Protein–RNA interactions for Protein: Q62205

Scn9a, Sodium channel protein type 9 subunit alpha, mousemouse

Predictions only

Length 1,984 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn9aQ62205 Gm15528-201ENSMUST00000117821 864 ntBASIC13.79□□□□□ -0.2
Scn9aQ62205 Csf1-204ENSMUST00000120654 821 ntTSL 3 BASIC13.79□□□□□ -0.2
Scn9aQ62205 Gm23694-201ENSMUST00000179335 110 ntBASIC13.79□□□□□ -0.2
Scn9aQ62205 Nme6-214ENSMUST00000200468 865 ntAPPRIS P1 TSL 2 BASIC13.79□□□□□ -0.2
Scn9aQ62205 Adipoq-201ENSMUST00000023593 1292 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Scn9aQ62205 Rhox8-201ENSMUST00000071885 1204 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Scn9aQ62205 Olfr1419-202ENSMUST00000213954 2918 ntAPPRIS P1 TSL 5 BASIC13.79□□□□□ -0.2
Scn9aQ62205 Hsph1-205ENSMUST00000201452 3140 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Scn9aQ62205 Tbkbp1-201ENSMUST00000066078 3338 ntAPPRIS ALT2 TSL 5 BASIC13.79□□□□□ -0.2
Scn9aQ62205 Gins2-201ENSMUST00000034278 3900 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Scn9aQ62205 Wdr25-202ENSMUST00000167816 2657 ntAPPRIS P1 TSL 5 BASIC13.79□□□□□ -0.2
Scn9aQ62205 Papss1-201ENSMUST00000029666 2600 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Scn9aQ62205 Mb21d1-201ENSMUST00000034898 3231 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Scn9aQ62205 Ppp2r5c-205ENSMUST00000221715 2367 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Scn9aQ62205 Th-202ENSMUST00000105929 1950 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Scn9aQ62205 Hspa4l-201ENSMUST00000108086 2744 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Scn9aQ62205 Ppara-203ENSMUST00000109423 2519 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Scn9aQ62205 A130077B15Rik-201ENSMUST00000219429 2547 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Scn9aQ62205 Padi6-201ENSMUST00000038749 2333 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Scn9aQ62205 Gm8522-201ENSMUST00000118416 1929 ntBASIC13.79□□□□□ -0.2
Scn9aQ62205 9430015G10Rik-202ENSMUST00000105576 1329 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Scn9aQ62205 Islr-202ENSMUST00000168864 2076 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Scn9aQ62205 Ly6e-210ENSMUST00000188866 2068 ntAPPRIS P1 TSL 3 BASIC13.78□□□□□ -0.2
Scn9aQ62205 Qrfpr-203ENSMUST00000197447 1690 ntTSL 5 BASIC13.78□□□□□ -0.2
Scn9aQ62205 Acnat2-201ENSMUST00000081541 1664 ntAPPRIS P2 TSL 1 (best) BASIC13.78□□□□□ -0.2
Scn9aQ62205 Stau1-204ENSMUST00000109238 2976 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
Scn9aQ62205 Ntm-202ENSMUST00000115236 1072 ntTSL 5 BASIC13.78□□□□□ -0.2
Scn9aQ62205 Gm14034-201ENSMUST00000120147 551 ntBASIC13.78□□□□□ -0.2
Scn9aQ62205 Gm16459-201ENSMUST00000121443 686 ntBASIC13.78□□□□□ -0.2
Scn9aQ62205 Gm13981-201ENSMUST00000122360 447 ntBASIC13.78□□□□□ -0.2
Scn9aQ62205 Gm12446-201ENSMUST00000123933 798 ntTSL 3 BASIC13.78□□□□□ -0.2
Scn9aQ62205 Mrpl20-202ENSMUST00000130188 442 ntTSL 3 BASIC13.78□□□□□ -0.2
Scn9aQ62205 Gm6331-201ENSMUST00000217890 450 ntBASIC13.78□□□□□ -0.2
Scn9aQ62205 Cars-201ENSMUST00000010899 3222 ntAPPRIS P3 TSL 1 (best) BASIC13.78□□□□□ -0.2
Scn9aQ62205 Dpp9-201ENSMUST00000038794 3374 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Scn9aQ62205 Alg12-204ENSMUST00000162183 2130 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Scn9aQ62205 Fam198a-204ENSMUST00000215990 2149 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Scn9aQ62205 Ttc8-201ENSMUST00000079146 2270 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Scn9aQ62205 Ikzf4-203ENSMUST00000221150 2213 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Scn9aQ62205 B3gat1-206ENSMUST00000161431 3858 ntAPPRIS P1 TSL 5 BASIC13.78□□□□□ -0.2
Scn9aQ62205 Fitm2-201ENSMUST00000109418 3967 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Scn9aQ62205 Irf1-202ENSMUST00000108920 2137 ntAPPRIS P3 TSL 1 (best) BASIC13.78□□□□□ -0.2
Scn9aQ62205 Mark2-215ENSMUST00000168872 2124 ntAPPRIS ALT2 TSL 5 BASIC13.78□□□□□ -0.2
Scn9aQ62205 H2afv-202ENSMUST00000109737 1633 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Scn9aQ62205 Anapc7-202ENSMUST00000119792 3599 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Scn9aQ62205 Rbm15-201ENSMUST00000061772 4343 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Scn9aQ62205 Pou2f2-209ENSMUST00000175774 7047 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
Scn9aQ62205 Gm15197-201ENSMUST00000120526 478 ntBASIC13.78□□□□□ -0.2
Scn9aQ62205 Mc5r-201ENSMUST00000172148 1162 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Scn9aQ62205 Gm6606-201ENSMUST00000193613 947 ntBASIC13.78□□□□□ -0.2
Scn9aQ62205 AC164087.2-201ENSMUST00000216206 1072 ntBASIC13.78□□□□□ -0.2
Scn9aQ62205 Fam228a-203ENSMUST00000220978 861 ntAPPRIS ALT2 TSL 5 BASIC13.78□□□□□ -0.2
Scn9aQ62205 CT030170.2-201ENSMUST00000223267 126 ntBASIC13.78□□□□□ -0.2
Scn9aQ62205 Ankfn1-201ENSMUST00000050983 2665 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Scn9aQ62205 Tpra1-218ENSMUST00000203185 1718 ntAPPRIS P1 TSL 5 BASIC13.78□□□□□ -0.2
Scn9aQ62205 Gm12200-201ENSMUST00000144876 1858 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Scn9aQ62205 Ankrd44-201ENSMUST00000044359 6192 ntAPPRIS ALT2 TSL 5 BASIC13.77□□□□□ -0.2
Scn9aQ62205 Oprm1-211ENSMUST00000105602 1366 ntTSL 1 (best) BASIC13.77□□□□□ -0.2
Scn9aQ62205 Gm33831-201ENSMUST00000211696 1542 ntTSL 5 BASIC13.77□□□□□ -0.2
Scn9aQ62205 Zfp568-203ENSMUST00000148442 4005 ntAPPRIS P3 TSL 1 (best) BASIC13.77□□□□□ -0.2
Scn9aQ62205 Srrt-209ENSMUST00000197466 2972 ntAPPRIS ALT2 TSL 5 BASIC13.77□□□□□ -0.2
Scn9aQ62205 Srrt-212ENSMUST00000199243 2988 ntAPPRIS ALT2 TSL 1 (best) BASIC13.77□□□□□ -0.2
Scn9aQ62205 Tcf4-243ENSMUST00000202057 1941 ntTSL 5 BASIC13.77□□□□□ -0.2
Scn9aQ62205 Raver1-202ENSMUST00000217282 4234 ntAPPRIS ALT2 TSL 2 BASIC13.77□□□□□ -0.2
Scn9aQ62205 Rgs16-201ENSMUST00000027748 2339 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.2
Scn9aQ62205 Sfxn3-203ENSMUST00000111954 2867 ntTSL 5 BASIC13.77□□□□□ -0.2
Scn9aQ62205 Col7a1-201ENSMUST00000026740 9198 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.2
Scn9aQ62205 Slc25a25-201ENSMUST00000028160 3294 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
Scn9aQ62205 Dcaf6-201ENSMUST00000027856 4110 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Scn9aQ62205 Mia-202ENSMUST00000121848 572 ntAPPRIS ALT2 TSL 1 (best) BASIC13.77□□□□□ -0.21
Scn9aQ62205 7420461P10Rik-201ENSMUST00000169439 781 ntAPPRIS P2 TSL 1 (best) BASIC13.77□□□□□ -0.21
Scn9aQ62205 1700001J11Rik-201ENSMUST00000185917 759 ntBASIC13.77□□□□□ -0.21
Scn9aQ62205 Gm19744-202ENSMUST00000186135 948 ntTSL 5 BASIC13.77□□□□□ -0.21
Scn9aQ62205 Gm43249-201ENSMUST00000200464 458 ntBASIC13.77□□□□□ -0.21
Scn9aQ62205 Gm5599-201ENSMUST00000209602 788 ntBASIC13.77□□□□□ -0.21
Scn9aQ62205 Capsl-202ENSMUST00000226688 739 ntBASIC13.77□□□□□ -0.21
Scn9aQ62205 Gm6564-201ENSMUST00000075377 619 ntBASIC13.77□□□□□ -0.21
Scn9aQ62205 Olfr538-201ENSMUST00000084457 933 ntAPPRIS P1 BASIC13.77□□□□□ -0.21
Scn9aQ62205 Itgb4-205ENSMUST00000106461 6208 ntAPPRIS ALT2 TSL 5 BASIC13.77□□□□□ -0.21
Scn9aQ62205 Arhgap39-201ENSMUST00000036176 4500 ntAPPRIS ALT2 TSL 5 BASIC13.77□□□□□ -0.21
Scn9aQ62205 Gm13561-201ENSMUST00000136879 1826 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
Scn9aQ62205 Stau2-206ENSMUST00000128957 3907 ntTSL 5 BASIC13.77□□□□□ -0.21
Scn9aQ62205 Npepps-219ENSMUST00000172108 2924 ntAPPRIS ALT2 TSL 5 BASIC13.77□□□□□ -0.21
Scn9aQ62205 C77080-202ENSMUST00000097873 5033 ntAPPRIS ALT2 TSL 1 (best) BASIC13.77□□□□□ -0.21
Scn9aQ62205 Arhgap11a-203ENSMUST00000110948 4878 ntAPPRIS ALT2 TSL 1 (best) BASIC13.77□□□□□ -0.21
Scn9aQ62205 Gm44831-201ENSMUST00000208469 2989 ntBASIC13.77□□□□□ -0.21
Scn9aQ62205 Cant1-201ENSMUST00000017620 4182 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Scn9aQ62205 Myzap-201ENSMUST00000093823 2283 ntAPPRIS P2 TSL 1 (best) BASIC13.77□□□□□ -0.21
Scn9aQ62205 Bag4-201ENSMUST00000038498 4876 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Scn9aQ62205 Gm37600-201ENSMUST00000193764 3292 ntBASIC13.77□□□□□ -0.21
Scn9aQ62205 Car10-201ENSMUST00000042943 3293 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Scn9aQ62205 Tia1-211ENSMUST00000130967 1445 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Scn9aQ62205 Fscn3-201ENSMUST00000031719 1902 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Scn9aQ62205 B2m-201ENSMUST00000102476 860 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Scn9aQ62205 Plac8-203ENSMUST00000112910 1224 ntAPPRIS P1 TSL 2 BASIC13.76□□□□□ -0.21
Scn9aQ62205 Gm11944-201ENSMUST00000152576 873 ntTSL 3 BASIC13.76□□□□□ -0.21
Scn9aQ62205 Gm11269-201ENSMUST00000157011 595 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Scn9aQ62205 Gm25569-201ENSMUST00000157175 131 ntBASIC13.76□□□□□ -0.21
Scn9aQ62205 Lockd-205ENSMUST00000185152 496 ntTSL 5 BASIC13.76□□□□□ -0.21
Scn9aQ62205 Gm6644-201ENSMUST00000186507 951 ntBASIC13.76□□□□□ -0.21
Retrieved 100 of 76,532 protein–RNA pairs in 63.2 ms