Protein–RNA interactions for Protein: P85442

Vgll3, Transcription cofactor vestigial-like protein 3, mousemouse

Predictions only

Length 326 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vgll3P85442 Cops5-201ENSMUST00000027050 1698 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Vgll3P85442 Ctnnal1-201ENSMUST00000045142 3664 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Vgll3P85442 Stk33-203ENSMUST00000121378 1304 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Vgll3P85442 Sh3bgr-201ENSMUST00000048770 1321 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Vgll3P85442 Aire-207ENSMUST00000140636 1615 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Vgll3P85442 Gm4810-201ENSMUST00000177721 1607 ntBASIC12.2□□□□□ -0.46
Vgll3P85442 Gm7933-201ENSMUST00000191215 2255 ntBASIC12.2□□□□□ -0.46
Vgll3P85442 Tro-201ENSMUST00000087253 3224 ntAPPRIS ALT2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Vgll3P85442 Hist1h3e-201ENSMUST00000105107 836 ntAPPRIS P1 BASIC12.2□□□□□ -0.46
Vgll3P85442 Tex22-202ENSMUST00000109729 735 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Vgll3P85442 Ppil3-203ENSMUST00000114348 1033 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Vgll3P85442 Tspan5-203ENSMUST00000121826 1114 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Vgll3P85442 Gm17613-201ENSMUST00000138893 669 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Vgll3P85442 Gm15862-201ENSMUST00000146349 361 ntTSL 2 BASIC12.2□□□□□ -0.46
Vgll3P85442 2310061I04Rik-204ENSMUST00000148721 1293 ntAPPRIS P1 TSL 5 BASIC12.2□□□□□ -0.46
Vgll3P85442 Gm28913-201ENSMUST00000186240 364 ntTSL 3 BASIC12.2□□□□□ -0.46
Vgll3P85442 1700021A07Rik-203ENSMUST00000188024 404 ntTSL 3 BASIC12.2□□□□□ -0.46
Vgll3P85442 Gm43767-201ENSMUST00000198933 381 ntBASIC12.2□□□□□ -0.46
Vgll3P85442 Pomc-201ENSMUST00000020990 1031 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Vgll3P85442 AC164567.1-201ENSMUST00000219185 960 ntBASIC12.2□□□□□ -0.46
Vgll3P85442 AC158982.1-201ENSMUST00000228377 901 ntBASIC12.2□□□□□ -0.46
Vgll3P85442 Tiam2-202ENSMUST00000169838 5725 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Vgll3P85442 Pfkfb3-216ENSMUST00000191668 2216 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Vgll3P85442 Aktip-203ENSMUST00000120349 2153 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Vgll3P85442 Aspm-201ENSMUST00000053364 9867 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Vgll3P85442 Trp53-202ENSMUST00000108657 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Vgll3P85442 Avpr2-201ENSMUST00000033765 1812 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Vgll3P85442 Scrn3-201ENSMUST00000090811 3309 ntAPPRIS P2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Vgll3P85442 Cars-201ENSMUST00000010899 3222 ntAPPRIS P3 TSL 1 (best) BASIC12.2□□□□□ -0.46
Vgll3P85442 Hdac7-208ENSMUST00000121514 3767 ntAPPRIS ALT2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Vgll3P85442 Slc29a3-201ENSMUST00000117513 5240 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Vgll3P85442 Ampd3-206ENSMUST00000170374 3489 ntAPPRIS P2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Vgll3P85442 Cep95-202ENSMUST00000103068 2597 ntAPPRIS ALT2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Vgll3P85442 Sh2d3c-201ENSMUST00000074248 3092 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Vgll3P85442 Uchl1os-201ENSMUST00000152002 1685 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Vgll3P85442 Camk1g-201ENSMUST00000016323 2469 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Vgll3P85442 Sirt5-201ENSMUST00000066804 1367 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Vgll3P85442 Gm28945-201ENSMUST00000187780 2165 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Vgll3P85442 Gm29622-201ENSMUST00000190914 2165 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Vgll3P85442 Cyp7b1-201ENSMUST00000035625 2166 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Vgll3P85442 Stx16-201ENSMUST00000044638 3731 ntAPPRIS ALT2 TSL 5 BASIC12.19□□□□□ -0.46
Vgll3P85442 Esrrb-206ENSMUST00000167891 1344 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Vgll3P85442 Mansc1-201ENSMUST00000047443 2376 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Vgll3P85442 Larp1b-205ENSMUST00000191805 1581 ntAPPRIS P2 TSL 5 BASIC12.19□□□□□ -0.46
Vgll3P85442 Clu-201ENSMUST00000022616 1810 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Vgll3P85442 Cnot8-202ENSMUST00000108843 2099 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Vgll3P85442 Rpl37rt-201ENSMUST00000100847 682 ntTSL 3 BASIC12.19□□□□□ -0.46
Vgll3P85442 Tnfrsf13b-202ENSMUST00000101103 750 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Vgll3P85442 Mrpl55-204ENSMUST00000108786 757 ntTSL 2 BASIC12.19□□□□□ -0.46
Vgll3P85442 Adprm-201ENSMUST00000116363 1283 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Vgll3P85442 Platr13-201ENSMUST00000133945 375 ntTSL 5 BASIC12.19□□□□□ -0.46
Vgll3P85442 Gm27430-201ENSMUST00000184585 107 ntBASIC12.19□□□□□ -0.46
Vgll3P85442 Gm44333-201ENSMUST00000197168 107 ntBASIC12.19□□□□□ -0.46
Vgll3P85442 AC125070.1-201ENSMUST00000223523 555 ntTSL 5 BASIC12.19□□□□□ -0.46
Vgll3P85442 Rab33a-201ENSMUST00000033430 1158 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Vgll3P85442 Klk1-201ENSMUST00000075162 954 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Vgll3P85442 Taok3-210ENSMUST00000179276 4302 ntAPPRIS P1 TSL 5 BASIC12.19□□□□□ -0.46
Vgll3P85442 Lyar-202ENSMUST00000114106 1504 ntAPPRIS P1 TSL 5 BASIC12.19□□□□□ -0.46
Vgll3P85442 Zfp68-201ENSMUST00000063262 2254 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Vgll3P85442 Nrap-202ENSMUST00000073536 5501 ntAPPRIS P4 TSL 1 (best) BASIC12.19□□□□□ -0.46
Vgll3P85442 Usp5-201ENSMUST00000047510 3213 ntAPPRIS P3 TSL 1 (best) BASIC12.19□□□□□ -0.46
Vgll3P85442 Nr1i3-208ENSMUST00000155126 2980 ntTSL 2 BASIC12.19□□□□□ -0.46
Vgll3P85442 Fn1-213ENSMUST00000188674 7680 ntAPPRIS ALT2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Vgll3P85442 Fn1-217ENSMUST00000190780 7694 ntAPPRIS ALT2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Vgll3P85442 Upp2-201ENSMUST00000059102 2498 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Vgll3P85442 Gm26690-201ENSMUST00000181457 1997 ntTSL 5 BASIC12.19□□□□□ -0.46
Vgll3P85442 2610028D06Rik-201ENSMUST00000215216 1713 ntBASIC12.19□□□□□ -0.46
Vgll3P85442 Rnf180-201ENSMUST00000069686 1728 ntAPPRIS P2 TSL 5 BASIC12.19□□□□□ -0.46
Vgll3P85442 Cacna1c-203ENSMUST00000112790 7631 ntAPPRIS ALT2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Vgll3P85442 Pdss2-202ENSMUST00000159139 1467 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Vgll3P85442 Gm43481-201ENSMUST00000201715 3672 ntBASIC12.19□□□□□ -0.46
Vgll3P85442 Stat5a-201ENSMUST00000004145 3888 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Vgll3P85442 Nedd4l-211ENSMUST00000226058 3393 ntBASIC12.19□□□□□ -0.46
Vgll3P85442 Rab8a-201ENSMUST00000003121 4550 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Vgll3P85442 Gm26527-201ENSMUST00000180416 1948 ntTSL 5 BASIC12.19□□□□□ -0.46
Vgll3P85442 Smarca5-ps-201ENSMUST00000121843 3123 ntBASIC12.19□□□□□ -0.46
Vgll3P85442 2810408A11Rik-202ENSMUST00000100969 1437 ntAPPRIS ALT2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Vgll3P85442 Srek1ip1-201ENSMUST00000022230 2365 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Vgll3P85442 Ing1-204ENSMUST00000210041 1881 ntTSL 5 BASIC12.19□□□□□ -0.46
Vgll3P85442 Flot2-202ENSMUST00000073660 2568 ntAPPRIS ALT1 TSL 5 BASIC12.19□□□□□ -0.46
Vgll3P85442 Tef-202ENSMUST00000109553 4401 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Vgll3P85442 Klf8-201ENSMUST00000039545 4407 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Vgll3P85442 Retsat-201ENSMUST00000070597 3027 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Vgll3P85442 Fn1-216ENSMUST00000189821 7410 ntAPPRIS ALT2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Vgll3P85442 Atp4a-201ENSMUST00000005692 3485 ntAPPRIS P1 TSL 5 BASIC12.19□□□□□ -0.46
Vgll3P85442 Pxmp4-201ENSMUST00000000896 2789 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Vgll3P85442 Henmt1-203ENSMUST00000106586 1838 ntAPPRIS P2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Vgll3P85442 Mypn-201ENSMUST00000095580 5246 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Vgll3P85442 Uox-201ENSMUST00000029837 2737 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Vgll3P85442 Ttpal-207ENSMUST00000171696 4522 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Vgll3P85442 Ntng2-204ENSMUST00000102873 1593 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Vgll3P85442 Cap2-202ENSMUST00000119341 2454 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Vgll3P85442 Rtraf-201ENSMUST00000022341 1562 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Vgll3P85442 Tspan31-201ENSMUST00000060991 1556 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Vgll3P85442 Bace1-202ENSMUST00000078111 4041 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Vgll3P85442 Myh2-201ENSMUST00000018641 6018 ntAPPRIS P1 TSL 5 BASIC12.18□□□□□ -0.46
Vgll3P85442 Pik3c3-202ENSMUST00000115811 3084 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Vgll3P85442 AC126549.2-201ENSMUST00000223997 1976 ntBASIC12.18□□□□□ -0.46
Vgll3P85442 Gm38089-201ENSMUST00000193585 1514 ntBASIC12.18□□□□□ -0.46
Vgll3P85442 Ccdc33-210ENSMUST00000215944 3012 ntAPPRIS ALT2 TSL 5 BASIC12.18□□□□□ -0.46
Retrieved 100 of 76,532 protein–RNA pairs in 53.4 ms