Protein–RNA interactions for Protein: Q3TCX3

Khdc4, KH homology domain-containing protein 4, mousemouse

Predictions only

Length 612 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Khdc4Q3TCX3 Gm13563-201ENSMUST00000125518 643 ntTSL 3 BASIC11.39□□□□□ -0.59
Khdc4Q3TCX3 Gm12589-201ENSMUST00000153767 638 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
Khdc4Q3TCX3 Gm16172-201ENSMUST00000156224 682 ntTSL 3 BASIC11.39□□□□□ -0.59
Khdc4Q3TCX3 Slc5a11-207ENSMUST00000167299 2022 ntAPPRIS P1 TSL 5 BASIC11.39□□□□□ -0.59
Khdc4Q3TCX3 Gm29087-201ENSMUST00000186462 645 ntTSL 5 BASIC11.39□□□□□ -0.59
Khdc4Q3TCX3 4930448A20Rik-201ENSMUST00000205988 1034 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
Khdc4Q3TCX3 Abhd6-201ENSMUST00000026313 1401 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Khdc4Q3TCX3 Treh-201ENSMUST00000034609 2048 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Khdc4Q3TCX3 Fuca2-201ENSMUST00000060212 2007 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Khdc4Q3TCX3 Npr2-202ENSMUST00000107874 3480 ntTSL 5 BASIC11.39□□□□□ -0.59
Khdc4Q3TCX3 Uap1l1-201ENSMUST00000102925 3349 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Khdc4Q3TCX3 Steap3-204ENSMUST00000112643 2873 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
Khdc4Q3TCX3 Lnx1-204ENSMUST00000117388 2564 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Khdc4Q3TCX3 Pcgf3-201ENSMUST00000046975 7708 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Khdc4Q3TCX3 Adamtsl3-204ENSMUST00000173828 2292 ntTSL 5 BASIC11.39□□□□□ -0.59
Khdc4Q3TCX3 Mrgprg-201ENSMUST00000058092 1821 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Khdc4Q3TCX3 Rnh1-202ENSMUST00000167493 1656 ntAPPRIS P3 TSL 1 (best) BASIC11.39□□□□□ -0.59
Khdc4Q3TCX3 Rnh1-204ENSMUST00000210314 1658 ntAPPRIS ALT2 TSL 1 (best) BASIC11.39□□□□□ -0.59
Khdc4Q3TCX3 A630076J17Rik-201ENSMUST00000179399 1358 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Khdc4Q3TCX3 Trpv6-203ENSMUST00000201471 2304 ntAPPRIS P2 TSL 1 (best) BASIC11.38□□□□□ -0.59
Khdc4Q3TCX3 Sh3gl3-206ENSMUST00000179318 1489 ntTSL 5 BASIC11.38□□□□□ -0.59
Khdc4Q3TCX3 Cd8b1-201ENSMUST00000065248 1483 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Khdc4Q3TCX3 Slc39a9-204ENSMUST00000217889 2155 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
Khdc4Q3TCX3 Ccr6-203ENSMUST00000166348 1310 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Khdc4Q3TCX3 Pappa-201ENSMUST00000084501 11027 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Khdc4Q3TCX3 Pex26-201ENSMUST00000088561 4093 ntAPPRIS P3 TSL 1 (best) BASIC11.38□□□□□ -0.59
Khdc4Q3TCX3 Med8-204ENSMUST00000106384 1743 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
Khdc4Q3TCX3 Hnrnpf-209ENSMUST00000180020 2280 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Khdc4Q3TCX3 Gm34785-201ENSMUST00000222571 4582 ntTSL 5 BASIC11.38□□□□□ -0.59
Khdc4Q3TCX3 Cyp27b1-201ENSMUST00000165764 2380 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Khdc4Q3TCX3 Spata48-201ENSMUST00000020410 1430 ntAPPRIS ALT2 TSL 5 BASIC11.38□□□□□ -0.59
Khdc4Q3TCX3 Rims3-202ENSMUST00000106283 6437 ntAPPRIS P1 TSL 5 BASIC11.38□□□□□ -0.59
Khdc4Q3TCX3 Dsc2-202ENSMUST00000075214 4508 ntAPPRIS ALT2 TSL 5 BASIC11.38□□□□□ -0.59
Khdc4Q3TCX3 BC067074-203ENSMUST00000136755 8274 ntAPPRIS P1 TSL 5 BASIC11.38□□□□□ -0.59
Khdc4Q3TCX3 Ighg2c-201ENSMUST00000103416 1214 ntAPPRIS P5 BASIC11.38□□□□□ -0.59
Khdc4Q3TCX3 Gm12298-201ENSMUST00000126999 731 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
Khdc4Q3TCX3 Gm3508-201ENSMUST00000186012 792 ntBASIC11.38□□□□□ -0.59
Khdc4Q3TCX3 Gm28982-201ENSMUST00000186895 512 ntTSL 3 BASIC11.38□□□□□ -0.59
Khdc4Q3TCX3 C230062I16Rik-204ENSMUST00000208342 643 ntTSL 3 BASIC11.38□□□□□ -0.59
Khdc4Q3TCX3 Mob2-203ENSMUST00000209732 977 ntAPPRIS ALT2 TSL 3 BASIC11.38□□□□□ -0.59
Khdc4Q3TCX3 Gm45765-201ENSMUST00000212027 1035 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
Khdc4Q3TCX3 Gm14267-206ENSMUST00000226870 1209 ntBASIC11.38□□□□□ -0.59
Khdc4Q3TCX3 Spaca4-201ENSMUST00000094424 707 ntAPPRIS P1 BASIC11.38□□□□□ -0.59
Khdc4Q3TCX3 Fzd6-201ENSMUST00000022906 4081 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Khdc4Q3TCX3 Pcdhga6-201ENSMUST00000195823 4733 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Khdc4Q3TCX3 Pank4-202ENSMUST00000070953 2706 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
Khdc4Q3TCX3 Mrap2-201ENSMUST00000049457 1931 ntAPPRIS P1 TSL 3 BASIC11.38□□□□□ -0.59
Khdc4Q3TCX3 C130026I21Rik-202ENSMUST00000093506 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC11.38□□□□□ -0.59
Khdc4Q3TCX3 Adck1-202ENSMUST00000166940 2199 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Khdc4Q3TCX3 Fnbp1-202ENSMUST00000075326 1761 ntTSL 5 BASIC11.38□□□□□ -0.59
Khdc4Q3TCX3 Gm45342-201ENSMUST00000210903 1363 ntBASIC11.38□□□□□ -0.59
Khdc4Q3TCX3 Gramd2-201ENSMUST00000098661 1368 ntAPPRIS P2 TSL 1 (best) BASIC11.38□□□□□ -0.59
Khdc4Q3TCX3 Ncapd2-201ENSMUST00000043848 4629 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Khdc4Q3TCX3 Abcg8-203ENSMUST00000171915 2284 ntAPPRIS ALT2 TSL 1 (best) BASIC11.38□□□□□ -0.59
Khdc4Q3TCX3 Mirt1-202ENSMUST00000180667 1633 ntTSL 5 BASIC11.38□□□□□ -0.59
Khdc4Q3TCX3 Dopey2-207ENSMUST00000227156 7340 ntBASIC11.38□□□□□ -0.59
Khdc4Q3TCX3 Gm10545-201ENSMUST00000097612 4969 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
Khdc4Q3TCX3 Lmnb2-201ENSMUST00000057623 3531 ntAPPRIS ALT2 TSL 1 (best) BASIC11.38□□□□□ -0.59
Khdc4Q3TCX3 0610040F04Rik-201ENSMUST00000137478 1734 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
Khdc4Q3TCX3 Rara-207ENSMUST00000164748 3129 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Khdc4Q3TCX3 Tead3-207ENSMUST00000219703 1320 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
Khdc4Q3TCX3 Zp3-201ENSMUST00000005073 1323 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Khdc4Q3TCX3 Styxl1-201ENSMUST00000053906 1582 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Khdc4Q3TCX3 Rpap1-203ENSMUST00000110793 5458 ntAPPRIS P1 TSL 5 BASIC11.37□□□□□ -0.59
Khdc4Q3TCX3 Usp5-202ENSMUST00000122110 3076 ntAPPRIS ALT1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Khdc4Q3TCX3 Rbm12b1-201ENSMUST00000050069 2949 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Khdc4Q3TCX3 Ptpn2-203ENSMUST00000122412 2667 ntAPPRIS ALT2 TSL 1 (best) BASIC11.37□□□□□ -0.59
Khdc4Q3TCX3 Tmem115-201ENSMUST00000010189 2194 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Khdc4Q3TCX3 Cacna1s-202ENSMUST00000112068 6018 ntAPPRIS ALT2 TSL 1 (best) BASIC11.37□□□□□ -0.59
Khdc4Q3TCX3 Usp3-211ENSMUST00000174387 1901 ntTSL 5 BASIC11.37□□□□□ -0.59
Khdc4Q3TCX3 Ambra1-203ENSMUST00000099712 5021 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Khdc4Q3TCX3 Mark4-201ENSMUST00000085715 3886 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Khdc4Q3TCX3 Epb41l2-204ENSMUST00000217929 3621 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
Khdc4Q3TCX3 Pcdhga4-201ENSMUST00000194418 4727 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Khdc4Q3TCX3 Hlcs-201ENSMUST00000099512 4833 ntAPPRIS P2 TSL 1 (best) BASIC11.37□□□□□ -0.59
Khdc4Q3TCX3 Trav13-1-201ENSMUST00000103651 331 ntAPPRIS P1 BASIC11.37□□□□□ -0.59
Khdc4Q3TCX3 Gm11989-201ENSMUST00000117240 672 ntBASIC11.37□□□□□ -0.59
Khdc4Q3TCX3 Gm11362-201ENSMUST00000118838 850 ntBASIC11.37□□□□□ -0.59
Khdc4Q3TCX3 Tbc1d22bos-201ENSMUST00000159875 826 ntTSL 3 BASIC11.37□□□□□ -0.59
Khdc4Q3TCX3 Gm9550-201ENSMUST00000161130 862 ntBASIC11.37□□□□□ -0.59
Khdc4Q3TCX3 Gm38304-201ENSMUST00000161826 600 ntTSL 3 BASIC11.37□□□□□ -0.59
Khdc4Q3TCX3 Gm9211-201ENSMUST00000182882 975 ntBASIC11.37□□□□□ -0.59
Khdc4Q3TCX3 Gm42599-201ENSMUST00000201308 469 ntBASIC11.37□□□□□ -0.59
Khdc4Q3TCX3 5330413P13Rik-205ENSMUST00000210961 913 ntTSL 5 BASIC11.37□□□□□ -0.59
Khdc4Q3TCX3 Gm21027-201ENSMUST00000219300 1236 ntBASIC11.37□□□□□ -0.59
Khdc4Q3TCX3 AC131330.1-201ENSMUST00000227814 1015 ntBASIC11.37□□□□□ -0.59
Khdc4Q3TCX3 Faah-201ENSMUST00000049095 3827 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Khdc4Q3TCX3 Nudt7-201ENSMUST00000066514 935 ntAPPRIS ALT2 TSL 1 (best) BASIC11.37□□□□□ -0.59
Khdc4Q3TCX3 Olfr1413-201ENSMUST00000074859 1082 ntAPPRIS P1 BASIC11.37□□□□□ -0.59
Khdc4Q3TCX3 Cd37-202ENSMUST00000098461 1227 ntAPPRIS P3 TSL 1 (best) BASIC11.37□□□□□ -0.59
Khdc4Q3TCX3 Kalrn-207ENSMUST00000114960 6452 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
Khdc4Q3TCX3 Anxa8-201ENSMUST00000022519 1880 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Khdc4Q3TCX3 Tmem237-202ENSMUST00000094917 1869 ntAPPRIS P4 TSL 1 (best) BASIC11.37□□□□□ -0.59
Khdc4Q3TCX3 Fosb-205ENSMUST00000208326 3654 ntTSL 5 BASIC11.37□□□□□ -0.59
Khdc4Q3TCX3 Kifap3-202ENSMUST00000077642 4012 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
Khdc4Q3TCX3 C530008M17Rik-203ENSMUST00000120818 1378 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
Khdc4Q3TCX3 Tfe3-204ENSMUST00000115677 2943 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
Khdc4Q3TCX3 Sp4-203ENSMUST00000222314 2677 ntAPPRIS P2 TSL 1 (best) BASIC11.37□□□□□ -0.59
Khdc4Q3TCX3 Ndc1-204ENSMUST00000139560 4584 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Khdc4Q3TCX3 Rps6ka6-210ENSMUST00000137712 2410 ntAPPRIS ALT2 TSL 5 BASIC11.37□□□□□ -0.59
Retrieved 100 of 76,532 protein–RNA pairs in 11.1 ms