Protein–RNA interactions for Protein: Q640N4

Zfp248, Zinc finger protein 248, mousemouse

Predictions only

Length 576 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Zfp248Q640N4 Tnk1-201ENSMUST00000001626 2778 ntAPPRIS P2 TSL 1 (best) BASIC9.08□□□□□ -0.96
Zfp248Q640N4 Tat-201ENSMUST00000001720 2375 ntAPPRIS P1 TSL 1 (best) BASIC9.08□□□□□ -0.96
Zfp248Q640N4 Ehd3-201ENSMUST00000024860 3658 ntAPPRIS P1 TSL 1 (best) BASIC9.08□□□□□ -0.96
Zfp248Q640N4 Tspan32-201ENSMUST00000009396 1582 ntAPPRIS ALT2 TSL 1 (best) BASIC9.08□□□□□ -0.96
Zfp248Q640N4 Palld-202ENSMUST00000121200 4193 ntTSL 1 (best) BASIC9.08□□□□□ -0.96
Zfp248Q640N4 Syt15-202ENSMUST00000119693 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC9.08□□□□□ -0.96
Zfp248Q640N4 Zfp853-203ENSMUST00000212715 3133 ntAPPRIS ALT2 TSL 5 BASIC9.08□□□□□ -0.96
Zfp248Q640N4 Gm28036-202ENSMUST00000132494 5505 ntAPPRIS P5 TSL 2 BASIC9.08□□□□□ -0.96
Zfp248Q640N4 Nxph1-202ENSMUST00000160300 2815 ntAPPRIS P1 TSL 1 (best) BASIC9.08□□□□□ -0.96
Zfp248Q640N4 Atp1b2-201ENSMUST00000047889 2842 ntAPPRIS P1 TSL 1 (best) BASIC9.08□□□□□ -0.96
Zfp248Q640N4 Slc26a2-202ENSMUST00000146409 7814 ntAPPRIS P1 TSL 1 (best) BASIC9.08□□□□□ -0.96
Zfp248Q640N4 Slc44a1-204ENSMUST00000107647 2176 ntTSL 2 BASIC9.08□□□□□ -0.96
Zfp248Q640N4 Ccdc170-201ENSMUST00000019901 2151 ntAPPRIS P2 TSL 5 BASIC9.08□□□□□ -0.96
Zfp248Q640N4 Galnt10-201ENSMUST00000066987 4715 ntAPPRIS P1 TSL 1 (best) BASIC9.08□□□□□ -0.96
Zfp248Q640N4 Gm11531-201ENSMUST00000117614 555 ntBASIC9.08□□□□□ -0.96
Zfp248Q640N4 Gm15172-201ENSMUST00000118945 1046 ntBASIC9.08□□□□□ -0.96
Zfp248Q640N4 3110056K07Rik-202ENSMUST00000136690 1063 ntTSL 1 (best) BASIC9.08□□□□□ -0.96
Zfp248Q640N4 Gm13133-201ENSMUST00000143888 736 ntTSL 1 (best) BASIC9.08□□□□□ -0.96
Zfp248Q640N4 C230066G23Rik-201ENSMUST00000150195 650 ntTSL 1 (best) BASIC9.08□□□□□ -0.96
Zfp248Q640N4 Timm10b-208ENSMUST00000151193 1083 ntTSL 2 BASIC9.08□□□□□ -0.96
Zfp248Q640N4 Stx5a-219ENSMUST00000177373 995 ntTSL 5 BASIC9.08□□□□□ -0.96
Zfp248Q640N4 Gm10142-201ENSMUST00000179767 363 ntAPPRIS P1 BASIC9.08□□□□□ -0.96
Zfp248Q640N4 Gm26956-201ENSMUST00000182176 986 ntBASIC9.08□□□□□ -0.96
Zfp248Q640N4 Gm29396-201ENSMUST00000185659 716 ntBASIC9.08□□□□□ -0.96
Zfp248Q640N4 2810405F17Rik-201ENSMUST00000189334 1117 ntBASIC9.08□□□□□ -0.96
Zfp248Q640N4 Gm28172-201ENSMUST00000189880 506 ntTSL 3 BASIC9.08□□□□□ -0.96
Zfp248Q640N4 Gm37667-201ENSMUST00000193103 752 ntTSL 5 BASIC9.08□□□□□ -0.96
Zfp248Q640N4 Gm5950-201ENSMUST00000213337 772 ntBASIC9.08□□□□□ -0.96
Zfp248Q640N4 AC158523.3-201ENSMUST00000220664 864 ntTSL 5 BASIC9.08□□□□□ -0.96
Zfp248Q640N4 Itln1-201ENSMUST00000043094 1141 ntAPPRIS P1 TSL 1 (best) BASIC9.08□□□□□ -0.96
Zfp248Q640N4 Rnase2b-201ENSMUST00000075648 759 ntAPPRIS P1 BASIC9.08□□□□□ -0.96
Zfp248Q640N4 Lgals1-201ENSMUST00000089377 800 ntAPPRIS P1 TSL 1 (best) BASIC9.08□□□□□ -0.96
Zfp248Q640N4 Vmn1r197-201ENSMUST00000091734 897 ntAPPRIS P1 BASIC9.08□□□□□ -0.96
Zfp248Q640N4 Trappc11-201ENSMUST00000039061 4332 ntAPPRIS P1 TSL 1 (best) BASIC9.08□□□□□ -0.96
Zfp248Q640N4 Cdc37l1-201ENSMUST00000050148 5179 ntAPPRIS P2 TSL 1 (best) BASIC9.08□□□□□ -0.96
Zfp248Q640N4 Dixdc1-202ENSMUST00000117093 1613 ntTSL 1 (best) BASIC9.08□□□□□ -0.96
Zfp248Q640N4 G630016G05Rik-202ENSMUST00000156095 3398 ntTSL 1 (best) BASIC9.08□□□□□ -0.96
Zfp248Q640N4 Nicn1-201ENSMUST00000035227 2133 ntAPPRIS P1 TSL 1 (best) BASIC9.08□□□□□ -0.96
Zfp248Q640N4 Dsc2-201ENSMUST00000039247 4630 ntAPPRIS P3 TSL 1 (best) BASIC9.08□□□□□ -0.96
Zfp248Q640N4 Abhd18-203ENSMUST00000159774 4455 ntAPPRIS P1 TSL 5 BASIC9.08□□□□□ -0.96
Zfp248Q640N4 AC160410.1-201ENSMUST00000219298 1972 ntBASIC9.08□□□□□ -0.96
Zfp248Q640N4 Slc36a4-201ENSMUST00000061568 6539 ntAPPRIS P2 TSL 1 (best) BASIC9.08□□□□□ -0.96
Zfp248Q640N4 Slc45a4-201ENSMUST00000054266 4664 ntAPPRIS ALT2 TSL 5 BASIC9.08□□□□□ -0.96
Zfp248Q640N4 Pdcd11-201ENSMUST00000072141 6041 ntAPPRIS P1 TSL 1 (best) BASIC9.08□□□□□ -0.96
Zfp248Q640N4 Gm4864-201ENSMUST00000219894 1461 ntBASIC9.08□□□□□ -0.96
Zfp248Q640N4 Ghsr-201ENSMUST00000057186 4433 ntAPPRIS P1 TSL 1 (best) BASIC9.08□□□□□ -0.96
Zfp248Q640N4 Zfp629-201ENSMUST00000058038 6120 ntAPPRIS P1 TSL 1 (best) BASIC9.08□□□□□ -0.96
Zfp248Q640N4 Raph1-204ENSMUST00000140485 10024 ntAPPRIS P2 TSL 5 BASIC9.08□□□□□ -0.96
Zfp248Q640N4 Hk1-205ENSMUST00000130422 2916 ntAPPRIS ALT2 TSL 5 BASIC9.08□□□□□ -0.96
Zfp248Q640N4 Amz2-203ENSMUST00000103061 1832 ntAPPRIS P2 TSL 1 (best) BASIC9.08□□□□□ -0.96
Zfp248Q640N4 Gm37131-201ENSMUST00000192502 1561 ntBASIC9.07□□□□□ -0.96
Zfp248Q640N4 Rangap1-202ENSMUST00000170134 3002 ntAPPRIS P1 TSL 1 (best) BASIC9.07□□□□□ -0.96
Zfp248Q640N4 Rad54l-202ENSMUST00000102705 2780 ntAPPRIS P1 TSL 1 (best) BASIC9.07□□□□□ -0.96
Zfp248Q640N4 Flywch1-201ENSMUST00000045517 2798 ntAPPRIS P1 TSL 1 (best) BASIC9.07□□□□□ -0.96
Zfp248Q640N4 Olfr56-202ENSMUST00000102785 1930 ntTSL 1 (best) BASIC9.07□□□□□ -0.96
Zfp248Q640N4 Metap2-201ENSMUST00000047910 4424 ntAPPRIS P1 TSL 1 (best) BASIC9.07□□□□□ -0.96
Zfp248Q640N4 Trpv4-205ENSMUST00000112225 3226 ntAPPRIS P1 TSL 5 BASIC9.07□□□□□ -0.96
Zfp248Q640N4 Nfia-202ENSMUST00000075448 9526 ntAPPRIS P1 TSL 1 (best) BASIC9.07□□□□□ -0.96
Zfp248Q640N4 Trim35-201ENSMUST00000022623 3678 ntAPPRIS P1 TSL 1 (best) BASIC9.07□□□□□ -0.96
Zfp248Q640N4 Mmachc-201ENSMUST00000030453 2106 ntAPPRIS P1 TSL 1 (best) BASIC9.07□□□□□ -0.96
Zfp248Q640N4 Arhgef9-206ENSMUST00000113884 3784 ntTSL 5 BASIC9.07□□□□□ -0.96
Zfp248Q640N4 Lsg1-201ENSMUST00000117363 3180 ntAPPRIS P1 TSL 1 (best) BASIC9.07□□□□□ -0.96
Zfp248Q640N4 Rorc-204ENSMUST00000200009 1543 ntTSL 1 (best) BASIC9.07□□□□□ -0.96
Zfp248Q640N4 Gp2-202ENSMUST00000207887 1853 ntAPPRIS ALT2 TSL 1 (best) BASIC9.07□□□□□ -0.96
Zfp248Q640N4 Adarb1-204ENSMUST00000105406 6662 ntTSL 1 (best) BASIC9.07□□□□□ -0.96
Zfp248Q640N4 Taf1b-201ENSMUST00000075954 2209 ntAPPRIS P2 TSL 1 (best) BASIC9.07□□□□□ -0.96
Zfp248Q640N4 Rsl1-201ENSMUST00000021997 2591 ntAPPRIS P1 TSL 1 (best) BASIC9.07□□□□□ -0.96
Zfp248Q640N4 Tardbp-206ENSMUST00000105702 6425 ntTSL 5 BASIC9.07□□□□□ -0.96
Zfp248Q640N4 Zfp512-208ENSMUST00000202244 3045 ntTSL 1 (best) BASIC9.07□□□□□ -0.96
Zfp248Q640N4 AC093022.4-203ENSMUST00000228523 2657 ntBASIC9.07□□□□□ -0.96
Zfp248Q640N4 Mrpl55-203ENSMUST00000108785 792 ntAPPRIS P1 TSL 1 (best) BASIC9.07□□□□□ -0.96
Zfp248Q640N4 Rps2-ps9-201ENSMUST00000121414 817 ntBASIC9.07□□□□□ -0.96
Zfp248Q640N4 Gm13786-201ENSMUST00000122371 333 ntBASIC9.07□□□□□ -0.96
Zfp248Q640N4 Bcas1os1-201ENSMUST00000133586 1239 ntTSL 1 (best) BASIC9.07□□□□□ -0.96
Zfp248Q640N4 1700066O22Rik-203ENSMUST00000150994 961 ntTSL 1 (best) BASIC9.07□□□□□ -0.96
Zfp248Q640N4 Gm11379-201ENSMUST00000154678 381 ntTSL 3 BASIC9.07□□□□□ -0.96
Zfp248Q640N4 Gm15853-201ENSMUST00000160268 556 ntTSL 1 (best) BASIC9.07□□□□□ -0.96
Zfp248Q640N4 1700069L16Rik-203ENSMUST00000162388 706 ntAPPRIS ALT2 TSL 1 (best) BASIC9.07□□□□□ -0.96
Zfp248Q640N4 C1qtnf2-203ENSMUST00000173002 1147 ntAPPRIS ALT2 TSL 5 BASIC9.07□□□□□ -0.96
Zfp248Q640N4 1700031P21Rik-203ENSMUST00000191400 466 ntTSL 3 BASIC9.07□□□□□ -0.96
Zfp248Q640N4 Gm37424-201ENSMUST00000191727 561 ntBASIC9.07□□□□□ -0.96
Zfp248Q640N4 Gm31728-201ENSMUST00000192164 435 ntTSL 3 BASIC9.07□□□□□ -0.96
Zfp248Q640N4 Gm17931-201ENSMUST00000208132 634 ntBASIC9.07□□□□□ -0.96
Zfp248Q640N4 Gm19994-201ENSMUST00000217086 586 ntBASIC9.07□□□□□ -0.96
Zfp248Q640N4 Gm19309-201ENSMUST00000218295 205 ntBASIC9.07□□□□□ -0.96
Zfp248Q640N4 Prg2-201ENSMUST00000028467 838 ntAPPRIS P1 TSL 1 (best) BASIC9.07□□□□□ -0.96
Zfp248Q640N4 Gemin7-201ENSMUST00000051364 763 ntAPPRIS P1 TSL 1 (best) BASIC9.07□□□□□ -0.96
Zfp248Q640N4 Pcgf1-201ENSMUST00000092614 866 ntTSL 1 (best) BASIC9.07□□□□□ -0.96
Zfp248Q640N4 Inip-201ENSMUST00000095063 3237 ntAPPRIS P1 TSL 1 (best) BASIC9.07□□□□□ -0.96
Zfp248Q640N4 Pgbd5-203ENSMUST00000136892 1739 ntAPPRIS P2 TSL 5 BASIC9.07□□□□□ -0.96
Zfp248Q640N4 Mthfsd-210ENSMUST00000139782 1366 ntTSL 5 BASIC9.07□□□□□ -0.96
Zfp248Q640N4 Acsf3-202ENSMUST00000212781 2604 ntAPPRIS ALT2 TSL 2 BASIC9.07□□□□□ -0.96
Zfp248Q640N4 Tcf4-251ENSMUST00000202474 1810 ntTSL 5 BASIC9.07□□□□□ -0.96
Zfp248Q640N4 5033428I22Rik-201ENSMUST00000181638 2040 ntTSL 1 (best) BASIC9.07□□□□□ -0.96
Zfp248Q640N4 Scml2-201ENSMUST00000019101 4842 ntAPPRIS P3 TSL 1 (best) BASIC9.07□□□□□ -0.96
Zfp248Q640N4 Grin1-208ENSMUST00000114318 3920 ntTSL 5 BASIC9.07□□□□□ -0.96
Zfp248Q640N4 Tcf25-202ENSMUST00000108840 2582 ntAPPRIS ALT2 TSL 1 (best) BASIC9.07□□□□□ -0.96
Zfp248Q640N4 Ehbp1l1-202ENSMUST00000075606 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC9.07□□□□□ -0.96
Zfp248Q640N4 Ikzf4-203ENSMUST00000221150 2213 ntTSL 1 (best) BASIC9.07□□□□□ -0.96
Zfp248Q640N4 Tmem41b-202ENSMUST00000118429 2774 ntAPPRIS P1 TSL 1 (best) BASIC9.07□□□□□ -0.96
Retrieved 100 of 76,532 protein–RNA pairs in 57.1 ms