0.47
Sp140Q6NSQ5 Neurod6-201ENSMUST00000044767 2150 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Sp140Q6NSQ5 E030013I19Rik-201ENSMUST00000148089 2754 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Sp140Q6NSQ5 Ankrd35-201ENSMUST00000048427 4052 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Sp140Q6NSQ5 Pdzk1-201ENSMUST00000058865 2406 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Sp140Q6NSQ5 Ptpn14-202ENSMUST00000097442 10746 ntAPPRIS P2 TSL 5 BASIC12.09□□□□□ -0.47
Sp140Q6NSQ5 Chmp3-201ENSMUST00000059462 2654 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Sp140Q6NSQ5 Mier3-201ENSMUST00000047412 4243 ntAPPRIS ALT2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Sp140Q6NSQ5 Gm18986-201ENSMUST00000216029 1986 ntBASIC12.09□□□□□ -0.47
Sp140Q6NSQ5 Grpel2-201ENSMUST00000062991 4030 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Sp140Q6NSQ5 Vcp-201ENSMUST00000030164 3316 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Sp140Q6NSQ5 Atl3-202ENSMUST00000170373 6474 ntAPPRIS ALT2 TSL 5 BASIC12.09□□□□□ -0.47
Sp140Q6NSQ5 Gm24255-201ENSMUST00000104481 128 ntBASIC12.09□□□□□ -0.47
Sp140Q6NSQ5 Prr29-202ENSMUST00000106816 771 ntAPPRIS P2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Sp140Q6NSQ5 Igf1-206ENSMUST00000122100 651 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Sp140Q6NSQ5 Gm13205-201ENSMUST00000123548 562 ntTSL 3 BASIC12.09□□□□□ -0.47
Sp140Q6NSQ5 Gm14019-201ENSMUST00000131514 403 ntTSL 3 BASIC12.09□□□□□ -0.47
Sp140Q6NSQ5 Gm15201-201ENSMUST00000136472 1210 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Sp140Q6NSQ5 Gm38341-201ENSMUST00000195357 515 ntBASIC12.09□□□□□ -0.47
Sp140Q6NSQ5 Hax1-205ENSMUST00000197767 1092 ntAPPRIS ALT2 TSL 5 BASIC12.09□□□□□ -0.47
Sp140Q6NSQ5 Gm43403-202ENSMUST00000198830 370 ntTSL 3 BASIC12.09□□□□□ -0.47
Sp140Q6NSQ5 Gm4607-201ENSMUST00000206649 577 ntBASIC12.09□□□□□ -0.47
Sp140Q6NSQ5 Gm45224-201ENSMUST00000208203 414 ntBASIC12.09□□□□□ -0.47
Sp140Q6NSQ5 Caly-204ENSMUST00000211283 975 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Sp140Q6NSQ5 Scoc-203ENSMUST00000212031 409 ntAPPRIS P3 TSL 1 (best) BASIC12.09□□□□□ -0.47
Sp140Q6NSQ5 Gm33056-201ENSMUST00000213234 1120 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Sp140Q6NSQ5 Gm4657-201ENSMUST00000213839 787 ntTSL 3 BASIC12.09□□□□□ -0.47
Sp140Q6NSQ5 Gm18615-201ENSMUST00000222919 1031 ntBASIC12.09□□□□□ -0.47
Sp140Q6NSQ5 Prg2-201ENSMUST00000028467 838 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Sp140Q6NSQ5 Pxt1-201ENSMUST00000051526 710 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Sp140Q6NSQ5 Olfr171-201ENSMUST00000079891 945 ntAPPRIS P2 BASIC12.09□□□□□ -0.47
Sp140Q6NSQ5 Strada-202ENSMUST00000103072 1517 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Sp140Q6NSQ5 Clec16a-203ENSMUST00000115823 2643 ntAPPRIS ALT2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Sp140Q6NSQ5 Tpm1-201ENSMUST00000030185 1797 ntAPPRIS ALT1 TSL 2 BASIC12.09□□□□□ -0.47
Sp140Q6NSQ5 Kdm2b-203ENSMUST00000086200 4999 ntAPPRIS ALT2 TSL 5 BASIC12.09□□□□□ -0.47
Sp140Q6NSQ5 Gm37014-201ENSMUST00000194723 2253 ntBASIC12.09□□□□□ -0.47
Sp140Q6NSQ5 Lsamp-208ENSMUST00000189358 2766 ntTSL 5 BASIC12.09□□□□□ -0.47
Sp140Q6NSQ5 Rnf180-205ENSMUST00000226044 3279 ntAPPRIS ALT2 BASIC12.09□□□□□ -0.47
Sp140Q6NSQ5 Ankrd33-201ENSMUST00000070875 1442 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Sp140Q6NSQ5 Trappc5-202ENSMUST00000207787 4411 ntAPPRIS P1 BASIC12.09□□□□□ -0.47
Sp140Q6NSQ5 Asph-202ENSMUST00000078139 6694 ntAPPRIS P3 TSL 1 (best) BASIC12.09□□□□□ -0.47
Sp140Q6NSQ5 4930432B10Rik-201ENSMUST00000181688 2085 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Sp140Q6NSQ5 Srsf5-205ENSMUST00000110356 1568 ntAPPRIS P3 TSL 5 BASIC12.09□□□□□ -0.47
Sp140Q6NSQ5 Ablim2-203ENSMUST00000114203 1333 ntTSL 5 BASIC12.09□□□□□ -0.47
Sp140Q6NSQ5 Tectb-202ENSMUST00000120936 1349 ntTSL 5 BASIC12.09□□□□□ -0.47
Sp140Q6NSQ5 Gm38100-201ENSMUST00000194391 1329 ntAPPRIS ALT2 BASIC12.09□□□□□ -0.47
Sp140Q6NSQ5 4931428F04Rik-201ENSMUST00000014981 3492 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Sp140Q6NSQ5 Sin3b-201ENSMUST00000004494 4115 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Sp140Q6NSQ5 Riox2-206ENSMUST00000160571 2244 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Sp140Q6NSQ5 Anks1b-224ENSMUST00000182960 3397 ntTSL 5 BASIC12.09□□□□□ -0.47
Sp140Q6NSQ5 D030068K23Rik-201ENSMUST00000180382 2617 ntTSL 2 BASIC12.08□□□□□ -0.47
Sp140Q6NSQ5 Gbf1-201ENSMUST00000026254 6450 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.47
Sp140Q6NSQ5 Rnf123-218ENSMUST00000178267 4309 ntAPPRIS P3 TSL 5 BASIC12.08□□□□□ -0.48
Sp140Q6NSQ5 AC129931.1-201ENSMUST00000228865 1861 ntBASIC12.08□□□□□ -0.48
Sp140Q6NSQ5 Psapl1-201ENSMUST00000052224 2548 ntAPPRIS P1 BASIC12.08□□□□□ -0.48
Sp140Q6NSQ5 Gm26857-201ENSMUST00000181580 3347 ntTSL 5 BASIC12.08□□□□□ -0.48
Sp140Q6NSQ5 Fn1-211ENSMUST00000187938 7965 ntAPPRIS ALT2 TSL 1 (best) BASIC12.08□□□□□ -0.48
Sp140Q6NSQ5 Kcna1-201ENSMUST00000055168 4031 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Sp140Q6NSQ5 Gm15609-201ENSMUST00000155610 2960 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Sp140Q6NSQ5 Tpcn2-201ENSMUST00000058022 2993 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Sp140Q6NSQ5 Rps6ka6-203ENSMUST00000096348 4151 ntAPPRIS ALT2 TSL 2 BASIC12.08□□□□□ -0.48
Sp140Q6NSQ5 Wdr45-203ENSMUST00000115688 1510 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Sp140Q6NSQ5 Stox2-209ENSMUST00000211882 9696 ntTSL 5 BASIC12.08□□□□□ -0.48
Sp140Q6NSQ5 Aurkaip1-202ENSMUST00000105591 773 ntAPPRIS P1 TSL 3 BASIC12.08□□□□□ -0.48
Sp140Q6NSQ5 Ppm1h-208ENSMUST00000162969 811 ntTSL 3 BASIC12.08□□□□□ -0.48
Sp140Q6NSQ5 Gm17105-201ENSMUST00000163715 652 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Sp140Q6NSQ5 Gm20470-201ENSMUST00000174654 331 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Sp140Q6NSQ5 Rpl36-ps4-201ENSMUST00000179601 354 ntAPPRIS P1 TSL 5 BASIC12.08□□□□□ -0.48
Sp140Q6NSQ5 Gm39929-201ENSMUST00000209672 693 ntTSL 3 BASIC12.08□□□□□ -0.48
Sp140Q6NSQ5 Calml4-207ENSMUST00000215968 526 ntTSL 2 BASIC12.08□□□□□ -0.48
Sp140Q6NSQ5 CT571245.2-201ENSMUST00000218421 305 ntBASIC12.08□□□□□ -0.48
Sp140Q6NSQ5 AC161537.1-201ENSMUST00000226199 1015 ntBASIC12.08□□□□□ -0.48
Sp140Q6NSQ5 Tnfrsf4-201ENSMUST00000030952 1030 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Sp140Q6NSQ5 Ctrb1-201ENSMUST00000034435 878 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Sp140Q6NSQ5 Klk1b27-201ENSMUST00000079859 889 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Sp140Q6NSQ5 Cox5a-201ENSMUST00000000090 645 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Sp140Q6NSQ5 Samd11-201ENSMUST00000179919 2610 ntAPPRIS P2 TSL 1 (best) BASIC12.08□□□□□ -0.48
Sp140Q6NSQ5 Serinc4-202ENSMUST00000110613 2240 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Sp140Q6NSQ5 Morf4l2-204ENSMUST00000113097 1825 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Sp140Q6NSQ5 Gm8146-201ENSMUST00000192106 1847 ntBASIC12.08□□□□□ -0.48
Sp140Q6NSQ5 Mmd2-201ENSMUST00000037048 3317 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Sp140Q6NSQ5 Emilin1-201ENSMUST00000031055 3852 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Sp140Q6NSQ5 Kdm5c-201ENSMUST00000082177 5520 ntAPPRIS ALT2 TSL 5 BASIC12.08□□□□□ -0.48
Sp140Q6NSQ5 Mfsd4b5-205ENSMUST00000170579 1554 ntAPPRIS P1 TSL 2 BASIC12.08□□□□□ -0.48
Sp140Q6NSQ5 C230014O12Rik-201ENSMUST00000134921 2668 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Sp140Q6NSQ5 G6pdx-201ENSMUST00000004327 2652 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Sp140Q6NSQ5 Mog-201ENSMUST00000102665 1704 ntAPPRIS P2 TSL 1 (best) BASIC12.08□□□□□ -0.48
Sp140Q6NSQ5 Tcf4-252ENSMUST00000202477 1873 ntTSL 5 BASIC12.08□□□□□ -0.48
Sp140Q6NSQ5 Acly-201ENSMUST00000007131 4393 ntAPPRIS P3 TSL 1 (best) BASIC12.08□□□□□ -0.48
Sp140Q6NSQ5 Ahsa2-202ENSMUST00000109539 3583 ntAPPRIS ALT2 TSL 1 (best) BASIC12.08□□□□□ -0.48
Sp140Q6NSQ5 D030045P18Rik-204ENSMUST00000215085 2186 ntTSL 5 BASIC12.08□□□□□ -0.48
Sp140Q6NSQ5 Foxn4-201ENSMUST00000044790 3016 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Sp140Q6NSQ5 Mbtps2-203ENSMUST00000112522 3891 ntTSL 2 BASIC12.08□□□□□ -0.48
Sp140Q6NSQ5 Hnrnph2-205ENSMUST00000113203 2315 ntAPPRIS P1 TSL 5 BASIC12.08□□□□□ -0.48
Sp140Q6NSQ5 Mbtps2-208ENSMUST00000179062 3890 ntAPPRIS P1 TSL 2 BASIC12.08□□□□□ -0.48
Sp140Q6NSQ5 Syncrip-210ENSMUST00000174391 6257 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Retrieved 100 of 76,532 protein–RNA pairs in 43.7 ms