Protein–RNA interactions for Protein: Q07802

Ebf1, Transcription factor COE1, mousemouse

Predictions only

Length 591 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ebf1Q07802 Pcgf2-203ENSMUST00000103149 817 ntTSL 5 BASIC12.13□□□□□ -0.47
Ebf1Q07802 Tsc22d4-204ENSMUST00000110983 1043 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Ebf1Q07802 Gm13809-201ENSMUST00000117921 597 ntBASIC12.13□□□□□ -0.47
Ebf1Q07802 Gm11511-201ENSMUST00000118146 540 ntBASIC12.13□□□□□ -0.47
Ebf1Q07802 Gm16195-201ENSMUST00000130607 442 ntTSL 2 BASIC12.13□□□□□ -0.47
Ebf1Q07802 Gm6397-201ENSMUST00000161973 1069 ntBASIC12.13□□□□□ -0.47
Ebf1Q07802 1700121N20Rik-201ENSMUST00000167922 1027 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Ebf1Q07802 9330159M07Rik-202ENSMUST00000180783 1044 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Ebf1Q07802 Calca-205ENSMUST00000205933 458 ntTSL 3 BASIC12.13□□□□□ -0.47
Ebf1Q07802 CT485607.1-201ENSMUST00000216100 85 ntBASIC12.13□□□□□ -0.47
Ebf1Q07802 Gm34045-201ENSMUST00000217700 988 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Ebf1Q07802 Prss52-201ENSMUST00000022537 1064 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Ebf1Q07802 Gm10288-201ENSMUST00000084614 537 ntBASIC12.13□□□□□ -0.47
Ebf1Q07802 Gm7551-201ENSMUST00000089593 1074 ntBASIC12.13□□□□□ -0.47
Ebf1Q07802 Gng5-202ENSMUST00000118280 2419 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Ebf1Q07802 Aebp2-206ENSMUST00000161335 2524 ntAPPRIS ALT2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Ebf1Q07802 Gm12132-201ENSMUST00000130945 1391 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Ebf1Q07802 Ccr4-202ENSMUST00000215425 1382 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Ebf1Q07802 Gypa-201ENSMUST00000063359 1848 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Ebf1Q07802 Gm42840-201ENSMUST00000200303 2251 ntBASIC12.13□□□□□ -0.47
Ebf1Q07802 Kcnt1-201ENSMUST00000037580 5881 ntAPPRIS P3 TSL 1 (best) BASIC12.13□□□□□ -0.47
Ebf1Q07802 Ino80c-204ENSMUST00000153360 2498 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Ebf1Q07802 Gm14866-201ENSMUST00000149206 2118 ntTSL 2 BASIC12.13□□□□□ -0.47
Ebf1Q07802 Pja1-204ENSMUST00000113797 1676 ntAPPRIS ALT2 TSL 2 BASIC12.13□□□□□ -0.47
Ebf1Q07802 Thrb-203ENSMUST00000091471 1758 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Ebf1Q07802 Nrf1-207ENSMUST00000115206 1879 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Ebf1Q07802 Pax5-203ENSMUST00000107825 1445 ntTSL 5 BASIC12.12□□□□□ -0.47
Ebf1Q07802 Pdp1-205ENSMUST00000108301 2635 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Ebf1Q07802 Aknad1-202ENSMUST00000133931 2603 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Ebf1Q07802 Pdlim5-201ENSMUST00000029941 5016 ntAPPRIS P3 TSL 1 (best) BASIC12.12□□□□□ -0.47
Ebf1Q07802 Rad23a-201ENSMUST00000003911 2074 ntAPPRIS P3 TSL 1 (best) BASIC12.12□□□□□ -0.47
Ebf1Q07802 Zbtb16-201ENSMUST00000093852 5114 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Ebf1Q07802 Lef1-204ENSMUST00000106341 3357 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Ebf1Q07802 Lef1-202ENSMUST00000066849 3398 ntAPPRIS ALT1 TSL 5 BASIC12.12□□□□□ -0.47
Ebf1Q07802 Rgma-202ENSMUST00000119206 3481 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Ebf1Q07802 Ndel1-202ENSMUST00000101017 1646 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Ebf1Q07802 Usp53-202ENSMUST00000197314 3586 ntTSL 5 BASIC12.12□□□□□ -0.47
Ebf1Q07802 Kcnj11-205ENSMUST00000211674 3142 ntAPPRIS P1 BASIC12.12□□□□□ -0.47
Ebf1Q07802 Trpv4-204ENSMUST00000112222 2475 ntTSL 5 BASIC12.12□□□□□ -0.47
Ebf1Q07802 Rnf225-201ENSMUST00000045870 3239 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Ebf1Q07802 Brinp2-201ENSMUST00000004133 4167 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Ebf1Q07802 Plekhd1-201ENSMUST00000140770 3535 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Ebf1Q07802 Gm26286-201ENSMUST00000104166 134 ntBASIC12.12□□□□□ -0.47
Ebf1Q07802 Cdc42se1-204ENSMUST00000107201 907 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Ebf1Q07802 Ccl1-202ENSMUST00000108189 514 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Ebf1Q07802 Cdk2ap1-202ENSMUST00000111472 648 ntAPPRIS ALT1 TSL 5 BASIC12.12□□□□□ -0.47
Ebf1Q07802 Retn-202ENSMUST00000169234 1139 ntAPPRIS P1 TSL 2 BASIC12.12□□□□□ -0.47
Ebf1Q07802 Rpl31-202ENSMUST00000178079 487 ntAPPRIS P1 TSL 2 BASIC12.12□□□□□ -0.47
Ebf1Q07802 Gm4131-201ENSMUST00000186010 1264 ntAPPRIS P1 TSL 5 BASIC12.12□□□□□ -0.47
Ebf1Q07802 Gm19891-201ENSMUST00000189771 303 ntBASIC12.12□□□□□ -0.47
Ebf1Q07802 Gm45484-201ENSMUST00000210310 1141 ntBASIC12.12□□□□□ -0.47
Ebf1Q07802 Ccl1-201ENSMUST00000021043 611 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Ebf1Q07802 Hrc-202ENSMUST00000211327 607 ntTSL 5 BASIC12.12□□□□□ -0.47
Ebf1Q07802 Gm4797-201ENSMUST00000219075 1283 ntBASIC12.12□□□□□ -0.47
Ebf1Q07802 Colec11-203ENSMUST00000220836 887 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Ebf1Q07802 Gm18974-201ENSMUST00000221478 1031 ntBASIC12.12□□□□□ -0.47
Ebf1Q07802 Recql-201ENSMUST00000032370 2112 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Ebf1Q07802 Cox6a2-201ENSMUST00000033049 680 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Ebf1Q07802 Immp1l-201ENSMUST00000037499 955 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Ebf1Q07802 Tmem258-201ENSMUST00000040372 606 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Ebf1Q07802 Tgfb2-206ENSMUST00000195201 3485 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Ebf1Q07802 Ccndbp1-201ENSMUST00000060455 1569 ntAPPRIS P2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Ebf1Q07802 Gtf2i-203ENSMUST00000111261 4381 ntAPPRIS ALT2 TSL 5 BASIC12.12□□□□□ -0.47
Ebf1Q07802 Slc30a3-206ENSMUST00000202740 1989 ntTSL 5 BASIC12.12□□□□□ -0.47
Ebf1Q07802 Rbm12b2-201ENSMUST00000063839 3327 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Ebf1Q07802 Upk3b-201ENSMUST00000062606 3530 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Ebf1Q07802 Tbl1xr1-211ENSMUST00000202747 4209 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Ebf1Q07802 Slc25a45-202ENSMUST00000125114 2599 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Ebf1Q07802 Cacna1g-202ENSMUST00000100561 8125 ntAPPRIS P3 TSL 1 (best) BASIC12.12□□□□□ -0.47
Ebf1Q07802 Arhgef3-204ENSMUST00000225949 3198 ntBASIC12.12□□□□□ -0.47
Ebf1Q07802 Irak2-201ENSMUST00000059286 3196 ntAPPRIS P3 TSL 1 (best) BASIC12.12□□□□□ -0.47
Ebf1Q07802 Lypd6-202ENSMUST00000112712 3495 ntAPPRIS P1 TSL 5 BASIC12.12□□□□□ -0.47
Ebf1Q07802 D030025P21Rik-202ENSMUST00000220643 3987 ntBASIC12.11□□□□□ -0.47
Ebf1Q07802 4930554G24Rik-201ENSMUST00000126260 1603 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Ebf1Q07802 Caln1-201ENSMUST00000086029 1801 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Ebf1Q07802 Slc38a6-206ENSMUST00000140523 3032 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Ebf1Q07802 Zfp512-208ENSMUST00000202244 3045 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Ebf1Q07802 Tm9sf2-201ENSMUST00000026624 3107 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Ebf1Q07802 Psd2-201ENSMUST00000115716 4607 ntAPPRIS P3 TSL 1 (best) BASIC12.11□□□□□ -0.47
Ebf1Q07802 Wwtr1-201ENSMUST00000029380 4697 ntAPPRIS P3 TSL 1 (best) BASIC12.11□□□□□ -0.47
Ebf1Q07802 Cdc25a-204ENSMUST00000198308 2880 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Ebf1Q07802 Mgmt-201ENSMUST00000081510 2894 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Ebf1Q07802 Sdc4-201ENSMUST00000017153 2458 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Ebf1Q07802 Ppp2r2b-202ENSMUST00000117687 2271 ntAPPRIS ALT1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Ebf1Q07802 AC157950.1-201ENSMUST00000217561 2168 ntBASIC12.11□□□□□ -0.47
Ebf1Q07802 AC159195.1-201ENSMUST00000225867 2086 ntBASIC12.11□□□□□ -0.47
Ebf1Q07802 Igtp-202ENSMUST00000094169 1767 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Ebf1Q07802 Nrsn2-201ENSMUST00000079278 1455 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Ebf1Q07802 C030034I22Rik-202ENSMUST00000188481 4231 ntBASIC12.11□□□□□ -0.47
Ebf1Q07802 1700003D09Rik-201ENSMUST00000141929 1389 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Ebf1Q07802 Gsdmcl-ps-203ENSMUST00000188367 1375 ntBASIC12.11□□□□□ -0.47
Ebf1Q07802 Ifna15-201ENSMUST00000102809 573 ntAPPRIS P1 BASIC12.11□□□□□ -0.47
Ebf1Q07802 Mup-ps26-201ENSMUST00000121751 202 ntBASIC12.11□□□□□ -0.47
Ebf1Q07802 Rbm18-202ENSMUST00000122456 781 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Ebf1Q07802 Gm15906-201ENSMUST00000124746 323 ntTSL 5 BASIC12.11□□□□□ -0.47
Ebf1Q07802 4930538E20Rik-202ENSMUST00000146717 497 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Ebf1Q07802 Cldn16-202ENSMUST00000161053 1173 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Ebf1Q07802 Gm17231-202ENSMUST00000165858 663 ntTSL 5 BASIC12.11□□□□□ -0.47
Ebf1Q07802 Gm37695-201ENSMUST00000191765 530 ntTSL 5 BASIC12.11□□□□□ -0.47
Ebf1Q07802 Gm42629-201ENSMUST00000199063 1102 ntBASIC12.11□□□□□ -0.47
Retrieved 100 of 76,532 protein–RNA pairs in 31.6 ms