Protein–RNA interactions for Protein: P70178

Six5, Homeobox protein SIX5, mousemouse

Predictions only

Length 719 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Six5P70178 Zfp1-201ENSMUST00000077791 1811 ntAPPRIS P3 TSL 1 (best) BASIC11.17□□□□□ -0.62
Six5P70178 Pla2g3-202ENSMUST00000064265 2566 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Six5P70178 Csf1-202ENSMUST00000118593 3058 ntAPPRIS ALT2 TSL 1 (best) BASIC11.17□□□□□ -0.62
Six5P70178 Mrc2-201ENSMUST00000021038 3335 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
Six5P70178 Ighv5-4-201ENSMUST00000103444 425 ntAPPRIS P1 BASIC11.17□□□□□ -0.62
Six5P70178 Gm11660-201ENSMUST00000120955 412 ntBASIC11.17□□□□□ -0.62
Six5P70178 Gm8343-201ENSMUST00000182705 994 ntBASIC11.17□□□□□ -0.62
Six5P70178 Gm27627-201ENSMUST00000183644 150 ntBASIC11.17□□□□□ -0.62
Six5P70178 Gm19287-201ENSMUST00000203190 358 ntBASIC11.17□□□□□ -0.62
Six5P70178 1700011D18Rik-201ENSMUST00000205762 277 ntBASIC11.17□□□□□ -0.62
Six5P70178 Gm45224-201ENSMUST00000208203 414 ntBASIC11.17□□□□□ -0.62
Six5P70178 Gm8913-201ENSMUST00000209491 641 ntBASIC11.17□□□□□ -0.62
Six5P70178 Ankrd2-201ENSMUST00000026172 1100 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Six5P70178 Cldn18-202ENSMUST00000112882 1750 ntAPPRIS ALT1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Six5P70178 Cpa5-202ENSMUST00000115138 1778 ntTSL 5 BASIC11.17□□□□□ -0.62
Six5P70178 Tom1-201ENSMUST00000078847 1769 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
Six5P70178 Nfe2l1-210ENSMUST00000167110 3547 ntAPPRIS ALT2 TSL 2 BASIC11.17□□□□□ -0.62
Six5P70178 Acacb-201ENSMUST00000031583 8482 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Six5P70178 Trim46-201ENSMUST00000041022 3122 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Six5P70178 Rgs17-203ENSMUST00000117676 1651 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Six5P70178 Ambra1-203ENSMUST00000099712 5021 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Six5P70178 Prkag3-206ENSMUST00000188073 2832 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Six5P70178 Cdip1-203ENSMUST00000118703 2554 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Six5P70178 Trappc5-202ENSMUST00000207787 4411 ntAPPRIS P1 BASIC11.17□□□□□ -0.62
Six5P70178 Pgghg-204ENSMUST00000164580 3001 ntAPPRIS ALT2 TSL 5 BASIC11.17□□□□□ -0.62
Six5P70178 Tmc4-201ENSMUST00000038743 2310 ntAPPRIS P2 TSL 1 (best) BASIC11.17□□□□□ -0.62
Six5P70178 Cyth4-201ENSMUST00000043069 2791 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Six5P70178 Gm45871-202ENSMUST00000209969 1368 ntTSL 5 BASIC11.16□□□□□ -0.62
Six5P70178 E330021D16Rik-203ENSMUST00000204830 1813 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Six5P70178 Cercam-201ENSMUST00000047521 2715 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Six5P70178 Patj-201ENSMUST00000030290 2495 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
Six5P70178 Zfp568-201ENSMUST00000074322 2016 ntAPPRIS P3 TSL 5 BASIC11.16□□□□□ -0.62
Six5P70178 Mob3a-201ENSMUST00000003438 2682 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Six5P70178 Car10-206ENSMUST00000107863 3334 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Six5P70178 Cbln3-201ENSMUST00000063871 4866 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Six5P70178 E2f7-209ENSMUST00000174857 2865 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
Six5P70178 Gm10152-201ENSMUST00000193475 1344 ntBASIC11.16□□□□□ -0.62
Six5P70178 Mfsd4a-204ENSMUST00000126927 2422 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
Six5P70178 Kcnj5-203ENSMUST00000216033 2440 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
Six5P70178 Rbm5-201ENSMUST00000035199 3064 ntAPPRIS ALT1 TSL 5 BASIC11.16□□□□□ -0.62
Six5P70178 Rnf144a-202ENSMUST00000062149 4812 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Six5P70178 Cerk-203ENSMUST00000156546 2162 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
Six5P70178 Gm43760-201ENSMUST00000202120 3015 ntBASIC11.16□□□□□ -0.62
Six5P70178 Lysmd1-201ENSMUST00000066386 2394 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Six5P70178 Ush1c-209ENSMUST00000222454 2580 ntAPPRIS ALT2 TSL 5 BASIC11.16□□□□□ -0.62
Six5P70178 Pafah1b3-202ENSMUST00000108410 689 ntTSL 3 BASIC11.16□□□□□ -0.62
Six5P70178 Nexmif-203ENSMUST00000118314 11476 ntAPPRIS ALT2 TSL 1 (best) BASIC11.16□□□□□ -0.62
Six5P70178 Gm10863-201ENSMUST00000130745 438 ntTSL 3 BASIC11.16□□□□□ -0.62
Six5P70178 Ggt1-208ENSMUST00000134503 2140 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Six5P70178 4930483J18Rik-202ENSMUST00000138715 1093 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
Six5P70178 Fancc-217ENSMUST00000163091 2995 ntAPPRIS ALT2 TSL 5 BASIC11.16□□□□□ -0.62
Six5P70178 Bloc1s2-ps-201ENSMUST00000183232 432 ntBASIC11.16□□□□□ -0.62
Six5P70178 Gm11523-203ENSMUST00000184482 802 ntTSL 3 BASIC11.16□□□□□ -0.62
Six5P70178 1700020N18Rik-201ENSMUST00000188956 547 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
Six5P70178 Ighv5-7-201ENSMUST00000192302 244 ntBASIC11.16□□□□□ -0.62
Six5P70178 Gm17827-201ENSMUST00000211825 742 ntBASIC11.16□□□□□ -0.62
Six5P70178 4930578M07Rik-202ENSMUST00000212946 552 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
Six5P70178 Olfr981-201ENSMUST00000059859 997 ntAPPRIS P1 BASIC11.16□□□□□ -0.62
Six5P70178 Adm2-201ENSMUST00000066991 1043 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Six5P70178 Hist1h3a-201ENSMUST00000091701 534 ntAPPRIS P1 BASIC11.16□□□□□ -0.62
Six5P70178 H2-T10-201ENSMUST00000166442 1481 ntAPPRIS P1 TSL 5 BASIC11.16□□□□□ -0.62
Six5P70178 Paqr5-201ENSMUST00000034817 3566 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Six5P70178 Oprm1-205ENSMUST00000078634 1695 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
Six5P70178 Phykpl-206ENSMUST00000167797 3116 ntAPPRIS P2 TSL 1 (best) BASIC11.16□□□□□ -0.62
Six5P70178 Pofut1-201ENSMUST00000049863 5600 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Six5P70178 Mapk4-202ENSMUST00000159162 3514 ntTSL 5 BASIC11.16□□□□□ -0.62
Six5P70178 Olfr239-202ENSMUST00000213731 3690 ntTSL 5 BASIC11.16□□□□□ -0.62
Six5P70178 Cyb5rl-202ENSMUST00000106756 1604 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
Six5P70178 Als2cl-203ENSMUST00000130386 5056 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Six5P70178 Spdye4a-201ENSMUST00000085733 1819 ntAPPRIS P2 TSL 1 (best) BASIC11.16□□□□□ -0.62
Six5P70178 Kars-201ENSMUST00000034426 2008 ntAPPRIS P3 TSL 1 (best) BASIC11.16□□□□□ -0.62
Six5P70178 H2-Q1-201ENSMUST00000073208 2024 ntAPPRIS P2 TSL 1 (best) BASIC11.16□□□□□ -0.62
Six5P70178 Wasf2-202ENSMUST00000105912 2236 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Six5P70178 Gabbr1-203ENSMUST00000172792 4036 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
Six5P70178 Armt1-203ENSMUST00000118544 5044 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
Six5P70178 Umod-206ENSMUST00000209095 2571 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Six5P70178 Fcrl1-201ENSMUST00000072480 1980 ntAPPRIS P3 TSL 1 (best) BASIC11.16□□□□□ -0.62
Six5P70178 Art3-201ENSMUST00000113083 1561 ntAPPRIS P3 TSL 5 BASIC11.16□□□□□ -0.62
Six5P70178 Snap23-202ENSMUST00000110711 2723 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Six5P70178 Gm45501-201ENSMUST00000211468 2526 ntBASIC11.15□□□□□ -0.62
Six5P70178 Kcna10-201ENSMUST00000055064 1913 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Six5P70178 Rasal2-204ENSMUST00000132699 4013 ntAPPRIS ALT2 TSL 5 BASIC11.15□□□□□ -0.62
Six5P70178 Tpra1-218ENSMUST00000203185 1718 ntAPPRIS P1 TSL 5 BASIC11.15□□□□□ -0.62
Six5P70178 Spatc1l-201ENSMUST00000009259 1332 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Six5P70178 Mettl27-201ENSMUST00000047196 2808 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Six5P70178 Dctn1-205ENSMUST00000113919 4292 ntAPPRIS P3 TSL 1 (best) BASIC11.15□□□□□ -0.62
Six5P70178 Slc7a3-201ENSMUST00000073927 2232 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Six5P70178 Eogt-201ENSMUST00000054344 4424 ntAPPRIS P2 TSL 1 (best) BASIC11.15□□□□□ -0.62
Six5P70178 Tspan9-202ENSMUST00000112171 2584 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Six5P70178 Psap-203ENSMUST00000165878 2564 ntAPPRIS ALT2 TSL 1 (best) BASIC11.15□□□□□ -0.62
Six5P70178 Rara-207ENSMUST00000164748 3129 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Six5P70178 Slc25a13-203ENSMUST00000188414 3121 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Six5P70178 Scn10a-201ENSMUST00000084787 6416 ntAPPRIS P2 TSL 5 BASIC11.15□□□□□ -0.62
Six5P70178 Slc44a2-201ENSMUST00000034697 3456 ntAPPRIS P2 TSL 1 (best) BASIC11.15□□□□□ -0.62
Six5P70178 Gm14441-201ENSMUST00000121960 540 ntBASIC11.15□□□□□ -0.62
Six5P70178 Gm12749-201ENSMUST00000122138 1159 ntBASIC11.15□□□□□ -0.62
Six5P70178 Gm12130-201ENSMUST00000133599 639 ntTSL 1 (best) BASIC11.15□□□□□ -0.62
Six5P70178 G630018N14Rik-201ENSMUST00000135656 1231 ntTSL 1 (best) BASIC11.15□□□□□ -0.62
Six5P70178 Hnf4aos-203ENSMUST00000141329 839 ntTSL 1 (best) BASIC11.15□□□□□ -0.62
Six5P70178 Glmp-208ENSMUST00000176519 447 ntTSL 5 BASIC11.15□□□□□ -0.62
Retrieved 100 of 76,532 protein–RNA pairs in 36.5 ms