Protein–RNA interactions for Protein: Q61321

Six4, Homeobox protein SIX4, mousemouse

Predictions only

Length 775 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Six4Q61321 Crabp2-201ENSMUST00000005019 931 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Six4Q61321 Prr15l-202ENSMUST00000062172 1242 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Six4Q61321 Eef1d-203ENSMUST00000089680 973 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Six4Q61321 Zfp932-201ENSMUST00000099484 451 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Six4Q61321 Trpm1-221ENSMUST00000206706 2350 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Six4Q61321 Dab2ip-204ENSMUST00000112983 6051 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.49
Six4Q61321 Adgrg5-201ENSMUST00000074570 2802 ntAPPRIS P3 TSL 1 (best) BASIC12.02□□□□□ -0.49
Six4Q61321 Adh4-201ENSMUST00000013458 1314 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Six4Q61321 Prkar1b-202ENSMUST00000110889 2457 ntTSL 5 BASIC12.02□□□□□ -0.49
Six4Q61321 9330199G10Rik-202ENSMUST00000221607 1728 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Six4Q61321 Jak1-201ENSMUST00000102781 4906 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Six4Q61321 Tnfrsf13b-201ENSMUST00000010286 2556 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Six4Q61321 L3mbtl2-208ENSMUST00000174229 2578 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Six4Q61321 Ep400-202ENSMUST00000112433 3399 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Six4Q61321 Gm38194-201ENSMUST00000194529 2211 ntBASIC12.02□□□□□ -0.49
Six4Q61321 Gm8146-201ENSMUST00000192106 1847 ntBASIC12.02□□□□□ -0.49
Six4Q61321 Psmc3-201ENSMUST00000002171 1819 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Six4Q61321 Alg13-202ENSMUST00000070801 1802 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Six4Q61321 Adipor2-202ENSMUST00000169744 3489 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Six4Q61321 Wif1-201ENSMUST00000020439 2294 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Six4Q61321 Rtp4-202ENSMUST00000209422 1859 ntAPPRIS P1 TSL 5 BASIC12.02□□□□□ -0.49
Six4Q61321 Mtap-201ENSMUST00000058030 2797 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Six4Q61321 Vsx2-202ENSMUST00000169934 3249 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Six4Q61321 Rfx1-201ENSMUST00000005600 4172 ntAPPRIS P2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Six4Q61321 Gm13848-202ENSMUST00000211663 1560 ntTSL 5 BASIC12.01□□□□□ -0.49
Six4Q61321 Tmem230-203ENSMUST00000110164 2957 ntAPPRIS P1 TSL 2 BASIC12.01□□□□□ -0.49
Six4Q61321 4833439L19Rik-208ENSMUST00000153065 2502 ntTSL 5 BASIC12.01□□□□□ -0.49
Six4Q61321 Fads1-201ENSMUST00000010807 3456 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Six4Q61321 Tuft1-201ENSMUST00000006123 2631 ntAPPRIS P3 TSL 1 (best) BASIC12.01□□□□□ -0.49
Six4Q61321 Asap1-217ENSMUST00000177371 6164 ntAPPRIS ALT2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Six4Q61321 Tepsin-202ENSMUST00000093901 2770 ntAPPRIS P2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Six4Q61321 Ucp3-202ENSMUST00000107059 1260 ntAPPRIS P1 TSL 5 BASIC12.01□□□□□ -0.49
Six4Q61321 Pole-203ENSMUST00000112482 747 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Six4Q61321 Gm7857-201ENSMUST00000117957 358 ntBASIC12.01□□□□□ -0.49
Six4Q61321 Gm12217-201ENSMUST00000118858 696 ntBASIC12.01□□□□□ -0.49
Six4Q61321 Psma1-203ENSMUST00000135570 960 ntTSL 3 BASIC12.01□□□□□ -0.49
Six4Q61321 Prdx5-203ENSMUST00000149261 755 ntAPPRIS ALT2 TSL 2 BASIC12.01□□□□□ -0.49
Six4Q61321 Zdhhc4-208ENSMUST00000161915 1216 ntAPPRIS P1 TSL 5 BASIC12.01□□□□□ -0.49
Six4Q61321 Arf4os-201ENSMUST00000166902 566 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Six4Q61321 Ctdspl-202ENSMUST00000172464 798 ntAPPRIS ALT1 TSL 5 BASIC12.01□□□□□ -0.49
Six4Q61321 Gm16505-201ENSMUST00000179981 232 ntBASIC12.01□□□□□ -0.49
Six4Q61321 Gm28778-201ENSMUST00000190734 785 ntAPPRIS P1 TSL 3 BASIC12.01□□□□□ -0.49
Six4Q61321 Gm2762-206ENSMUST00000202502 335 ntTSL 3 BASIC12.01□□□□□ -0.49
Six4Q61321 Gm2762-208ENSMUST00000202976 568 ntTSL 3 BASIC12.01□□□□□ -0.49
Six4Q61321 Gm32850-202ENSMUST00000209149 732 ntTSL 5 BASIC12.01□□□□□ -0.49
Six4Q61321 AC133602.1-201ENSMUST00000227510 509 ntBASIC12.01□□□□□ -0.49
Six4Q61321 Cryba2-201ENSMUST00000006721 720 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Six4Q61321 Olfr887-201ENSMUST00000074681 930 ntAPPRIS P1 BASIC12.01□□□□□ -0.49
Six4Q61321 Lrmda-201ENSMUST00000075639 908 ntAPPRIS P2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Six4Q61321 Nxph1-202ENSMUST00000160300 2815 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Six4Q61321 Sf1-208ENSMUST00000131252 4353 ntAPPRIS P4 TSL 1 (best) BASIC12.01□□□□□ -0.49
Six4Q61321 Taf6-202ENSMUST00000110936 2308 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Six4Q61321 Synpo-211ENSMUST00000155195 4442 ntAPPRIS ALT2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Six4Q61321 Plxdc1-201ENSMUST00000017561 2881 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Six4Q61321 Ilvbl-212ENSMUST00000220430 2350 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Six4Q61321 Olfr139-204ENSMUST00000214111 1311 ntAPPRIS P1 TSL 5 BASIC12.01□□□□□ -0.49
Six4Q61321 Zfp335-201ENSMUST00000041361 4587 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Six4Q61321 Abcd1-201ENSMUST00000002084 3648 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Six4Q61321 Gm18986-201ENSMUST00000216029 1986 ntBASIC12.01□□□□□ -0.49
Six4Q61321 Lmna-201ENSMUST00000029699 3156 ntAPPRIS P3 TSL 1 (best) BASIC12.01□□□□□ -0.49
Six4Q61321 Clec16a-203ENSMUST00000115823 2643 ntAPPRIS ALT2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Six4Q61321 Med1-202ENSMUST00000092735 2627 ntAPPRIS ALT2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Six4Q61321 Crat-201ENSMUST00000028207 3833 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Six4Q61321 AC113441.2-201ENSMUST00000221538 1468 ntBASIC12.01□□□□□ -0.49
Six4Q61321 Psap-201ENSMUST00000004316 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Six4Q61321 Mzf1-205ENSMUST00000182515 3340 ntAPPRIS P2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Six4Q61321 Hbs1l-201ENSMUST00000020153 2793 ntAPPRIS ALT2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Six4Q61321 Mmp28-202ENSMUST00000103209 3438 ntAPPRIS ALT2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Six4Q61321 Pip5kl1-201ENSMUST00000055304 1577 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Six4Q61321 Aire-202ENSMUST00000105395 1630 ntTSL 1 (best) BASIC12□□□□□ -0.49
Six4Q61321 Wdr66-202ENSMUST00000121964 4873 ntAPPRIS P1 TSL 5 BASIC12□□□□□ -0.49
Six4Q61321 Hk1-205ENSMUST00000130422 2916 ntAPPRIS ALT2 TSL 5 BASIC12□□□□□ -0.49
Six4Q61321 Gng7-203ENSMUST00000117805 3382 ntAPPRIS ALT1 TSL 1 (best) BASIC12□□□□□ -0.49
Six4Q61321 Cyp4f40-201ENSMUST00000165061 1858 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Six4Q61321 Accs-202ENSMUST00000068513 1872 ntAPPRIS P3 TSL 5 BASIC12□□□□□ -0.49
Six4Q61321 H2-Q1-202ENSMUST00000105041 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC12□□□□□ -0.49
Six4Q61321 Dars2-201ENSMUST00000035430 3619 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Six4Q61321 Zfp536-201ENSMUST00000056338 4621 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Six4Q61321 Tmem50a-202ENSMUST00000105863 719 ntAPPRIS P1 TSL 3 BASIC12□□□□□ -0.49
Six4Q61321 Tnnt3-211ENSMUST00000105949 955 ntAPPRIS ALT2 TSL 5 BASIC12□□□□□ -0.49
Six4Q61321 Cstl1-201ENSMUST00000109952 629 ntAPPRIS P1 TSL 5 BASIC12□□□□□ -0.49
Six4Q61321 Fgf8-204ENSMUST00000111925 702 ntTSL 5 BASIC12□□□□□ -0.49
Six4Q61321 Gm12857-201ENSMUST00000117678 592 ntBASIC12□□□□□ -0.49
Six4Q61321 Fhit-201ENSMUST00000160340 1094 ntTSL 5 BASIC12□□□□□ -0.49
Six4Q61321 Gm17040-202ENSMUST00000170597 889 ntBASIC12□□□□□ -0.49
Six4Q61321 Smpd4-223ENSMUST00000172182 516 ntTSL 3 BASIC12□□□□□ -0.49
Six4Q61321 Stx5a-219ENSMUST00000177373 995 ntTSL 5 BASIC12□□□□□ -0.49
Six4Q61321 Fhit-208ENSMUST00000179394 453 ntAPPRIS P1 TSL 5 BASIC12□□□□□ -0.49
Six4Q61321 Gm38117-201ENSMUST00000194653 939 ntBASIC12□□□□□ -0.49
Six4Q61321 Mt3-202ENSMUST00000211915 440 ntTSL 3 BASIC12□□□□□ -0.49
Six4Q61321 CT485787.1-201ENSMUST00000225617 968 ntBASIC12□□□□□ -0.49
Six4Q61321 Tinf2-201ENSMUST00000007733 2956 ntAPPRIS P2 TSL 1 (best) BASIC12□□□□□ -0.49
Six4Q61321 Mir219a-1-201ENSMUST00000083621 110 ntBASIC12□□□□□ -0.49
Six4Q61321 Fen1-203ENSMUST00000142241 2152 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Six4Q61321 Pcdhb18-201ENSMUST00000055949 5041 ntAPPRIS P1 BASIC12□□□□□ -0.49
Six4Q61321 Poll-201ENSMUST00000026239 2324 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Six4Q61321 Ppip5k1-202ENSMUST00000110625 5226 ntAPPRIS ALT2 TSL 5 BASIC12□□□□□ -0.49
Six4Q61321 Rftn1-202ENSMUST00000113195 2385 ntTSL 1 (best) BASIC12□□□□□ -0.49
Six4Q61321 Mapt-204ENSMUST00000106992 5253 ntAPPRIS ALT2 TSL 1 (best) BASIC12□□□□□ -0.49
Six4Q61321 Nlrx1-202ENSMUST00000168499 3579 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Retrieved 100 of 76,532 protein–RNA pairs in 282.7 ms