Protein–RNA interactions for Protein: Q04887

Sox9, Transcription factor SOX-9, mousemouse

Predictions only

Length 507 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox9Q04887 Cd163l1-204ENSMUST00000209637 3210 ntAPPRIS P2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Sox9Q04887 Smim8-204ENSMUST00000108133 935 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Sox9Q04887 Gm11619-201ENSMUST00000117474 237 ntBASIC12.35□□□□□ -0.43
Sox9Q04887 Gm14213-201ENSMUST00000119778 768 ntBASIC12.35□□□□□ -0.43
Sox9Q04887 Rpl19-ps1-201ENSMUST00000121059 591 ntBASIC12.35□□□□□ -0.43
Sox9Q04887 Txnrd2-205ENSMUST00000126778 491 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Sox9Q04887 Gm12246-201ENSMUST00000129126 503 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Sox9Q04887 Gm15726-201ENSMUST00000144738 509 ntTSL 3 BASIC12.35□□□□□ -0.43
Sox9Q04887 1700006J14Rik-204ENSMUST00000161511 574 ntTSL 3 BASIC12.35□□□□□ -0.43
Sox9Q04887 Gm34312-201ENSMUST00000204650 1092 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Sox9Q04887 Gm6108-201ENSMUST00000208365 367 ntBASIC12.35□□□□□ -0.43
Sox9Q04887 Folr2-203ENSMUST00000210598 1204 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Sox9Q04887 Gm2553-201ENSMUST00000215986 605 ntBASIC12.35□□□□□ -0.43
Sox9Q04887 Ccdc28b-201ENSMUST00000030586 879 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Sox9Q04887 Anxa9-204ENSMUST00000164406 1611 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Sox9Q04887 Epb41-207ENSMUST00000105975 5235 ntAPPRIS ALT2 TSL 5 BASIC12.35□□□□□ -0.43
Sox9Q04887 Gm20125-205ENSMUST00000208005 1979 ntTSL 5 BASIC12.35□□□□□ -0.43
Sox9Q04887 Rufy2-203ENSMUST00000122231 2664 ntTSL 5 BASIC12.35□□□□□ -0.43
Sox9Q04887 Ap2a1-204ENSMUST00000167930 3376 ntTSL 5 BASIC12.35□□□□□ -0.43
Sox9Q04887 Psd-210ENSMUST00000225323 3398 ntAPPRIS ALT2 BASIC12.35□□□□□ -0.43
Sox9Q04887 Adam22-203ENSMUST00000088744 9245 ntAPPRIS ALT2 TSL 5 BASIC12.35□□□□□ -0.43
Sox9Q04887 Gucy2e-201ENSMUST00000021259 8331 ntAPPRIS P1 TSL 5 BASIC12.35□□□□□ -0.43
Sox9Q04887 Srsf5-201ENSMUST00000094693 1527 ntAPPRIS P3 TSL 1 (best) BASIC12.35□□□□□ -0.43
Sox9Q04887 Slc4a1ap-209ENSMUST00000202214 2806 ntAPPRIS P3 TSL 5 BASIC12.35□□□□□ -0.43
Sox9Q04887 Edrf1-201ENSMUST00000051169 5424 ntAPPRIS P2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Sox9Q04887 Nsd3-208ENSMUST00000146919 3652 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Sox9Q04887 Phldb1-213ENSMUST00000144251 3589 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Sox9Q04887 Arhgef37-201ENSMUST00000171629 3234 ntAPPRIS P1 TSL 5 BASIC12.35□□□□□ -0.43
Sox9Q04887 Gm26677-201ENSMUST00000180553 1672 ntTSL 5 BASIC12.35□□□□□ -0.43
Sox9Q04887 Cap2-201ENSMUST00000021802 3713 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Sox9Q04887 Pds5b-201ENSMUST00000016569 7417 ntAPPRIS P3 TSL 1 (best) BASIC12.34□□□□□ -0.43
Sox9Q04887 Gm44851-201ENSMUST00000205735 2309 ntBASIC12.34□□□□□ -0.43
Sox9Q04887 Slc25a45-202ENSMUST00000125114 2599 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Sox9Q04887 Ash2l-210ENSMUST00000166078 2234 ntAPPRIS ALT2 TSL 5 BASIC12.34□□□□□ -0.43
Sox9Q04887 Bhmt-201ENSMUST00000099309 2490 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Sox9Q04887 Recql-201ENSMUST00000032370 2112 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Sox9Q04887 Padi2-201ENSMUST00000030765 4774 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Sox9Q04887 Fmn2-201ENSMUST00000030039 6442 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Sox9Q04887 Slco4a1-202ENSMUST00000038259 3010 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Sox9Q04887 Tmprss11d-202ENSMUST00000122377 2256 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Sox9Q04887 Ddx39b-202ENSMUST00000172549 1770 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Sox9Q04887 Brd4-201ENSMUST00000003726 5955 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Sox9Q04887 Npr1-201ENSMUST00000029540 4066 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Sox9Q04887 Gcg-201ENSMUST00000102733 1088 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Sox9Q04887 D3Ertd751e-204ENSMUST00000119572 1011 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Sox9Q04887 Isg20-203ENSMUST00000120331 845 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Sox9Q04887 Aamdc-207ENSMUST00000138060 467 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Sox9Q04887 Fxyd5-203ENSMUST00000159924 805 ntAPPRIS P3 TSL 5 BASIC12.34□□□□□ -0.43
Sox9Q04887 Gm16167-201ENSMUST00000160428 1065 ntBASIC12.34□□□□□ -0.43
Sox9Q04887 Fxyd5-210ENSMUST00000162116 817 ntAPPRIS P3 TSL 5 BASIC12.34□□□□□ -0.43
Sox9Q04887 Gm20414-201ENSMUST00000172918 646 ntBASIC12.34□□□□□ -0.43
Sox9Q04887 Pmvk-204ENSMUST00000198440 978 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Sox9Q04887 AI839979-201ENSMUST00000200738 654 ntTSL 2 BASIC12.34□□□□□ -0.43
Sox9Q04887 Gm44507-201ENSMUST00000206249 343 ntTSL 5 BASIC12.34□□□□□ -0.43
Sox9Q04887 Gm45613-201ENSMUST00000210718 443 ntTSL 3 BASIC12.34□□□□□ -0.43
Sox9Q04887 Gm17749-201ENSMUST00000216282 690 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Sox9Q04887 CT010486.3-201ENSMUST00000224555 811 ntBASIC12.34□□□□□ -0.43
Sox9Q04887 Lgals1-201ENSMUST00000089377 800 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Sox9Q04887 Rp2-202ENSMUST00000115387 4498 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Sox9Q04887 Arl14ep-201ENSMUST00000028536 3337 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Sox9Q04887 A530013C23Rik-201ENSMUST00000130679 2555 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Sox9Q04887 Irf1-203ENSMUST00000108922 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Sox9Q04887 Pggt1b-201ENSMUST00000025354 2736 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Sox9Q04887 Evc2-201ENSMUST00000056365 4091 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Sox9Q04887 Zfp593-201ENSMUST00000030644 1994 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Sox9Q04887 Ltbp2-203ENSMUST00000163189 6470 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Sox9Q04887 Sec62-201ENSMUST00000029256 3967 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Sox9Q04887 Tmem215-202ENSMUST00000179526 2276 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Sox9Q04887 Morf4l2-202ENSMUST00000080411 1859 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Sox9Q04887 Katnal2-207ENSMUST00000137354 1482 ntTSL 5 BASIC12.34□□□□□ -0.43
Sox9Q04887 Hrct1-201ENSMUST00000095109 1452 ntAPPRIS P1 BASIC12.34□□□□□ -0.43
Sox9Q04887 Chpf2-201ENSMUST00000088295 5371 ntAPPRIS P1 TSL 2 BASIC12.33□□□□□ -0.43
Sox9Q04887 Nub1-202ENSMUST00000197407 3546 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.43
Sox9Q04887 G2e3-201ENSMUST00000054308 6803 ntAPPRIS P3 TSL 1 (best) BASIC12.33□□□□□ -0.44
Sox9Q04887 Itfg2-201ENSMUST00000001559 2320 ntAPPRIS P2 TSL 1 (best) BASIC12.33□□□□□ -0.44
Sox9Q04887 Ptprk-203ENSMUST00000218359 4669 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.44
Sox9Q04887 Scube2-201ENSMUST00000007423 3571 ntTSL 2 BASIC12.33□□□□□ -0.44
Sox9Q04887 Dlg4-203ENSMUST00000108588 3457 ntAPPRIS ALT1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Sox9Q04887 Rbl1-201ENSMUST00000029170 4862 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Sox9Q04887 Caln1-201ENSMUST00000086029 1801 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Sox9Q04887 Trav10d-201ENSMUST00000103646 406 ntAPPRIS P1 BASIC12.33□□□□□ -0.44
Sox9Q04887 Gm25053-201ENSMUST00000103982 133 ntBASIC12.33□□□□□ -0.44
Sox9Q04887 Gm25922-201ENSMUST00000104281 130 ntBASIC12.33□□□□□ -0.44
Sox9Q04887 Nudt1-205ENSMUST00000110827 744 ntAPPRIS P1 TSL 5 BASIC12.33□□□□□ -0.44
Sox9Q04887 Eef1d-207ENSMUST00000116440 896 ntAPPRIS ALT2 TSL 3 BASIC12.33□□□□□ -0.44
Sox9Q04887 1700123M08Rik-202ENSMUST00000146154 770 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Sox9Q04887 Uckl1os-207ENSMUST00000152365 442 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Sox9Q04887 Gm24679-201ENSMUST00000158762 111 ntBASIC12.33□□□□□ -0.44
Sox9Q04887 Gm16553-201ENSMUST00000160490 716 ntTSL 3 BASIC12.33□□□□□ -0.44
Sox9Q04887 Gas5-224ENSMUST00000162558 502 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Sox9Q04887 Gm37852-201ENSMUST00000193027 350 ntBASIC12.33□□□□□ -0.44
Sox9Q04887 Gm9884-201ENSMUST00000194343 1222 ntBASIC12.33□□□□□ -0.44
Sox9Q04887 Gm25053-202ENSMUST00000199731 132 ntBASIC12.33□□□□□ -0.44
Sox9Q04887 Gm43969-201ENSMUST00000204833 535 ntBASIC12.33□□□□□ -0.44
Sox9Q04887 AC170997.1-201ENSMUST00000214554 1053 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Sox9Q04887 Exog-201ENSMUST00000035094 3832 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Sox9Q04887 Hspb11-201ENSMUST00000046558 608 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Sox9Q04887 4930555K19Rik-201ENSMUST00000060066 171 ntBASIC12.33□□□□□ -0.44
Sox9Q04887 Vmn1r44-201ENSMUST00000089420 1108 ntAPPRIS P1 BASIC12.33□□□□□ -0.44
Sox9Q04887 Adamts7-207ENSMUST00000147250 4833 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.44
Retrieved 100 of 76,532 protein–RNA pairs in 38.2 ms