Protein–RNA interactions for Protein: Q3UP24

Nlrc4, NLR family CARD domain-containing protein 4, mousemouse

Predictions only

Length 1,024 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nlrc4Q3UP24 Gm29539-201ENSMUST00000188031 758 ntTSL 3 BASIC12.58□□□□□ -0.4
Nlrc4Q3UP24 Gm28778-201ENSMUST00000190734 785 ntAPPRIS P1 TSL 3 BASIC12.58□□□□□ -0.4
Nlrc4Q3UP24 AU022133-201ENSMUST00000200601 873 ntBASIC12.58□□□□□ -0.4
Nlrc4Q3UP24 Tcf4-252ENSMUST00000202477 1873 ntTSL 5 BASIC12.58□□□□□ -0.4
Nlrc4Q3UP24 Gm19287-201ENSMUST00000203190 358 ntBASIC12.58□□□□□ -0.4
Nlrc4Q3UP24 1700011B04Rik-212ENSMUST00000223526 889 ntTSL 5 BASIC12.58□□□□□ -0.4
Nlrc4Q3UP24 Sv2a-201ENSMUST00000035371 4334 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Nlrc4Q3UP24 Wdr81-204ENSMUST00000173320 6908 ntAPPRIS P1 TSL 5 BASIC12.58□□□□□ -0.4
Nlrc4Q3UP24 Chd7-201ENSMUST00000039267 9444 ntAPPRIS P1 TSL 5 BASIC12.58□□□□□ -0.4
Nlrc4Q3UP24 Ptger4-202ENSMUST00000120563 3312 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.4
Nlrc4Q3UP24 Rgs6-211ENSMUST00000191107 1621 ntTSL 5 BASIC12.58□□□□□ -0.4
Nlrc4Q3UP24 Gdap2-201ENSMUST00000029459 3008 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Nlrc4Q3UP24 Adh4-201ENSMUST00000013458 1314 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Nlrc4Q3UP24 Olfr139-204ENSMUST00000214111 1311 ntAPPRIS P1 TSL 5 BASIC12.58□□□□□ -0.4
Nlrc4Q3UP24 Clpb-201ENSMUST00000001884 4627 ntAPPRIS P2 TSL 1 (best) BASIC12.58□□□□□ -0.4
Nlrc4Q3UP24 Pcdhac1-201ENSMUST00000007584 5419 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Nlrc4Q3UP24 Wnt3-201ENSMUST00000000127 3076 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Nlrc4Q3UP24 Prr18-202ENSMUST00000163887 3251 ntAPPRIS P1 TSL 3 BASIC12.57□□□□□ -0.4
Nlrc4Q3UP24 Gm16907-201ENSMUST00000180734 2317 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Nlrc4Q3UP24 Hsd3b6-202ENSMUST00000170847 1539 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Nlrc4Q3UP24 G6pdx-201ENSMUST00000004327 2652 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Nlrc4Q3UP24 Pif1-202ENSMUST00000131483 3309 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Nlrc4Q3UP24 Slc38a6-206ENSMUST00000140523 3032 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Nlrc4Q3UP24 Sorcs1-201ENSMUST00000072685 4396 ntTSL 5 BASIC12.57□□□□□ -0.4
Nlrc4Q3UP24 Flrt1-201ENSMUST00000113383 5859 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Nlrc4Q3UP24 Lamc3-201ENSMUST00000028187 5871 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Nlrc4Q3UP24 Myocd-201ENSMUST00000101042 2585 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Nlrc4Q3UP24 Slc22a5-201ENSMUST00000019044 3062 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Nlrc4Q3UP24 Rpl11-201ENSMUST00000102536 833 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Nlrc4Q3UP24 Gm11660-201ENSMUST00000120955 412 ntBASIC12.57□□□□□ -0.4
Nlrc4Q3UP24 Gm15891-201ENSMUST00000127307 611 ntTSL 5 BASIC12.57□□□□□ -0.4
Nlrc4Q3UP24 Htr2c-207ENSMUST00000156697 4654 ntTSL 5 BASIC12.57□□□□□ -0.4
Nlrc4Q3UP24 Ubl5-206ENSMUST00000161486 794 ntTSL 2 BASIC12.57□□□□□ -0.4
Nlrc4Q3UP24 Gm37466-201ENSMUST00000195692 652 ntBASIC12.57□□□□□ -0.4
Nlrc4Q3UP24 Gm42980-201ENSMUST00000200582 1028 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Nlrc4Q3UP24 Gm9445-201ENSMUST00000207454 1285 ntBASIC12.57□□□□□ -0.4
Nlrc4Q3UP24 Nanos3-202ENSMUST00000210202 692 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Nlrc4Q3UP24 Gm39460-201ENSMUST00000215728 1266 ntTSL 5 BASIC12.57□□□□□ -0.4
Nlrc4Q3UP24 AC133602.1-201ENSMUST00000227510 509 ntBASIC12.57□□□□□ -0.4
Nlrc4Q3UP24 Nckap5l-201ENSMUST00000023747 4853 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Nlrc4Q3UP24 Acoxl-201ENSMUST00000028859 2842 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Nlrc4Q3UP24 Adprhl1-205ENSMUST00000204916 5228 ntTSL 5 BASIC12.57□□□□□ -0.4
Nlrc4Q3UP24 Eogt-201ENSMUST00000054344 4424 ntAPPRIS P2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Nlrc4Q3UP24 Agpat5-202ENSMUST00000149565 10779 ntAPPRIS P2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Nlrc4Q3UP24 Bdnf-205ENSMUST00000111045 3973 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Nlrc4Q3UP24 Sod2-201ENSMUST00000007012 3824 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Nlrc4Q3UP24 Arsg-202ENSMUST00000106696 1508 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Nlrc4Q3UP24 Tubgcp2-201ENSMUST00000026547 2960 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Nlrc4Q3UP24 Pde9a-201ENSMUST00000047168 2065 ntAPPRIS P2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Nlrc4Q3UP24 Mrps26-202ENSMUST00000145614 4278 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Nlrc4Q3UP24 Nicn1-201ENSMUST00000035227 2133 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Nlrc4Q3UP24 Snap29-201ENSMUST00000023449 3429 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Nlrc4Q3UP24 0610037L13Rik-207ENSMUST00000125107 1551 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Nlrc4Q3UP24 H2-M2-201ENSMUST00000016427 1550 ntAPPRIS P3 TSL 1 (best) BASIC12.56□□□□□ -0.4
Nlrc4Q3UP24 Stat5a-203ENSMUST00000107357 3605 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Nlrc4Q3UP24 Hnrnph2-205ENSMUST00000113203 2315 ntAPPRIS P1 TSL 5 BASIC12.56□□□□□ -0.4
Nlrc4Q3UP24 Tbx10-201ENSMUST00000041871 1777 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Nlrc4Q3UP24 Thrb-203ENSMUST00000091471 1758 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Nlrc4Q3UP24 Tln1-201ENSMUST00000030187 8393 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Nlrc4Q3UP24 Pcdha2-202ENSMUST00000195590 4645 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Nlrc4Q3UP24 Zdhhc20-205ENSMUST00000226057 2179 ntAPPRIS ALT2 BASIC12.56□□□□□ -0.4
Nlrc4Q3UP24 Pprc1-201ENSMUST00000062322 5205 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Nlrc4Q3UP24 Gemin4-201ENSMUST00000102500 3540 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Nlrc4Q3UP24 Ckmt1-201ENSMUST00000000317 1620 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Nlrc4Q3UP24 Col6a2-201ENSMUST00000001181 3949 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Nlrc4Q3UP24 5033428I22Rik-201ENSMUST00000181638 2040 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Nlrc4Q3UP24 D030025P21Rik-202ENSMUST00000220643 3987 ntBASIC12.56□□□□□ -0.4
Nlrc4Q3UP24 Mmab-201ENSMUST00000031560 3020 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Nlrc4Q3UP24 Ighv2-6-8-201ENSMUST00000103455 342 ntAPPRIS ALT2 BASIC12.56□□□□□ -0.4
Nlrc4Q3UP24 Prr15l-203ENSMUST00000107633 930 ntAPPRIS P1 TSL 2 BASIC12.56□□□□□ -0.4
Nlrc4Q3UP24 Gm12857-201ENSMUST00000117678 592 ntBASIC12.56□□□□□ -0.4
Nlrc4Q3UP24 Gm12196-201ENSMUST00000120954 262 ntBASIC12.56□□□□□ -0.4
Nlrc4Q3UP24 Gm13205-201ENSMUST00000123548 562 ntTSL 3 BASIC12.56□□□□□ -0.4
Nlrc4Q3UP24 Prdx5-203ENSMUST00000149261 755 ntAPPRIS ALT2 TSL 2 BASIC12.56□□□□□ -0.4
Nlrc4Q3UP24 Gm25881-201ENSMUST00000157783 103 ntBASIC12.56□□□□□ -0.4
Nlrc4Q3UP24 Gm15722-201ENSMUST00000159271 661 ntTSL 3 BASIC12.56□□□□□ -0.4
Nlrc4Q3UP24 H2-Q3-201ENSMUST00000172583 608 ntBASIC12.56□□□□□ -0.4
Nlrc4Q3UP24 Gm4310-201ENSMUST00000177847 889 ntBASIC12.56□□□□□ -0.4
Nlrc4Q3UP24 Gm38228-201ENSMUST00000193169 1293 ntBASIC12.56□□□□□ -0.4
Nlrc4Q3UP24 Gm33222-201ENSMUST00000193725 654 ntTSL 3 BASIC12.56□□□□□ -0.4
Nlrc4Q3UP24 Gm35960-201ENSMUST00000202712 767 ntBASIC12.56□□□□□ -0.4
Nlrc4Q3UP24 Rps4l-202ENSMUST00000204242 789 ntBASIC12.56□□□□□ -0.4
Nlrc4Q3UP24 Mir219a-1-201ENSMUST00000083621 110 ntBASIC12.56□□□□□ -0.4
Nlrc4Q3UP24 Lyz1-201ENSMUST00000092162 1263 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Nlrc4Q3UP24 2810407A14Rik-201ENSMUST00000069809 1699 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Nlrc4Q3UP24 4931415C17Rik-202ENSMUST00000131064 2255 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Nlrc4Q3UP24 Ildr1-203ENSMUST00000119464 2878 ntAPPRIS P3 TSL 1 (best) BASIC12.56□□□□□ -0.4
Nlrc4Q3UP24 Kif1a-202ENSMUST00000112958 5931 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Nlrc4Q3UP24 Zfp354c-202ENSMUST00000109135 5325 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Nlrc4Q3UP24 Hnrnpf-201ENSMUST00000035493 2147 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Nlrc4Q3UP24 Atp8a2-202ENSMUST00000131670 1725 ntTSL 2 BASIC12.56□□□□□ -0.4
Nlrc4Q3UP24 Cog3-203ENSMUST00000227473 4197 ntBASIC12.56□□□□□ -0.4
Nlrc4Q3UP24 Epm2aip1-201ENSMUST00000060711 7149 ntAPPRIS P1 BASIC12.56□□□□□ -0.4
Nlrc4Q3UP24 Rtl5-204ENSMUST00000188731 4325 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Nlrc4Q3UP24 Acly-203ENSMUST00000107389 4426 ntAPPRIS ALT1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Nlrc4Q3UP24 Wac-216ENSMUST00000171486 1608 ntTSL 5 BASIC12.55□□□□□ -0.4
Nlrc4Q3UP24 Abhd14b-207ENSMUST00000213179 1627 ntAPPRIS P1 TSL 2 BASIC12.55□□□□□ -0.4
Nlrc4Q3UP24 Syvn1-207ENSMUST00000156550 3363 ntAPPRIS ALT2 TSL 5 BASIC12.55□□□□□ -0.4
Nlrc4Q3UP24 Slc29a1-213ENSMUST00000167692 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Nlrc4Q3UP24 Ndrg2-201ENSMUST00000004673 2099 ntAPPRIS P3 TSL 1 (best) BASIC12.55□□□□□ -0.4
Retrieved 100 of 76,532 protein–RNA pairs in 58.8 ms