Protein–RNA interactions for Protein: Q5DTM8

Rnf20, E3 ubiquitin-protein ligase BRE1A, mousemouse

Predictions only

Length 973 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf20Q5DTM8 Gm37348-201ENSMUST00000193104 1789 ntBASIC14.21□□□□□ -0.13
Rnf20Q5DTM8 Gm2670-201ENSMUST00000180668 2804 ntTSL 1 (best) BASIC14.21□□□□□ -0.14
Rnf20Q5DTM8 Tmem8b-201ENSMUST00000107864 4726 ntAPPRIS P1 TSL 5 BASIC14.21□□□□□ -0.14
Rnf20Q5DTM8 Adgrv1-206ENSMUST00000128120 1591 ntTSL 1 (best) BASIC14.21□□□□□ -0.14
Rnf20Q5DTM8 Atxn2l-203ENSMUST00000167759 4023 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.14
Rnf20Q5DTM8 Dock6-201ENSMUST00000034728 6467 ntAPPRIS ALT2 TSL 5 BASIC14.21□□□□□ -0.14
Rnf20Q5DTM8 Slc29a1-213ENSMUST00000167692 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.14
Rnf20Q5DTM8 Hk1-205ENSMUST00000130422 2916 ntAPPRIS ALT2 TSL 5 BASIC14.21□□□□□ -0.14
Rnf20Q5DTM8 St6galnac5-201ENSMUST00000044278 5667 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
Rnf20Q5DTM8 AC091458.1-201ENSMUST00000220902 1361 ntBASIC14.21□□□□□ -0.14
Rnf20Q5DTM8 Mpv17l-201ENSMUST00000023360 3087 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
Rnf20Q5DTM8 Nlrx1-202ENSMUST00000168499 3579 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
Rnf20Q5DTM8 Slc20a1-202ENSMUST00000110315 3219 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Rnf20Q5DTM8 Ikzf1-201ENSMUST00000018798 1542 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Rnf20Q5DTM8 Gm35040-201ENSMUST00000206829 5094 ntTSL 2 BASIC14.2□□□□□ -0.14
Rnf20Q5DTM8 Rgs7bp-201ENSMUST00000063551 7077 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Rnf20Q5DTM8 Lck-201ENSMUST00000067240 2185 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Rnf20Q5DTM8 Hnrnpr-201ENSMUST00000084219 2647 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Rnf20Q5DTM8 Kctd18-210ENSMUST00000164963 2114 ntTSL 5 BASIC14.2□□□□□ -0.14
Rnf20Q5DTM8 4931415C17Rik-202ENSMUST00000131064 2255 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Rnf20Q5DTM8 Prc1-206ENSMUST00000173824 2912 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Rnf20Q5DTM8 Gcc1-202ENSMUST00000090511 4650 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Rnf20Q5DTM8 Bpi-201ENSMUST00000065039 1926 ntAPPRIS P2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Rnf20Q5DTM8 Pamr1-201ENSMUST00000028612 2864 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Rnf20Q5DTM8 Gm22323-201ENSMUST00000103832 109 ntBASIC14.2□□□□□ -0.14
Rnf20Q5DTM8 Gm13665-201ENSMUST00000120830 528 ntBASIC14.2□□□□□ -0.14
Rnf20Q5DTM8 Atp10d-206ENSMUST00000169617 761 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Rnf20Q5DTM8 Cdk3-ps-202ENSMUST00000174177 915 ntAPPRIS P1 TSL 5 BASIC14.2□□□□□ -0.14
Rnf20Q5DTM8 Gm20442-201ENSMUST00000174630 492 ntTSL 3 BASIC14.2□□□□□ -0.14
Rnf20Q5DTM8 Gm6114-201ENSMUST00000182472 968 ntBASIC14.2□□□□□ -0.14
Rnf20Q5DTM8 Gm11523-203ENSMUST00000184482 802 ntTSL 3 BASIC14.2□□□□□ -0.14
Rnf20Q5DTM8 Nkg7-203ENSMUST00000206741 686 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Rnf20Q5DTM8 Gm44992-206ENSMUST00000209313 1261 ntTSL 5 BASIC14.2□□□□□ -0.14
Rnf20Q5DTM8 Emp3-203ENSMUST00000210297 601 ntAPPRIS P1 TSL 3 BASIC14.2□□□□□ -0.14
Rnf20Q5DTM8 AC025913.2-202ENSMUST00000219248 605 ntTSL 5 BASIC14.2□□□□□ -0.14
Rnf20Q5DTM8 Thoc7-209ENSMUST00000225325 765 ntBASIC14.2□□□□□ -0.14
Rnf20Q5DTM8 Serpine1-201ENSMUST00000041388 3011 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Rnf20Q5DTM8 Taf1b-201ENSMUST00000075954 2209 ntAPPRIS P2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Rnf20Q5DTM8 Ntrk2-202ENSMUST00000109838 6846 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Rnf20Q5DTM8 AC171277.1-201ENSMUST00000216902 1441 ntBASIC14.2□□□□□ -0.14
Rnf20Q5DTM8 AC123619.2-202ENSMUST00000225097 1568 ntBASIC14.2□□□□□ -0.14
Rnf20Q5DTM8 Pml-211ENSMUST00000153820 2652 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Rnf20Q5DTM8 Sec16a-202ENSMUST00000114082 8797 ntAPPRIS ALT2 TSL 5 BASIC14.2□□□□□ -0.14
Rnf20Q5DTM8 Rtp4-202ENSMUST00000209422 1859 ntAPPRIS P1 TSL 5 BASIC14.2□□□□□ -0.14
Rnf20Q5DTM8 Tgm2-201ENSMUST00000103122 3596 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Rnf20Q5DTM8 Gdpd5-208ENSMUST00000213887 2711 ntTSL 5 BASIC14.2□□□□□ -0.14
Rnf20Q5DTM8 Cdc14a-201ENSMUST00000090464 4485 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Rnf20Q5DTM8 Nxph1-202ENSMUST00000160300 2815 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Rnf20Q5DTM8 Oraov1-204ENSMUST00000128057 2231 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Rnf20Q5DTM8 Ibsp-201ENSMUST00000031246 2068 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Rnf20Q5DTM8 Ckmt1-201ENSMUST00000000317 1620 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Rnf20Q5DTM8 Gm43908-201ENSMUST00000205074 1472 ntBASIC14.19□□□□□ -0.14
Rnf20Q5DTM8 AC127242.1-201ENSMUST00000222861 1464 ntTSL 3 BASIC14.19□□□□□ -0.14
Rnf20Q5DTM8 Tsta3-201ENSMUST00000023231 1311 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Rnf20Q5DTM8 Cast-211ENSMUST00000223206 5141 ntAPPRIS ALT2 TSL 5 BASIC14.19□□□□□ -0.14
Rnf20Q5DTM8 Rad54l-202ENSMUST00000102705 2780 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Rnf20Q5DTM8 Itpr3-201ENSMUST00000049308 8990 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Rnf20Q5DTM8 Rad51ap1-202ENSMUST00000112221 1871 ntAPPRIS P3 TSL 1 (best) BASIC14.19□□□□□ -0.14
Rnf20Q5DTM8 Accs-202ENSMUST00000068513 1872 ntAPPRIS P3 TSL 5 BASIC14.19□□□□□ -0.14
Rnf20Q5DTM8 Mog-201ENSMUST00000102665 1704 ntAPPRIS P2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Rnf20Q5DTM8 Fam71f1-201ENSMUST00000090487 1584 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Rnf20Q5DTM8 Btnl2-202ENSMUST00000178562 2563 ntAPPRIS ALT2 TSL 5 BASIC14.19□□□□□ -0.14
Rnf20Q5DTM8 Btnl2-201ENSMUST00000025198 2564 ntAPPRIS P2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Rnf20Q5DTM8 Abca7-201ENSMUST00000043866 6590 ntAPPRIS P3 TSL 1 (best) BASIC14.19□□□□□ -0.14
Rnf20Q5DTM8 Bub1-201ENSMUST00000028858 3421 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Rnf20Q5DTM8 Ldb3-204ENSMUST00000064098 2299 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Rnf20Q5DTM8 Ypel3-202ENSMUST00000106356 785 ntAPPRIS P1 TSL 5 BASIC14.19□□□□□ -0.14
Rnf20Q5DTM8 Mroh5-202ENSMUST00000110021 2145 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Rnf20Q5DTM8 Prox1os-201ENSMUST00000110279 828 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Rnf20Q5DTM8 Mogat1-202ENSMUST00000113524 1228 ntAPPRIS P1 TSL 5 BASIC14.19□□□□□ -0.14
Rnf20Q5DTM8 Rap1a-ps2-201ENSMUST00000118467 559 ntBASIC14.19□□□□□ -0.14
Rnf20Q5DTM8 Eef1akmt2-202ENSMUST00000120425 573 ntTSL 3 BASIC14.19□□□□□ -0.14
Rnf20Q5DTM8 Pdlim2-205ENSMUST00000129174 729 ntTSL 2 BASIC14.19□□□□□ -0.14
Rnf20Q5DTM8 Rps28-202ENSMUST00000166693 271 ntAPPRIS P1 TSL 5 BASIC14.19□□□□□ -0.14
Rnf20Q5DTM8 Gm17334-201ENSMUST00000170390 907 ntAPPRIS P1 BASIC14.19□□□□□ -0.14
Rnf20Q5DTM8 Gm5441-202ENSMUST00000190132 449 ntTSL 2 BASIC14.19□□□□□ -0.14
Rnf20Q5DTM8 Gm19287-201ENSMUST00000203190 358 ntBASIC14.19□□□□□ -0.14
Rnf20Q5DTM8 Gm43930-201ENSMUST00000203868 845 ntBASIC14.19□□□□□ -0.14
Rnf20Q5DTM8 Gm32390-201ENSMUST00000212713 1172 ntBASIC14.19□□□□□ -0.14
Rnf20Q5DTM8 Odf4-201ENSMUST00000038932 1078 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Rnf20Q5DTM8 Olfr981-201ENSMUST00000059859 997 ntAPPRIS P1 BASIC14.19□□□□□ -0.14
Rnf20Q5DTM8 Ccdc28a-202ENSMUST00000080860 1190 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Rnf20Q5DTM8 Clec4b2-201ENSMUST00000088455 1174 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Rnf20Q5DTM8 Wdr26-208ENSMUST00000162963 6452 ntAPPRIS ALT2 TSL 5 BASIC14.19□□□□□ -0.14
Rnf20Q5DTM8 Scmh1-201ENSMUST00000000087 3353 ntAPPRIS P3 TSL 1 (best) BASIC14.19□□□□□ -0.14
Rnf20Q5DTM8 Xpnpep1-209ENSMUST00000183108 4078 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Rnf20Q5DTM8 Btbd9-201ENSMUST00000079924 6657 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Rnf20Q5DTM8 Cdrt4os1-201ENSMUST00000130177 2090 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Rnf20Q5DTM8 Bmp2-201ENSMUST00000028836 3555 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Rnf20Q5DTM8 Cplx3-201ENSMUST00000045068 2859 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Rnf20Q5DTM8 Tiprl-201ENSMUST00000043235 4380 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Rnf20Q5DTM8 Cyb5rl-202ENSMUST00000106756 1604 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Rnf20Q5DTM8 Ptprt-203ENSMUST00000109443 12112 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Rnf20Q5DTM8 Itgb4-204ENSMUST00000106460 5919 ntAPPRIS ALT2 TSL 5 BASIC14.19□□□□□ -0.14
Rnf20Q5DTM8 H2-T10-201ENSMUST00000166442 1481 ntAPPRIS P1 TSL 5 BASIC14.18□□□□□ -0.14
Rnf20Q5DTM8 Lsg1-201ENSMUST00000117363 3180 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Rnf20Q5DTM8 Kcnj11-205ENSMUST00000211674 3142 ntAPPRIS P1 BASIC14.18□□□□□ -0.14
Rnf20Q5DTM8 Ngef-202ENSMUST00000068681 3109 ntAPPRIS P4 TSL 1 (best) BASIC14.18□□□□□ -0.14
Rnf20Q5DTM8 Cisd2-201ENSMUST00000029815 3361 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Rnf20Q5DTM8 Gm5422-201ENSMUST00000050717 2721 ntBASIC14.18□□□□□ -0.14
Retrieved 100 of 76,532 protein–RNA pairs in 81.8 ms