Protein–RNA interactions for Protein: Q6IFX4

Krt39, Keratin, type I cytoskeletal 39, mousemouse

Predictions only

Length 482 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Krt39Q6IFX4 Gm19710-201ENSMUST00000200257 640 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Krt39Q6IFX4 Gm10608-202ENSMUST00000213924 676 ntBASIC13.17□□□□□ -0.3
Krt39Q6IFX4 AC159896.2-201ENSMUST00000214753 269 ntBASIC13.17□□□□□ -0.3
Krt39Q6IFX4 AC154319.1-201ENSMUST00000216330 312 ntBASIC13.17□□□□□ -0.3
Krt39Q6IFX4 AL589735.1-201ENSMUST00000224353 270 ntBASIC13.17□□□□□ -0.3
Krt39Q6IFX4 Cxcr5-202ENSMUST00000179828 2824 ntAPPRIS P1 TSL 5 BASIC13.17□□□□□ -0.3
Krt39Q6IFX4 Dpyd-201ENSMUST00000039177 4492 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Krt39Q6IFX4 Gm14137-201ENSMUST00000069711 3067 ntAPPRIS P1 BASIC13.17□□□□□ -0.3
Krt39Q6IFX4 Ptgir-202ENSMUST00000144408 3305 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Krt39Q6IFX4 Taf6-203ENSMUST00000110937 2093 ntTSL 5 BASIC13.17□□□□□ -0.3
Krt39Q6IFX4 Dhx30-212ENSMUST00000197928 4441 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Krt39Q6IFX4 Usp22-201ENSMUST00000041683 4434 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Krt39Q6IFX4 Plxnb2-201ENSMUST00000060808 6394 ntAPPRIS P1 TSL 5 BASIC13.17□□□□□ -0.3
Krt39Q6IFX4 Pom121l2-201ENSMUST00000017126 2960 ntAPPRIS P4 BASIC13.17□□□□□ -0.3
Krt39Q6IFX4 Ttc30a2-201ENSMUST00000099995 2431 ntAPPRIS P1 BASIC13.17□□□□□ -0.3
Krt39Q6IFX4 Tmem129-201ENSMUST00000019439 2828 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Krt39Q6IFX4 Katnal2-207ENSMUST00000137354 1482 ntTSL 5 BASIC13.16□□□□□ -0.3
Krt39Q6IFX4 Gm10277-201ENSMUST00000092883 2295 ntAPPRIS P1 BASIC13.16□□□□□ -0.3
Krt39Q6IFX4 4933434E20Rik-206ENSMUST00000160640 2510 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Krt39Q6IFX4 Snap29-201ENSMUST00000023449 3429 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Krt39Q6IFX4 Wdcp-202ENSMUST00000085793 1992 ntAPPRIS ALT2 TSL 2 BASIC13.16□□□□□ -0.3
Krt39Q6IFX4 Nras-201ENSMUST00000029445 4470 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Krt39Q6IFX4 2310043M15Rik-201ENSMUST00000180967 1580 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Krt39Q6IFX4 Cacna1g-205ENSMUST00000107786 7984 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Krt39Q6IFX4 Sdr9c7-201ENSMUST00000047134 2868 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Krt39Q6IFX4 Grm5-201ENSMUST00000107263 3516 ntAPPRIS P3 TSL 1 (best) BASIC13.16□□□□□ -0.3
Krt39Q6IFX4 Mospd2-203ENSMUST00000112248 2487 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Krt39Q6IFX4 Cep97-203ENSMUST00000118500 3389 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Krt39Q6IFX4 Inpp4a-211ENSMUST00000168546 2964 ntTSL 5 BASIC13.16□□□□□ -0.3
Krt39Q6IFX4 Sox9-201ENSMUST00000000579 4135 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Krt39Q6IFX4 Gm42706-201ENSMUST00000199733 1910 ntBASIC13.16□□□□□ -0.3
Krt39Q6IFX4 Tmem215-201ENSMUST00000049655 4733 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Krt39Q6IFX4 Pigp-205ENSMUST00000113917 805 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Krt39Q6IFX4 Gm11793-201ENSMUST00000120433 981 ntBASIC13.16□□□□□ -0.3
Krt39Q6IFX4 Gm15610-201ENSMUST00000120584 195 ntBASIC13.16□□□□□ -0.3
Krt39Q6IFX4 Gm7722-201ENSMUST00000120646 741 ntBASIC13.16□□□□□ -0.3
Krt39Q6IFX4 Gm12050-201ENSMUST00000127483 615 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Krt39Q6IFX4 Hoxb5os-202ENSMUST00000150698 596 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Krt39Q6IFX4 Gm27206-201ENSMUST00000154038 979 ntTSL 5 BASIC13.16□□□□□ -0.3
Krt39Q6IFX4 Mfsd14b-203ENSMUST00000155487 3832 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Krt39Q6IFX4 Cd180-203ENSMUST00000170878 842 ntTSL 3 BASIC13.16□□□□□ -0.3
Krt39Q6IFX4 Cd180-205ENSMUST00000172138 518 ntTSL 2 BASIC13.16□□□□□ -0.3
Krt39Q6IFX4 2900093K20Rik-201ENSMUST00000190930 567 ntBASIC13.16□□□□□ -0.3
Krt39Q6IFX4 Gsdmcl-ps-204ENSMUST00000191285 637 ntTSL 3 BASIC13.16□□□□□ -0.3
Krt39Q6IFX4 Gm8176-201ENSMUST00000191297 1099 ntBASIC13.16□□□□□ -0.3
Krt39Q6IFX4 Gm43118-201ENSMUST00000199149 775 ntBASIC13.16□□□□□ -0.3
Krt39Q6IFX4 Rfxank-203ENSMUST00000212320 1121 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Krt39Q6IFX4 Gm5950-201ENSMUST00000213337 772 ntBASIC13.16□□□□□ -0.3
Krt39Q6IFX4 Morn3-201ENSMUST00000031437 1128 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Krt39Q6IFX4 4930442H23Rik-201ENSMUST00000056086 1245 ntAPPRIS P1 BASIC13.16□□□□□ -0.3
Krt39Q6IFX4 Tnc-202ENSMUST00000107371 2928 ntTSL 5 BASIC13.16□□□□□ -0.3
Krt39Q6IFX4 Tsku-201ENSMUST00000094161 2760 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Krt39Q6IFX4 1700003D09Rik-201ENSMUST00000141929 1389 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Krt39Q6IFX4 Hyal3-202ENSMUST00000148440 1380 ntAPPRIS P1 TSL 5 BASIC13.16□□□□□ -0.3
Krt39Q6IFX4 Gm3756-201ENSMUST00000169182 1355 ntBASIC13.16□□□□□ -0.3
Krt39Q6IFX4 Gm18222-201ENSMUST00000202416 1387 ntBASIC13.16□□□□□ -0.3
Krt39Q6IFX4 Nt5dc2-206ENSMUST00000227794 1858 ntAPPRIS ALT2 BASIC13.16□□□□□ -0.3
Krt39Q6IFX4 Kif1a-201ENSMUST00000086819 5097 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Krt39Q6IFX4 Trpv3-201ENSMUST00000049676 5835 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Krt39Q6IFX4 Mical1-202ENSMUST00000099934 3292 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Krt39Q6IFX4 Daxx-207ENSMUST00000174146 2424 ntAPPRIS P2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Krt39Q6IFX4 Herc4-201ENSMUST00000020258 3898 ntAPPRIS P2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Krt39Q6IFX4 Fam172a-201ENSMUST00000091459 3892 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Krt39Q6IFX4 Sephs1-201ENSMUST00000027973 5319 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Krt39Q6IFX4 Astn1-211ENSMUST00000195311 3642 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Krt39Q6IFX4 Gm6203-201ENSMUST00000209575 1342 ntBASIC13.15□□□□□ -0.3
Krt39Q6IFX4 D330041H03Rik-205ENSMUST00000181014 1903 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Krt39Q6IFX4 Creb3l2-201ENSMUST00000041093 7082 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Krt39Q6IFX4 H2-Q1-201ENSMUST00000073208 2024 ntAPPRIS P2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Krt39Q6IFX4 Gm36987-201ENSMUST00000194704 2979 ntBASIC13.15□□□□□ -0.3
Krt39Q6IFX4 Mamld1-202ENSMUST00000114629 3346 ntAPPRIS ALT2 TSL 5 BASIC13.15□□□□□ -0.3
Krt39Q6IFX4 Akap5-203ENSMUST00000172992 2711 ntAPPRIS ALT2 TSL 3 BASIC13.15□□□□□ -0.3
Krt39Q6IFX4 Nr5a2-202ENSMUST00000168126 3446 ntTSL 5 BASIC13.15□□□□□ -0.3
Krt39Q6IFX4 Tex45-203ENSMUST00000161680 1526 ntAPPRIS P1 TSL 5 BASIC13.15□□□□□ -0.3
Krt39Q6IFX4 Ikbkg-205ENSMUST00000114129 2222 ntAPPRIS P3 TSL 1 (best) BASIC13.15□□□□□ -0.3
Krt39Q6IFX4 Tax1bp1-201ENSMUST00000080723 3285 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Krt39Q6IFX4 Bdnf-205ENSMUST00000111045 3973 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Krt39Q6IFX4 Miga2-201ENSMUST00000077977 3381 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Krt39Q6IFX4 Gm10434-201ENSMUST00000101158 471 ntBASIC13.15□□□□□ -0.3
Krt39Q6IFX4 Gm25214-201ENSMUST00000104573 129 ntBASIC13.15□□□□□ -0.3
Krt39Q6IFX4 Aurkaip1-202ENSMUST00000105591 773 ntAPPRIS P1 TSL 3 BASIC13.15□□□□□ -0.3
Krt39Q6IFX4 Gm11531-201ENSMUST00000117614 555 ntBASIC13.15□□□□□ -0.3
Krt39Q6IFX4 Gm13205-201ENSMUST00000123548 562 ntTSL 3 BASIC13.15□□□□□ -0.3
Krt39Q6IFX4 Tex22-201ENSMUST00000012355 1267 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Krt39Q6IFX4 1700012C08Rik-201ENSMUST00000141554 363 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Krt39Q6IFX4 Gm16124-201ENSMUST00000146938 516 ntTSL 2 BASIC13.15□□□□□ -0.3
Krt39Q6IFX4 Mospd4-201ENSMUST00000180618 576 ntBASIC13.15□□□□□ -0.3
Krt39Q6IFX4 Gm27501-201ENSMUST00000183599 107 ntBASIC13.15□□□□□ -0.3
Krt39Q6IFX4 Mocs2-215ENSMUST00000184335 646 ntTSL 5 BASIC13.15□□□□□ -0.3
Krt39Q6IFX4 Gm28085-201ENSMUST00000189281 1137 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Krt39Q6IFX4 Gm28192-201ENSMUST00000189381 778 ntTSL 5 BASIC13.15□□□□□ -0.3
Krt39Q6IFX4 1700113H08Rik-202ENSMUST00000189456 974 ntTSL 5 BASIC13.15□□□□□ -0.3
Krt39Q6IFX4 Gm35986-201ENSMUST00000197370 655 ntTSL 2 BASIC13.15□□□□□ -0.3
Krt39Q6IFX4 4930504D19Rik-201ENSMUST00000204799 349 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Krt39Q6IFX4 Svip-203ENSMUST00000209193 487 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Krt39Q6IFX4 Gm18935-201ENSMUST00000212692 664 ntBASIC13.15□□□□□ -0.3
Krt39Q6IFX4 Pfas-201ENSMUST00000021282 6373 ntAPPRIS P1 TSL 5 BASIC13.15□□□□□ -0.3
Krt39Q6IFX4 AC163667.3-201ENSMUST00000225774 222 ntBASIC13.15□□□□□ -0.3
Krt39Q6IFX4 AC113031.8-201ENSMUST00000227856 631 ntBASIC13.15□□□□□ -0.3
Krt39Q6IFX4 Mcpt1-201ENSMUST00000022836 1014 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Retrieved 100 of 76,532 protein–RNA pairs in 93 ms