Protein–RNA interactions for Protein: Q5R1C3

Trav3-3, T cell receptor alpha variable 3-3 (Fragment), mousemouse

Predictions only

Length 114 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav3-3Q5R1C3 Unc45a-202ENSMUST00000107368 3635 ntAPPRIS P1 TSL 5 BASIC8.96□□□□□ -0.98
Trav3-3Q5R1C3 Fos-201ENSMUST00000021674 2108 ntAPPRIS P1 TSL 1 (best) BASIC8.96□□□□□ -0.98
Trav3-3Q5R1C3 Immt-203ENSMUST00000114151 2518 ntAPPRIS ALT2 TSL 1 (best) BASIC8.96□□□□□ -0.98
Trav3-3Q5R1C3 Lysmd4-202ENSMUST00000179106 3319 ntAPPRIS ALT2 TSL 2 BASIC8.96□□□□□ -0.98
Trav3-3Q5R1C3 Gm21038-201ENSMUST00000222205 1383 ntBASIC8.96□□□□□ -0.98
Trav3-3Q5R1C3 Cflar-202ENSMUST00000097722 1771 ntAPPRIS ALT2 TSL 5 BASIC8.96□□□□□ -0.98
Trav3-3Q5R1C3 Serpinf2-201ENSMUST00000043696 2192 ntAPPRIS P1 TSL 1 (best) BASIC8.96□□□□□ -0.98
Trav3-3Q5R1C3 Mrgpre-201ENSMUST00000054048 3761 ntAPPRIS P1 TSL 1 (best) BASIC8.96□□□□□ -0.98
Trav3-3Q5R1C3 Mybpc3-203ENSMUST00000169776 4163 ntAPPRIS P2 TSL 5 BASIC8.96□□□□□ -0.98
Trav3-3Q5R1C3 Mettl14-204ENSMUST00000174323 4202 ntTSL 1 (best) BASIC8.96□□□□□ -0.98
Trav3-3Q5R1C3 Dhx34-207ENSMUST00000163968 3801 ntAPPRIS P2 TSL 1 (best) BASIC8.96□□□□□ -0.98
Trav3-3Q5R1C3 Kansl1-201ENSMUST00000018556 5061 ntAPPRIS P2 TSL 1 (best) BASIC8.96□□□□□ -0.98
Trav3-3Q5R1C3 Ccnc-203ENSMUST00000108240 1406 ntTSL 1 (best) BASIC8.96□□□□□ -0.98
Trav3-3Q5R1C3 Vill-203ENSMUST00000126251 1411 ntTSL 1 (best) BASIC8.96□□□□□ -0.98
Trav3-3Q5R1C3 Gm7537-201ENSMUST00000221660 1414 ntBASIC8.96□□□□□ -0.98
Trav3-3Q5R1C3 Mgat5-201ENSMUST00000038361 8436 ntAPPRIS P1 TSL 1 (best) BASIC8.96□□□□□ -0.98
Trav3-3Q5R1C3 Nfe2l1-212ENSMUST00000169828 3530 ntTSL 2 BASIC8.96□□□□□ -0.98
Trav3-3Q5R1C3 Rpe65-202ENSMUST00000196999 1863 ntAPPRIS P1 TSL 1 (best) BASIC8.96□□□□□ -0.98
Trav3-3Q5R1C3 Cep76-201ENSMUST00000097542 3979 ntAPPRIS P1 TSL 1 (best) BASIC8.96□□□□□ -0.98
Trav3-3Q5R1C3 Chp2-201ENSMUST00000033152 1456 ntAPPRIS P1 TSL 1 (best) BASIC8.96□□□□□ -0.98
Trav3-3Q5R1C3 Commd1-201ENSMUST00000057843 1459 ntTSL 1 (best) BASIC8.96□□□□□ -0.98
Trav3-3Q5R1C3 Zfp775-201ENSMUST00000061720 4083 ntAPPRIS P1 TSL 1 (best) BASIC8.95□□□□□ -0.98
Trav3-3Q5R1C3 Mybpc3-202ENSMUST00000137942 4134 ntAPPRIS ALT2 TSL 5 BASIC8.95□□□□□ -0.98
Trav3-3Q5R1C3 Slit2-202ENSMUST00000170109 7758 ntAPPRIS ALT2 TSL 5 BASIC8.95□□□□□ -0.98
Trav3-3Q5R1C3 Slit2-217ENSMUST00000174421 7785 ntTSL 1 (best) BASIC8.95□□□□□ -0.98
Trav3-3Q5R1C3 Gtf2h4-207ENSMUST00000160734 1569 ntAPPRIS P1 TSL 5 BASIC8.95□□□□□ -0.98
Trav3-3Q5R1C3 Gm8994-202ENSMUST00000204530 1573 ntAPPRIS P1 TSL 1 (best) BASIC8.95□□□□□ -0.98
Trav3-3Q5R1C3 Trak2-201ENSMUST00000027186 6189 ntAPPRIS P2 TSL 1 (best) BASIC8.95□□□□□ -0.98
Trav3-3Q5R1C3 Nop2-201ENSMUST00000044200 2597 ntAPPRIS P1 TSL 1 (best) BASIC8.95□□□□□ -0.98
Trav3-3Q5R1C3 Nrp1-201ENSMUST00000026917 3597 ntAPPRIS P1 TSL 1 (best) BASIC8.95□□□□□ -0.98
Trav3-3Q5R1C3 Tacr1-201ENSMUST00000032122 5021 ntAPPRIS P1 TSL 1 (best) BASIC8.95□□□□□ -0.98
Trav3-3Q5R1C3 Ypel4-201ENSMUST00000090729 1676 ntAPPRIS P1 TSL 1 (best) BASIC8.95□□□□□ -0.98
Trav3-3Q5R1C3 Ecsit-201ENSMUST00000098937 1673 ntAPPRIS P1 TSL 1 (best) BASIC8.95□□□□□ -0.98
Trav3-3Q5R1C3 Fam126a-203ENSMUST00000115109 2195 ntTSL 5 BASIC8.95□□□□□ -0.98
Trav3-3Q5R1C3 Mcf2l-222ENSMUST00000173099 6081 ntTSL 5 BASIC8.95□□□□□ -0.98
Trav3-3Q5R1C3 Rsc1a1-201ENSMUST00000105782 1749 ntAPPRIS P1 BASIC8.95□□□□□ -0.98
Trav3-3Q5R1C3 Foxred1-201ENSMUST00000043805 2232 ntAPPRIS P3 TSL 1 (best) BASIC8.95□□□□□ -0.98
Trav3-3Q5R1C3 Fam71e2-202ENSMUST00000174409 2716 ntAPPRIS P1 TSL 5 BASIC8.95□□□□□ -0.98
Trav3-3Q5R1C3 Btg2-201ENSMUST00000020692 2743 ntAPPRIS P1 TSL 1 (best) BASIC8.95□□□□□ -0.98
Trav3-3Q5R1C3 Ntrk3-206ENSMUST00000195262 2774 ntAPPRIS ALT2 TSL 5 BASIC8.95□□□□□ -0.98
Trav3-3Q5R1C3 Gm13306-202ENSMUST00000108018 542 ntAPPRIS ALT2 TSL 1 (best) BASIC8.95□□□□□ -0.98
Trav3-3Q5R1C3 Dancr-202ENSMUST00000120364 575 ntTSL 1 (best) BASIC8.95□□□□□ -0.98
Trav3-3Q5R1C3 Gm12416-201ENSMUST00000120911 1008 ntBASIC8.95□□□□□ -0.98
Trav3-3Q5R1C3 Gm12907-201ENSMUST00000148027 507 ntTSL 2 BASIC8.95□□□□□ -0.98
Trav3-3Q5R1C3 Tmem33-206ENSMUST00000162543 664 ntTSL 1 (best) BASIC8.95□□□□□ -0.98
Trav3-3Q5R1C3 Tma7-201ENSMUST00000167504 944 ntAPPRIS P1 TSL 1 (best) BASIC8.95□□□□□ -0.98
Trav3-3Q5R1C3 Gm17399-201ENSMUST00000181824 1181 ntTSL 1 (best) BASIC8.95□□□□□ -0.98
Trav3-3Q5R1C3 Mir6956-201ENSMUST00000183598 62 ntBASIC8.95□□□□□ -0.98
Trav3-3Q5R1C3 1700030C10Rik-202ENSMUST00000186243 126 ntBASIC8.95□□□□□ -0.98
Trav3-3Q5R1C3 Gm10576-201ENSMUST00000191927 825 ntBASIC8.95□□□□□ -0.98
Trav3-3Q5R1C3 Ccdc159-204ENSMUST00000216710 1126 ntAPPRIS ALT2 TSL 5 BASIC8.95□□□□□ -0.98
Trav3-3Q5R1C3 Gm10747-201ENSMUST00000217799 1014 ntTSL 1 (best) BASIC8.95□□□□□ -0.98
Trav3-3Q5R1C3 Cited1-201ENSMUST00000050551 901 ntAPPRIS P1 TSL 1 (best) BASIC8.95□□□□□ -0.98
Trav3-3Q5R1C3 Alkbh7-202ENSMUST00000074141 736 ntTSL 1 (best) BASIC8.95□□□□□ -0.98
Trav3-3Q5R1C3 Lhfpl5-201ENSMUST00000080780 1248 ntAPPRIS P1 TSL 1 (best) BASIC8.95□□□□□ -0.98
Trav3-3Q5R1C3 Rn7sk-201ENSMUST00000083103 331 ntBASIC8.95□□□□□ -0.98
Trav3-3Q5R1C3 Gm26315-201ENSMUST00000083890 321 ntBASIC8.95□□□□□ -0.98
Trav3-3Q5R1C3 Odf3l2-201ENSMUST00000095464 1248 ntAPPRIS P1 TSL 1 (best) BASIC8.95□□□□□ -0.98
Trav3-3Q5R1C3 Epb41-202ENSMUST00000054917 4948 ntAPPRIS ALT2 TSL 5 BASIC8.95□□□□□ -0.98
Trav3-3Q5R1C3 2410004P03Rik-201ENSMUST00000095823 3437 ntAPPRIS P1 TSL 1 (best) BASIC8.95□□□□□ -0.98
Trav3-3Q5R1C3 Nt5c3b-203ENSMUST00000107397 1348 ntTSL 1 (best) BASIC8.95□□□□□ -0.98
Trav3-3Q5R1C3 Ctnnd1-223ENSMUST00000111697 5294 ntTSL 5 BASIC8.95□□□□□ -0.98
Trav3-3Q5R1C3 AC160340.2-201ENSMUST00000220812 3675 ntBASIC8.95□□□□□ -0.98
Trav3-3Q5R1C3 Prpf40b-202ENSMUST00000118287 3129 ntAPPRIS ALT2 TSL 1 (best) BASIC8.95□□□□□ -0.98
Trav3-3Q5R1C3 Gm9816-201ENSMUST00000122292 1414 ntBASIC8.95□□□□□ -0.98
Trav3-3Q5R1C3 March1-207ENSMUST00000110258 2581 ntAPPRIS ALT1 TSL 5 BASIC8.95□□□□□ -0.98
Trav3-3Q5R1C3 Prkcsh-201ENSMUST00000003493 2012 ntAPPRIS P3 TSL 1 (best) BASIC8.95□□□□□ -0.98
Trav3-3Q5R1C3 Tspan32-205ENSMUST00000105924 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC8.95□□□□□ -0.98
Trav3-3Q5R1C3 Eps8l1-204ENSMUST00000163893 3868 ntAPPRIS P2 TSL 1 (best) BASIC8.95□□□□□ -0.98
Trav3-3Q5R1C3 4933413J09Rik-202ENSMUST00000059648 3387 ntTSL 1 (best) BASIC8.95□□□□□ -0.98
Trav3-3Q5R1C3 Slc35a4-206ENSMUST00000186538 2842 ntAPPRIS P1 TSL 1 (best) BASIC8.95□□□□□ -0.98
Trav3-3Q5R1C3 Adgrg5-201ENSMUST00000074570 2802 ntAPPRIS P3 TSL 1 (best) BASIC8.95□□□□□ -0.98
Trav3-3Q5R1C3 AC164092.1-201ENSMUST00000215635 2232 ntTSL 1 (best) BASIC8.95□□□□□ -0.98
Trav3-3Q5R1C3 Cit-212ENSMUST00000141101 6794 ntTSL 5 BASIC8.94□□□□□ -0.98
Trav3-3Q5R1C3 Camk2b-206ENSMUST00000101585 1650 ntTSL 5 BASIC8.94□□□□□ -0.98
Trav3-3Q5R1C3 Cxadr-202ENSMUST00000114229 1668 ntAPPRIS ALT2 TSL 1 (best) BASIC8.94□□□□□ -0.98
Trav3-3Q5R1C3 Tapbpl-201ENSMUST00000043422 2352 ntAPPRIS P1 TSL 1 (best) BASIC8.94□□□□□ -0.98
Trav3-3Q5R1C3 Gjb5-201ENSMUST00000046498 1721 ntAPPRIS P1 TSL 1 (best) BASIC8.94□□□□□ -0.98
Trav3-3Q5R1C3 Capza1-201ENSMUST00000094028 3193 ntAPPRIS P1 TSL 1 (best) BASIC8.94□□□□□ -0.98
Trav3-3Q5R1C3 Arfgap3-202ENSMUST00000226124 2461 ntAPPRIS ALT2 BASIC8.94□□□□□ -0.98
Trav3-3Q5R1C3 Rnf40-201ENSMUST00000033088 3906 ntTSL 5 BASIC8.94□□□□□ -0.98
Trav3-3Q5R1C3 4632411P08Rik-201ENSMUST00000181005 3237 ntTSL 1 (best) BASIC8.94□□□□□ -0.98
Trav3-3Q5R1C3 Diablo-207ENSMUST00000145152 2588 ntTSL 1 (best) BASIC8.94□□□□□ -0.98
Trav3-3Q5R1C3 Zfp704-201ENSMUST00000041124 13834 ntAPPRIS P1 TSL 1 (best) BASIC8.94□□□□□ -0.98
Trav3-3Q5R1C3 Zfp957-201ENSMUST00000040802 2613 ntAPPRIS P1 TSL 1 (best) BASIC8.94□□□□□ -0.98
Trav3-3Q5R1C3 Plekha5-212ENSMUST00000204876 1928 ntTSL 5 BASIC8.94□□□□□ -0.98
Trav3-3Q5R1C3 Eif4g2-206ENSMUST00000161051 3548 ntTSL 1 (best) BASIC8.94□□□□□ -0.98
Trav3-3Q5R1C3 Emp1-202ENSMUST00000111907 2763 ntAPPRIS P1 TSL 1 (best) BASIC8.94□□□□□ -0.98
Trav3-3Q5R1C3 Golga2-203ENSMUST00000113377 4361 ntAPPRIS ALT2 TSL 5 BASIC8.94□□□□□ -0.98
Trav3-3Q5R1C3 B230359F08Rik-201ENSMUST00000103671 426 ntAPPRIS P1 BASIC8.94□□□□□ -0.98
Trav3-3Q5R1C3 Fgf18-202ENSMUST00000109363 991 ntTSL 3 BASIC8.94□□□□□ -0.98
Trav3-3Q5R1C3 Gm11400-201ENSMUST00000120853 1214 ntBASIC8.94□□□□□ -0.98
Trav3-3Q5R1C3 Gm14719-201ENSMUST00000121891 340 ntBASIC8.94□□□□□ -0.98
Trav3-3Q5R1C3 Tctn3-202ENSMUST00000132452 1271 ntAPPRIS ALT2 TSL 1 (best) BASIC8.94□□□□□ -0.98
Trav3-3Q5R1C3 Gm13850-201ENSMUST00000140465 623 ntTSL 3 BASIC8.94□□□□□ -0.98
Trav3-3Q5R1C3 Ntpcr-205ENSMUST00000143504 520 ntTSL 5 BASIC8.94□□□□□ -0.98
Trav3-3Q5R1C3 Lgals3-203ENSMUST00000146468 1072 ntAPPRIS P1 TSL 1 (best) BASIC8.94□□□□□ -0.98
Trav3-3Q5R1C3 Gm29542-201ENSMUST00000186876 704 ntTSL 3 BASIC8.94□□□□□ -0.98
Trav3-3Q5R1C3 AI467606-202ENSMUST00000206102 832 ntAPPRIS P1 TSL 5 BASIC8.94□□□□□ -0.98
Trav3-3Q5R1C3 Jakmip1-215ENSMUST00000212047 1191 ntTSL 5 BASIC8.94□□□□□ -0.98
Retrieved 100 of 76,532 protein–RNA pairs in 42.7 ms