Protein–RNA interactions for Protein: Q60847

Col12a1, Collagen alpha-1(XII) chain, mousemouse

Predictions only

Length 3,120 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col12a1Q60847 Ccdc78-201ENSMUST00000095500 1651 ntAPPRIS P1 TSL 5 BASIC11.46□□□□□ -0.58
Col12a1Q60847 Bcl2l11-204ENSMUST00000103211 672 ntAPPRIS ALT2 TSL 2 BASIC11.46□□□□□ -0.58
Col12a1Q60847 Capns1-202ENSMUST00000108196 1192 ntAPPRIS ALT2 TSL 1 (best) BASIC11.46□□□□□ -0.58
Col12a1Q60847 Gm16441-201ENSMUST00000138176 924 ntBASIC11.46□□□□□ -0.58
Col12a1Q60847 2310009A05Rik-201ENSMUST00000184126 496 ntTSL 1 (best) BASIC11.46□□□□□ -0.58
Col12a1Q60847 Gm4034-201ENSMUST00000187674 480 ntBASIC11.46□□□□□ -0.58
Col12a1Q60847 4930444A19Rik-202ENSMUST00000190007 633 ntTSL 1 (best) BASIC11.46□□□□□ -0.58
Col12a1Q60847 Gm42751-201ENSMUST00000198065 559 ntBASIC11.46□□□□□ -0.58
Col12a1Q60847 Gm6370-202ENSMUST00000198912 1017 ntAPPRIS ALT2 TSL 3 BASIC11.46□□□□□ -0.58
Col12a1Q60847 3930402G23Rik-202ENSMUST00000208615 581 ntTSL 3 BASIC11.46□□□□□ -0.58
Col12a1Q60847 AC137871.1-201ENSMUST00000228278 475 ntBASIC11.46□□□□□ -0.58
Col12a1Q60847 1600002K03Rik-201ENSMUST00000041882 678 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
Col12a1Q60847 Syngap1-202ENSMUST00000177932 3927 ntAPPRIS ALT2 TSL 5 BASIC11.46□□□□□ -0.58
Col12a1Q60847 A430018G15Rik-201ENSMUST00000124210 1314 ntTSL 1 (best) BASIC11.46□□□□□ -0.58
Col12a1Q60847 A230009B12Rik-202ENSMUST00000159602 1810 ntTSL 1 (best) BASIC11.46□□□□□ -0.58
Col12a1Q60847 Rps6kl1-202ENSMUST00000221972 2881 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
Col12a1Q60847 Shroom4-202ENSMUST00000103005 4839 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
Col12a1Q60847 Kif22-ps-201ENSMUST00000119302 1984 ntBASIC11.45□□□□□ -0.58
Col12a1Q60847 Acsl6-202ENSMUST00000064690 1988 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
Col12a1Q60847 Lcor-201ENSMUST00000067795 4810 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Col12a1Q60847 Cct6a-202ENSMUST00000201414 2454 ntTSL 5 BASIC11.45□□□□□ -0.58
Col12a1Q60847 Tatdn3-203ENSMUST00000110891 1214 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
Col12a1Q60847 Tatdn3-204ENSMUST00000110893 1242 ntAPPRIS P2 TSL 1 (best) BASIC11.45□□□□□ -0.58
Col12a1Q60847 Osgep-207ENSMUST00000162177 1219 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
Col12a1Q60847 Tex33-202ENSMUST00000165170 1072 ntAPPRIS P4 TSL 1 (best) BASIC11.45□□□□□ -0.58
Col12a1Q60847 Gm20441-201ENSMUST00000173512 756 ntAPPRIS P1 TSL 5 BASIC11.45□□□□□ -0.58
Col12a1Q60847 A830092H15Rik-202ENSMUST00000195446 649 ntTSL 3 BASIC11.45□□□□□ -0.58
Col12a1Q60847 Gm43811-201ENSMUST00000202862 695 ntBASIC11.45□□□□□ -0.58
Col12a1Q60847 Gm8268-201ENSMUST00000209683 458 ntBASIC11.45□□□□□ -0.58
Col12a1Q60847 Tex33-201ENSMUST00000074380 1147 ntAPPRIS P4 TSL 1 (best) BASIC11.45□□□□□ -0.58
Col12a1Q60847 Nr1i3-201ENSMUST00000005820 1414 ntAPPRIS P3 TSL 1 (best) BASIC11.45□□□□□ -0.58
Col12a1Q60847 Arrdc4-201ENSMUST00000048068 3905 ntAPPRIS P3 TSL 1 (best) BASIC11.45□□□□□ -0.58
Col12a1Q60847 Usp5-201ENSMUST00000047510 3213 ntAPPRIS P3 TSL 1 (best) BASIC11.45□□□□□ -0.58
Col12a1Q60847 Dlgap1-202ENSMUST00000097288 2626 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
Col12a1Q60847 Elf1-201ENSMUST00000040131 4235 ntAPPRIS P2 TSL 1 (best) BASIC11.45□□□□□ -0.58
Col12a1Q60847 5031439G07Rik-201ENSMUST00000047144 6845 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Col12a1Q60847 Spg20-202ENSMUST00000107971 3567 ntAPPRIS ALT2 TSL 1 (best) BASIC11.45□□□□□ -0.58
Col12a1Q60847 Ccdc81-201ENSMUST00000041195 2439 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Col12a1Q60847 Trav13d-4-201ENSMUST00000103607 264 ntAPPRIS P1 BASIC11.45□□□□□ -0.58
Col12a1Q60847 Mir453-201ENSMUST00000104732 82 ntBASIC11.45□□□□□ -0.58
Col12a1Q60847 Trav13-4-dv7-202ENSMUST00000184905 264 ntAPPRIS P1 BASIC11.45□□□□□ -0.58
Col12a1Q60847 Gm28826-201ENSMUST00000190006 488 ntTSL 2 BASIC11.45□□□□□ -0.58
Col12a1Q60847 AC115304.2-201ENSMUST00000226399 332 ntBASIC11.45□□□□□ -0.58
Col12a1Q60847 Lsm8-201ENSMUST00000056398 807 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Col12a1Q60847 Rnf170-201ENSMUST00000014022 3929 ntAPPRIS P2 TSL 1 (best) BASIC11.45□□□□□ -0.58
Col12a1Q60847 Gm26678-201ENSMUST00000181057 3025 ntTSL 5 BASIC11.45□□□□□ -0.58
Col12a1Q60847 Etv1-204ENSMUST00000160701 1578 ntTSL 5 BASIC11.45□□□□□ -0.58
Col12a1Q60847 Ppp2r1b-201ENSMUST00000034560 3647 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
Col12a1Q60847 Zp1-201ENSMUST00000025641 1963 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Col12a1Q60847 Tpgs2-201ENSMUST00000115817 4159 ntAPPRIS P3 TSL 1 (best) BASIC11.45□□□□□ -0.58
Col12a1Q60847 Hist1h4i-201ENSMUST00000102977 727 ntAPPRIS P1 BASIC11.44□□□□□ -0.58
Col12a1Q60847 Gm14829-201ENSMUST00000121499 1138 ntBASIC11.44□□□□□ -0.58
Col12a1Q60847 Gm12705-201ENSMUST00000129460 872 ntTSL 2 BASIC11.44□□□□□ -0.58
Col12a1Q60847 Hoxc5-201ENSMUST00000001709 2923 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Col12a1Q60847 Gm26841-201ENSMUST00000180725 1787 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
Col12a1Q60847 Rgs6-211ENSMUST00000191107 1621 ntTSL 5 BASIC11.44□□□□□ -0.58
Col12a1Q60847 AC166361.2-201ENSMUST00000219269 1415 ntBASIC11.44□□□□□ -0.58
Col12a1Q60847 AC124356.1-201ENSMUST00000221469 698 ntBASIC11.44□□□□□ -0.58
Col12a1Q60847 Myoz2-201ENSMUST00000029761 1181 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Col12a1Q60847 Prickle3-201ENSMUST00000033485 2301 ntAPPRIS P2 TSL 1 (best) BASIC11.44□□□□□ -0.58
Col12a1Q60847 Zer1-202ENSMUST00000113677 4189 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Col12a1Q60847 Atp6ap1-202ENSMUST00000114171 2157 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
Col12a1Q60847 Map7-202ENSMUST00000116259 3831 ntAPPRIS P2 TSL 1 (best) BASIC11.44□□□□□ -0.58
Col12a1Q60847 Gm28047-201ENSMUST00000184772 1611 ntAPPRIS P1 TSL 2 BASIC11.44□□□□□ -0.58
Col12a1Q60847 Itpa-ps1-201ENSMUST00000117207 597 ntBASIC11.44□□□□□ -0.58
Col12a1Q60847 Gm15373-201ENSMUST00000121495 214 ntBASIC11.44□□□□□ -0.58
Col12a1Q60847 Gm13799-201ENSMUST00000138883 838 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
Col12a1Q60847 AC134869.4-202ENSMUST00000224350 837 ntBASIC11.44□□□□□ -0.58
Col12a1Q60847 AC158986.2-201ENSMUST00000227487 618 ntBASIC11.44□□□□□ -0.58
Col12a1Q60847 AC102523.1-201ENSMUST00000228706 1144 ntBASIC11.44□□□□□ -0.58
Col12a1Q60847 Fnbp1-208ENSMUST00000113560 4726 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Col12a1Q60847 Tmppe-201ENSMUST00000111820 2921 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Col12a1Q60847 Igtp-203ENSMUST00000168280 1832 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
Col12a1Q60847 Tgfa-201ENSMUST00000032066 4527 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Col12a1Q60847 Rab27b-201ENSMUST00000069749 2671 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Col12a1Q60847 Otx2-209ENSMUST00000226501 2592 ntAPPRIS P1 BASIC11.44□□□□□ -0.58
Col12a1Q60847 Ppm1b-203ENSMUST00000112305 1591 ntAPPRIS ALT2 TSL 1 (best) BASIC11.44□□□□□ -0.58
Col12a1Q60847 Pde1c-209ENSMUST00000203372 3147 ntAPPRIS ALT2 TSL 5 BASIC11.44□□□□□ -0.58
Col12a1Q60847 Rbfox2-202ENSMUST00000111581 3072 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
Col12a1Q60847 Gm2044-201ENSMUST00000130771 911 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
Col12a1Q60847 Gm5529-201ENSMUST00000165691 891 ntBASIC11.44□□□□□ -0.58
Col12a1Q60847 Olfr1432-201ENSMUST00000180978 930 ntAPPRIS ALT2 BASIC11.44□□□□□ -0.58
Col12a1Q60847 Gm4903-201ENSMUST00000210462 405 ntBASIC11.44□□□□□ -0.58
Col12a1Q60847 Slc35a4-202ENSMUST00000050476 2362 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Col12a1Q60847 Drd1-201ENSMUST00000021932 3526 ntAPPRIS P2 TSL 1 (best) BASIC11.44□□□□□ -0.58
Col12a1Q60847 Zfp248-205ENSMUST00000161519 2243 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
Col12a1Q60847 Usp48-201ENSMUST00000055131 5722 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Col12a1Q60847 Cep104-201ENSMUST00000047497 5151 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Col12a1Q60847 Pan3-209ENSMUST00000176600 5541 ntAPPRIS ALT2 TSL 5 BASIC11.43□□□□□ -0.58
Col12a1Q60847 AC159314.1-201ENSMUST00000216917 3485 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Col12a1Q60847 Atf3-203ENSMUST00000195117 1906 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Col12a1Q60847 Srr-203ENSMUST00000108448 3239 ntAPPRIS P1 TSL 5 BASIC11.43□□□□□ -0.58
Col12a1Q60847 Gm5308-201ENSMUST00000196752 1354 ntBASIC11.43□□□□□ -0.58
Col12a1Q60847 Evi5l-202ENSMUST00000176072 3932 ntAPPRIS ALT2 TSL 5 BASIC11.43□□□□□ -0.58
Col12a1Q60847 Tnnt3-211ENSMUST00000105949 955 ntAPPRIS ALT2 TSL 5 BASIC11.43□□□□□ -0.58
Col12a1Q60847 Gm23694-201ENSMUST00000179335 110 ntBASIC11.43□□□□□ -0.58
Col12a1Q60847 Gm7183-201ENSMUST00000213870 1005 ntBASIC11.43□□□□□ -0.58
Col12a1Q60847 Mink1-202ENSMUST00000072873 4610 ntAPPRIS ALT2 TSL 5 BASIC11.43□□□□□ -0.58
Col12a1Q60847 Inppl1-201ENSMUST00000035836 4995 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Col12a1Q60847 Wnt16-202ENSMUST00000128245 3285 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Retrieved 100 of 76,532 protein–RNA pairs in 74.9 ms