Protein–RNA interactions for Protein: Q2TV84

Trpm1, Transient receptor potential cation channel subfamily M member 1, mousemouse

Predictions only

Length 1,622 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trpm1Q2TV84 Fopnl-202ENSMUST00000120707 1414 ntAPPRIS ALT2 TSL 5 BASIC16.54■□□□□ 0.24
Trpm1Q2TV84 Gm11981-201ENSMUST00000139769 664 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
Trpm1Q2TV84 Gm13003-201ENSMUST00000151040 2904 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
Trpm1Q2TV84 Gm24294-201ENSMUST00000158295 277 ntBASIC16.54■□□□□ 0.24
Trpm1Q2TV84 Klf3-202ENSMUST00000166409 1562 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Trpm1Q2TV84 1700009J07Rik-202ENSMUST00000185309 920 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
Trpm1Q2TV84 Gm19927-201ENSMUST00000185792 781 ntBASIC16.54■□□□□ 0.24
Trpm1Q2TV84 Gm37391-201ENSMUST00000194891 2318 ntBASIC16.54■□□□□ 0.24
Trpm1Q2TV84 Gm45003-201ENSMUST00000205875 2158 ntBASIC16.54■□□□□ 0.24
Trpm1Q2TV84 Ces2f-203ENSMUST00000212926 1430 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
Trpm1Q2TV84 Gm36176-201ENSMUST00000218749 501 ntAPPRIS P1 BASIC16.54■□□□□ 0.24
Trpm1Q2TV84 Mcm6-201ENSMUST00000027601 2910 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Trpm1Q2TV84 D230025D16Rik-201ENSMUST00000034361 2916 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Trpm1Q2TV84 Nme6-201ENSMUST00000035053 1074 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Trpm1Q2TV84 Acyp1-201ENSMUST00000008966 648 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Trpm1Q2TV84 AU016765-201ENSMUST00000097295 946 ntTSL 2 BASIC16.54■□□□□ 0.24
Trpm1Q2TV84 Slc8a3-201ENSMUST00000064594 4379 ntAPPRIS ALT1 TSL 5 BASIC16.54■□□□□ 0.24
Trpm1Q2TV84 Ino80-202ENSMUST00000110808 3928 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
Trpm1Q2TV84 Kcnt1-211ENSMUST00000171268 3771 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
Trpm1Q2TV84 Acss1-201ENSMUST00000028944 3618 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Trpm1Q2TV84 Trpm1-210ENSMUST00000205731 2575 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
Trpm1Q2TV84 Gm37014-201ENSMUST00000194723 2253 ntBASIC16.54■□□□□ 0.24
Trpm1Q2TV84 Abr-205ENSMUST00000108408 3534 ntTSL 5 BASIC16.54■□□□□ 0.24
Trpm1Q2TV84 Ank1-209ENSMUST00000121802 8218 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
Trpm1Q2TV84 Gm42432-201ENSMUST00000197902 1617 ntBASIC16.54■□□□□ 0.24
Trpm1Q2TV84 Ffar2-201ENSMUST00000053156 2301 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Trpm1Q2TV84 Prodh-205ENSMUST00000136776 2041 ntAPPRIS ALT2 TSL 5 BASIC16.53■□□□□ 0.24
Trpm1Q2TV84 Plk2-201ENSMUST00000022212 2800 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Trpm1Q2TV84 Sp8-201ENSMUST00000063918 4478 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Trpm1Q2TV84 Ctps2-205ENSMUST00000112302 3223 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Trpm1Q2TV84 Aacs-201ENSMUST00000031445 3239 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Trpm1Q2TV84 Immt-203ENSMUST00000114151 2518 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
Trpm1Q2TV84 Nr1i3-201ENSMUST00000005820 1414 ntAPPRIS P3 TSL 1 (best) BASIC16.53■□□□□ 0.24
Trpm1Q2TV84 Grid2ip-202ENSMUST00000110733 3825 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Trpm1Q2TV84 Scgb2b25-ps-201ENSMUST00000121936 307 ntBASIC16.53■□□□□ 0.24
Trpm1Q2TV84 Gm20493-201ENSMUST00000173706 213 ntBASIC16.53■□□□□ 0.24
Trpm1Q2TV84 Gm21964-201ENSMUST00000178785 936 ntTSL 5 BASIC16.53■□□□□ 0.24
Trpm1Q2TV84 1700095B10Rik-201ENSMUST00000182349 978 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Trpm1Q2TV84 Gapdh-ps14-201ENSMUST00000183246 1002 ntBASIC16.53■□□□□ 0.24
Trpm1Q2TV84 AC164556.1-201ENSMUST00000221318 751 ntBASIC16.53■□□□□ 0.24
Trpm1Q2TV84 AC129975.1-201ENSMUST00000224816 592 ntBASIC16.53■□□□□ 0.24
Trpm1Q2TV84 Lsm3-201ENSMUST00000040607 743 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Trpm1Q2TV84 Prl7b1-201ENSMUST00000080595 925 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Trpm1Q2TV84 Cenpu-202ENSMUST00000093518 783 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Trpm1Q2TV84 Ddx19b-202ENSMUST00000065784 3104 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Trpm1Q2TV84 Myc-205ENSMUST00000161976 2338 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Trpm1Q2TV84 Myc-201ENSMUST00000022971 2338 ntAPPRIS ALT1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Trpm1Q2TV84 Tkfc-201ENSMUST00000037678 2253 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Trpm1Q2TV84 Gm13583-202ENSMUST00000151931 1476 ntTSL 2 BASIC16.53■□□□□ 0.24
Trpm1Q2TV84 Slc22a16-201ENSMUST00000019978 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
Trpm1Q2TV84 Clcn3-203ENSMUST00000093490 5518 ntAPPRIS ALT1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Trpm1Q2TV84 Slk-201ENSMUST00000026043 7278 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
Trpm1Q2TV84 Gpr143-201ENSMUST00000026383 1586 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Trpm1Q2TV84 Pyroxd1-201ENSMUST00000041852 2831 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Trpm1Q2TV84 Gm11190-201ENSMUST00000132487 3414 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Trpm1Q2TV84 Gm13425-201ENSMUST00000145389 5391 ntTSL 3 BASIC16.53■□□□□ 0.24
Trpm1Q2TV84 Osgin1-206ENSMUST00000152420 2005 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Trpm1Q2TV84 Gm44292-201ENSMUST00000205194 2364 ntBASIC16.52■□□□□ 0.24
Trpm1Q2TV84 Ighv8-11-201ENSMUST00000103536 358 ntAPPRIS P1 BASIC16.52■□□□□ 0.24
Trpm1Q2TV84 Gm23604-201ENSMUST00000104311 132 ntBASIC16.52■□□□□ 0.24
Trpm1Q2TV84 Gm27191-201ENSMUST00000145973 448 ntTSL 3 BASIC16.52■□□□□ 0.24
Trpm1Q2TV84 A230006K03Rik-202ENSMUST00000154958 901 ntTSL 5 BASIC16.52■□□□□ 0.24
Trpm1Q2TV84 Gm16165-201ENSMUST00000160140 795 ntBASIC16.52■□□□□ 0.24
Trpm1Q2TV84 Cd79b-202ENSMUST00000167143 1195 ntAPPRIS P2 TSL 1 (best) BASIC16.52■□□□□ 0.24
Trpm1Q2TV84 Nt5dc1-206ENSMUST00000213269 802 ntTSL 5 BASIC16.52■□□□□ 0.24
Trpm1Q2TV84 AC164429.1-201ENSMUST00000224210 518 ntBASIC16.52■□□□□ 0.24
Trpm1Q2TV84 Rpp38-201ENSMUST00000062672 1042 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Trpm1Q2TV84 Gm7589-201ENSMUST00000085631 534 ntBASIC16.52■□□□□ 0.24
Trpm1Q2TV84 AC137950.2-202ENSMUST00000227150 1635 ntBASIC16.52■□□□□ 0.24
Trpm1Q2TV84 Anks1-202ENSMUST00000088027 6781 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.24
Trpm1Q2TV84 Aldh3a2-203ENSMUST00000108715 2578 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
Trpm1Q2TV84 Kif22-ps-201ENSMUST00000119302 1984 ntBASIC16.52■□□□□ 0.24
Trpm1Q2TV84 Prss23os-202ENSMUST00000179361 1362 ntBASIC16.52■□□□□ 0.24
Trpm1Q2TV84 Atxn7-201ENSMUST00000022257 6853 ntAPPRIS P2 TSL 1 (best) BASIC16.52■□□□□ 0.24
Trpm1Q2TV84 B4galt4-201ENSMUST00000023482 2304 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Trpm1Q2TV84 S100pbp-204ENSMUST00000106061 4426 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Trpm1Q2TV84 Ccdc170-201ENSMUST00000019901 2151 ntAPPRIS P2 TSL 5 BASIC16.52■□□□□ 0.24
Trpm1Q2TV84 Dnmt3b-202ENSMUST00000072997 4208 ntAPPRIS P4 TSL 1 (best) BASIC16.52■□□□□ 0.24
Trpm1Q2TV84 Ank2-203ENSMUST00000182008 2474 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
Trpm1Q2TV84 Myo5a-214ENSMUST00000155282 6372 ntAPPRIS P5 TSL 5 BASIC16.52■□□□□ 0.24
Trpm1Q2TV84 Acnat2-202ENSMUST00000107698 1428 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.23
Trpm1Q2TV84 Dnaic2-201ENSMUST00000069325 2874 ntAPPRIS P1 TSL 5 BASIC16.52■□□□□ 0.23
Trpm1Q2TV84 Clec11a-201ENSMUST00000004587 2978 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
Trpm1Q2TV84 Slc4a1-201ENSMUST00000006749 4545 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
Trpm1Q2TV84 Ccnk-201ENSMUST00000101055 2627 ntAPPRIS P1 TSL 5 BASIC16.52■□□□□ 0.23
Trpm1Q2TV84 Mcm8-201ENSMUST00000028831 3179 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.23
Trpm1Q2TV84 Ssfa2-202ENSMUST00000111785 5168 ntAPPRIS P2 TSL 1 (best) BASIC16.52■□□□□ 0.23
Trpm1Q2TV84 Hint1-202ENSMUST00000117710 580 ntTSL 2 BASIC16.52■□□□□ 0.23
Trpm1Q2TV84 Gm14052-201ENSMUST00000121434 1031 ntBASIC16.52■□□□□ 0.23
Trpm1Q2TV84 Gm12705-201ENSMUST00000129460 872 ntTSL 2 BASIC16.52■□□□□ 0.23
Trpm1Q2TV84 Gm14798-201ENSMUST00000139695 1189 ntTSL 1 (best) BASIC16.52■□□□□ 0.23
Trpm1Q2TV84 Pax4-202ENSMUST00000164519 1229 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.23
Trpm1Q2TV84 Pax4-203ENSMUST00000171089 1221 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.23
Trpm1Q2TV84 4931440J10Rik-201ENSMUST00000181344 891 ntTSL 1 (best) BASIC16.52■□□□□ 0.23
Trpm1Q2TV84 Oprm1-222ENSMUST00000135502 1363 ntTSL 1 (best) BASIC16.52■□□□□ 0.23
Trpm1Q2TV84 Rrnad1-201ENSMUST00000005016 2492 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
Trpm1Q2TV84 Pdgfc-201ENSMUST00000029652 3521 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Trpm1Q2TV84 Txndc9-208ENSMUST00000195247 1699 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Trpm1Q2TV84 Nkd2-201ENSMUST00000022051 4016 ntAPPRIS P3 TSL 1 (best) BASIC16.51■□□□□ 0.23
Trpm1Q2TV84 Nrg1-211ENSMUST00000208497 2096 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Retrieved 100 of 76,532 protein–RNA pairs in 70.4 ms