Protein–RNA interactions for Protein: Q6IRT3

Parpbp, PCNA-interacting partner, mousemouse

Predictions only

Length 573 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ParpbpQ6IRT3 Iqsec1-201ENSMUST00000101151 6490 ntTSL 5 BASIC11.23□□□□□ -0.61
ParpbpQ6IRT3 Smim1-208ENSMUST00000143047 3373 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
ParpbpQ6IRT3 Med12l-203ENSMUST00000040846 3747 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
ParpbpQ6IRT3 Gm11564-201ENSMUST00000105055 691 ntAPPRIS P1 BASIC11.23□□□□□ -0.61
ParpbpQ6IRT3 Prox1os-201ENSMUST00000110279 828 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
ParpbpQ6IRT3 Mdk-ps1-201ENSMUST00000119782 321 ntBASIC11.23□□□□□ -0.61
ParpbpQ6IRT3 Gm14966-202ENSMUST00000129675 649 ntTSL 2 BASIC11.23□□□□□ -0.61
ParpbpQ6IRT3 Gm10863-201ENSMUST00000130745 438 ntTSL 3 BASIC11.23□□□□□ -0.61
ParpbpQ6IRT3 Gm13546-201ENSMUST00000135735 401 ntTSL 5 BASIC11.23□□□□□ -0.61
ParpbpQ6IRT3 Mymx-203ENSMUST00000178858 804 ntAPPRIS ALT2 TSL 1 (best) BASIC11.23□□□□□ -0.61
ParpbpQ6IRT3 Gm29856-201ENSMUST00000191905 1257 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
ParpbpQ6IRT3 Gm37259-201ENSMUST00000193903 849 ntBASIC11.23□□□□□ -0.61
ParpbpQ6IRT3 Gm42797-201ENSMUST00000197573 494 ntTSL 3 BASIC11.23□□□□□ -0.61
ParpbpQ6IRT3 Gm32633-201ENSMUST00000205726 587 ntTSL 3 BASIC11.23□□□□□ -0.61
ParpbpQ6IRT3 Gm44651-201ENSMUST00000207343 372 ntBASIC11.23□□□□□ -0.61
ParpbpQ6IRT3 AC158523.3-201ENSMUST00000220664 864 ntTSL 5 BASIC11.23□□□□□ -0.61
ParpbpQ6IRT3 Pex11b-201ENSMUST00000048766 1122 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
ParpbpQ6IRT3 Fbn2-201ENSMUST00000025497 10480 ntAPPRIS P1 TSL 5 BASIC11.23□□□□□ -0.61
ParpbpQ6IRT3 Papss1-201ENSMUST00000029666 2600 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
ParpbpQ6IRT3 Sec23a-201ENSMUST00000021375 4109 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
ParpbpQ6IRT3 Dpm2-203ENSMUST00000140592 1412 ntTSL 5 BASIC11.23□□□□□ -0.61
ParpbpQ6IRT3 Wnt3-201ENSMUST00000000127 3076 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
ParpbpQ6IRT3 Lig1-210ENSMUST00000165964 3166 ntAPPRIS P1 TSL 5 BASIC11.23□□□□□ -0.61
ParpbpQ6IRT3 Plod3-201ENSMUST00000004968 3280 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
ParpbpQ6IRT3 Tor3a-201ENSMUST00000079625 3285 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
ParpbpQ6IRT3 Tro-202ENSMUST00000087258 6559 ntAPPRIS P3 TSL 1 (best) BASIC11.23□□□□□ -0.61
ParpbpQ6IRT3 Pkib-203ENSMUST00000095668 3311 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
ParpbpQ6IRT3 Tbl2-204ENSMUST00000153183 7488 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
ParpbpQ6IRT3 Plcxd3-201ENSMUST00000061925 1851 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
ParpbpQ6IRT3 Pdcd1-201ENSMUST00000027507 1930 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
ParpbpQ6IRT3 Ttc7-202ENSMUST00000125875 3917 ntTSL 2 BASIC11.23□□□□□ -0.61
ParpbpQ6IRT3 Pdcd11-201ENSMUST00000072141 6041 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
ParpbpQ6IRT3 Rasal2-204ENSMUST00000132699 4013 ntAPPRIS ALT2 TSL 5 BASIC11.23□□□□□ -0.61
ParpbpQ6IRT3 Cds2-201ENSMUST00000089461 8073 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
ParpbpQ6IRT3 Rps6ka6-202ENSMUST00000082034 4170 ntAPPRIS P2 TSL 5 BASIC11.23□□□□□ -0.61
ParpbpQ6IRT3 Ercc8-201ENSMUST00000054835 2111 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
ParpbpQ6IRT3 Nme8-202ENSMUST00000091763 2122 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
ParpbpQ6IRT3 4732414G09Rik-201ENSMUST00000156243 2422 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
ParpbpQ6IRT3 Pcdh15-238ENSMUST00000193739 5034 ntAPPRIS ALT2 TSL 5 BASIC11.23□□□□□ -0.61
ParpbpQ6IRT3 Eif5a2-201ENSMUST00000060500 5027 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
ParpbpQ6IRT3 Zmynd8-220ENSMUST00000170272 5076 ntAPPRIS ALT2 TSL 1 (best) BASIC11.23□□□□□ -0.61
ParpbpQ6IRT3 Spata20-201ENSMUST00000041705 2627 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
ParpbpQ6IRT3 Ercc2-201ENSMUST00000062831 3578 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
ParpbpQ6IRT3 Trim35-201ENSMUST00000022623 3678 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
ParpbpQ6IRT3 Tacc2-201ENSMUST00000033141 3940 ntAPPRIS ALT2 TSL 5 BASIC11.22□□□□□ -0.61
ParpbpQ6IRT3 Sh3tc1-201ENSMUST00000070203 4549 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
ParpbpQ6IRT3 Slc9a1-201ENSMUST00000030669 4676 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
ParpbpQ6IRT3 Tnnt3-217ENSMUST00000105957 1028 ntAPPRIS ALT2 TSL 5 BASIC11.22□□□□□ -0.61
ParpbpQ6IRT3 Pygo2-202ENSMUST00000107413 2911 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
ParpbpQ6IRT3 Kalrn-209ENSMUST00000114963 3207 ntTSL 5 BASIC11.22□□□□□ -0.61
ParpbpQ6IRT3 Dixdc1-204ENSMUST00000118707 989 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
ParpbpQ6IRT3 Gm7722-201ENSMUST00000120646 741 ntBASIC11.22□□□□□ -0.61
ParpbpQ6IRT3 Gm12715-201ENSMUST00000121430 1128 ntBASIC11.22□□□□□ -0.61
ParpbpQ6IRT3 Rnf43-203ENSMUST00000121782 2640 ntTSL 5 BASIC11.22□□□□□ -0.61
ParpbpQ6IRT3 Sgce-209ENSMUST00000133306 1619 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
ParpbpQ6IRT3 Mitd1-205ENSMUST00000139725 1175 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
ParpbpQ6IRT3 Hnf4aos-203ENSMUST00000141329 839 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
ParpbpQ6IRT3 Gm15276-201ENSMUST00000145953 498 ntBASIC11.22□□□□□ -0.61
ParpbpQ6IRT3 Gm11379-201ENSMUST00000154678 381 ntTSL 3 BASIC11.22□□□□□ -0.61
ParpbpQ6IRT3 Gm26083-201ENSMUST00000157904 193 ntBASIC11.22□□□□□ -0.61
ParpbpQ6IRT3 Gm17040-201ENSMUST00000168672 548 ntTSL 3 BASIC11.22□□□□□ -0.61
ParpbpQ6IRT3 Gm10767-202ENSMUST00000168767 2067 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
ParpbpQ6IRT3 4931406C07Rik-203ENSMUST00000180339 2756 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
ParpbpQ6IRT3 Gm17276-201ENSMUST00000180839 2782 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
ParpbpQ6IRT3 Gm27390-201ENSMUST00000184516 176 ntBASIC11.22□□□□□ -0.61
ParpbpQ6IRT3 Gm9230-201ENSMUST00000188228 532 ntBASIC11.22□□□□□ -0.61
ParpbpQ6IRT3 Gm38569-201ENSMUST00000205476 2228 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
ParpbpQ6IRT3 Zbtb45-205ENSMUST00000210282 3908 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
ParpbpQ6IRT3 Caly-204ENSMUST00000211283 975 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
ParpbpQ6IRT3 Zfp809-206ENSMUST00000215902 1800 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
ParpbpQ6IRT3 Gm19994-201ENSMUST00000217086 586 ntBASIC11.22□□□□□ -0.61
ParpbpQ6IRT3 Gm46400-201ENSMUST00000222294 724 ntTSL 5 BASIC11.22□□□□□ -0.61
ParpbpQ6IRT3 Yae1d1-204ENSMUST00000222796 1382 ntTSL 5 BASIC11.22□□□□□ -0.61
ParpbpQ6IRT3 AC154404.1-201ENSMUST00000223601 2077 ntBASIC11.22□□□□□ -0.61
ParpbpQ6IRT3 Gm10782-202ENSMUST00000223775 1480 ntBASIC11.22□□□□□ -0.61
ParpbpQ6IRT3 AC166574.4-201ENSMUST00000227165 1937 ntBASIC11.22□□□□□ -0.61
ParpbpQ6IRT3 Tubgcp2-201ENSMUST00000026547 2960 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
ParpbpQ6IRT3 Npr2-201ENSMUST00000030191 3660 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
ParpbpQ6IRT3 4930569F06Rik-201ENSMUST00000036821 433 ntBASIC11.22□□□□□ -0.61
ParpbpQ6IRT3 Odf4-201ENSMUST00000038932 1078 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
ParpbpQ6IRT3 Tgfbr1-202ENSMUST00000044234 2861 ntAPPRIS ALT2 TSL 1 (best) BASIC11.22□□□□□ -0.61
ParpbpQ6IRT3 Wdr20rt-201ENSMUST00000046331 2228 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
ParpbpQ6IRT3 Tmem136-201ENSMUST00000061833 3503 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
ParpbpQ6IRT3 Slc24a4-201ENSMUST00000079020 2337 ntAPPRIS P2 TSL 1 (best) BASIC11.22□□□□□ -0.61
ParpbpQ6IRT3 Cryge-201ENSMUST00000087359 631 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
ParpbpQ6IRT3 Myo18a-205ENSMUST00000100794 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC11.22□□□□□ -0.61
ParpbpQ6IRT3 Txlna-202ENSMUST00000084264 4847 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
ParpbpQ6IRT3 Magel2-201ENSMUST00000080403 4631 ntAPPRIS P1 BASIC11.22□□□□□ -0.61
ParpbpQ6IRT3 Rapgef3-205ENSMUST00000129223 3750 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
ParpbpQ6IRT3 3110062M04Rik-201ENSMUST00000055097 3681 ntAPPRIS P3 TSL 1 (best) BASIC11.22□□□□□ -0.61
ParpbpQ6IRT3 Hkdc1-201ENSMUST00000020277 3517 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
ParpbpQ6IRT3 Vamp1-203ENSMUST00000100942 3011 ntAPPRIS ALT1 TSL 1 (best) BASIC11.22□□□□□ -0.61
ParpbpQ6IRT3 Atp1b2-201ENSMUST00000047889 2842 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
ParpbpQ6IRT3 Atg4c-203ENSMUST00000180278 2792 ntAPPRIS P1 TSL 5 BASIC11.22□□□□□ -0.61
ParpbpQ6IRT3 4930520O04Rik-202ENSMUST00000131898 2660 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
ParpbpQ6IRT3 Slit2-216ENSMUST00000174313 7734 ntAPPRIS ALT2 TSL 1 (best) BASIC11.22□□□□□ -0.61
ParpbpQ6IRT3 Lnx1-206ENSMUST00000121690 2302 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
ParpbpQ6IRT3 Pigc-201ENSMUST00000028021 2196 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
ParpbpQ6IRT3 Ggt1-201ENSMUST00000006508 2167 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
ParpbpQ6IRT3 Lrrc3-201ENSMUST00000057608 4296 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Retrieved 100 of 76,532 protein–RNA pairs in 63.8 ms