Protein–RNA interactions for Protein: P61620

Sec61a1, Protein transport protein Sec61 subunit alpha isoform 1, mousemouse

Known RBP Predictions only

Length 476 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sec61a1P61620 C030047K22Rik-201ENSMUST00000150382 1164 ntTSL 1 (best) BASIC10.54□□□□□ -0.72
Sec61a1P61620 1700066O22Rik-203ENSMUST00000150994 961 ntTSL 1 (best) BASIC10.54□□□□□ -0.72
Sec61a1P61620 Snhg17-206ENSMUST00000152125 1046 ntTSL 3 BASIC10.54□□□□□ -0.72
Sec61a1P61620 Gm2310-201ENSMUST00000179217 1131 ntAPPRIS P1 TSL 5 BASIC10.54□□□□□ -0.72
Sec61a1P61620 Olfr1414-202ENSMUST00000189174 1159 ntAPPRIS P1 TSL 3 BASIC10.54□□□□□ -0.72
Sec61a1P61620 Gm38092-201ENSMUST00000195600 653 ntBASIC10.54□□□□□ -0.72
Sec61a1P61620 Plpbp-205ENSMUST00000209856 3954 ntTSL 1 (best) BASIC10.54□□□□□ -0.72
Sec61a1P61620 Kdelr1-203ENSMUST00000211234 832 ntTSL 2 BASIC10.54□□□□□ -0.72
Sec61a1P61620 Btrc-209ENSMUST00000224478 2194 ntBASIC10.54□□□□□ -0.72
Sec61a1P61620 Mea1-201ENSMUST00000002845 840 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Sec61a1P61620 Atp9a-201ENSMUST00000029060 3529 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Sec61a1P61620 Ttll10-202ENSMUST00000051509 2304 ntAPPRIS P2 TSL 1 (best) BASIC10.54□□□□□ -0.72
Sec61a1P61620 Krtap19-9a-201ENSMUST00000062005 168 ntAPPRIS P1 BASIC10.54□□□□□ -0.72
Sec61a1P61620 Mrps21-201ENSMUST00000067298 488 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Sec61a1P61620 Saa3-201ENSMUST00000006956 555 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Sec61a1P61620 Serpina11-201ENSMUST00000074693 1447 ntAPPRIS P3 TSL 1 (best) BASIC10.54□□□□□ -0.72
Sec61a1P61620 Trpt1-201ENSMUST00000088223 1142 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Sec61a1P61620 Olfr1209-201ENSMUST00000099809 933 ntAPPRIS P1 BASIC10.54□□□□□ -0.72
Sec61a1P61620 Arhgap20-204ENSMUST00000130405 3881 ntAPPRIS ALT2 TSL 5 BASIC10.54□□□□□ -0.72
Sec61a1P61620 Phykpl-206ENSMUST00000167797 3116 ntAPPRIS P2 TSL 1 (best) BASIC10.54□□□□□ -0.72
Sec61a1P61620 Lgr5-206ENSMUST00000172806 2652 ntTSL 5 BASIC10.54□□□□□ -0.72
Sec61a1P61620 Arhgef15-203ENSMUST00000108671 4372 ntAPPRIS P1 TSL 5 BASIC10.54□□□□□ -0.72
Sec61a1P61620 Gm44260-201ENSMUST00000204946 2094 ntBASIC10.54□□□□□ -0.72
Sec61a1P61620 Gm28590-201ENSMUST00000185679 1609 ntTSL 1 (best) BASIC10.54□□□□□ -0.72
Sec61a1P61620 Pcdhga6-201ENSMUST00000195823 4733 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Sec61a1P61620 Tmem161a-201ENSMUST00000002413 3018 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Sec61a1P61620 Dnd1-201ENSMUST00000061522 1451 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Sec61a1P61620 Myh10-204ENSMUST00000108673 1315 ntTSL 1 (best) BASIC10.54□□□□□ -0.72
Sec61a1P61620 Nefl-201ENSMUST00000022639 3380 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Sec61a1P61620 Slc38a8-201ENSMUST00000036748 2623 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Sec61a1P61620 Tmem140-201ENSMUST00000074949 2614 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Sec61a1P61620 Kifc5b-201ENSMUST00000078961 2627 ntAPPRIS P1 TSL 5 BASIC10.54□□□□□ -0.72
Sec61a1P61620 Patl1-201ENSMUST00000061618 4221 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Sec61a1P61620 Dnmt3l-201ENSMUST00000000746 1676 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Sec61a1P61620 Vps18-201ENSMUST00000037280 4054 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Sec61a1P61620 Gm37580-201ENSMUST00000192408 2800 ntBASIC10.53□□□□□ -0.72
Sec61a1P61620 Wdr53-201ENSMUST00000023474 1394 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Sec61a1P61620 Ces1d-201ENSMUST00000034172 2004 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Sec61a1P61620 Slc6a5-201ENSMUST00000056442 7065 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Sec61a1P61620 Ddx55-202ENSMUST00000111438 2737 ntTSL 2 BASIC10.53□□□□□ -0.72
Sec61a1P61620 Erich1-201ENSMUST00000110813 1557 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Sec61a1P61620 Kcnma1-205ENSMUST00000145596 12094 ntAPPRIS ALT2 BASIC10.53□□□□□ -0.72
Sec61a1P61620 Egfr-202ENSMUST00000102884 2943 ntTSL 1 (best) BASIC10.53□□□□□ -0.72
Sec61a1P61620 Cobl-202ENSMUST00000109650 5271 ntAPPRIS ALT2 TSL 5 BASIC10.53□□□□□ -0.72
Sec61a1P61620 Gmppb-201ENSMUST00000047947 1429 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Sec61a1P61620 Nek5-202ENSMUST00000209656 2253 ntAPPRIS ALT2 TSL 1 (best) BASIC10.53□□□□□ -0.72
Sec61a1P61620 0610010K14Rik-203ENSMUST00000100950 545 ntTSL 2 BASIC10.53□□□□□ -0.72
Sec61a1P61620 Styxl1-202ENSMUST00000111161 963 ntTSL 1 (best) BASIC10.53□□□□□ -0.72
Sec61a1P61620 Dnase1l1-203ENSMUST00000114189 755 ntTSL 3 BASIC10.53□□□□□ -0.72
Sec61a1P61620 Adamtsl1-204ENSMUST00000120678 977 ntTSL 1 (best) BASIC10.53□□□□□ -0.72
Sec61a1P61620 Gm28638-201ENSMUST00000188152 288 ntTSL 5 BASIC10.53□□□□□ -0.72
Sec61a1P61620 Gm28085-201ENSMUST00000189281 1137 ntTSL 1 (best) BASIC10.53□□□□□ -0.72
Sec61a1P61620 Gm4598-201ENSMUST00000206756 1080 ntTSL 1 (best) BASIC10.53□□□□□ -0.72
Sec61a1P61620 Gm32635-201ENSMUST00000221493 1162 ntTSL 1 (best) BASIC10.53□□□□□ -0.72
Sec61a1P61620 Morn3-201ENSMUST00000031437 1128 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Sec61a1P61620 Tsc22d4-201ENSMUST00000031738 1043 ntTSL 3 BASIC10.53□□□□□ -0.72
Sec61a1P61620 Ggact-201ENSMUST00000038075 1076 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Sec61a1P61620 Gm6169-201ENSMUST00000071118 1030 ntAPPRIS P1 BASIC10.53□□□□□ -0.72
Sec61a1P61620 Gm17080-201ENSMUST00000087588 811 ntTSL 5 BASIC10.53□□□□□ -0.72
Sec61a1P61620 Adgrl3-201ENSMUST00000036068 6203 ntAPPRIS ALT2 TSL 5 BASIC10.53□□□□□ -0.72
Sec61a1P61620 Adgrl3-202ENSMUST00000072521 6203 ntAPPRIS P3 TSL 5 BASIC10.53□□□□□ -0.72
Sec61a1P61620 Mthfd1l-202ENSMUST00000117291 3669 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Sec61a1P61620 Rsph3b-201ENSMUST00000024572 1614 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Sec61a1P61620 Tbc1d14-204ENSMUST00000130417 2665 ntTSL 5 BASIC10.53□□□□□ -0.72
Sec61a1P61620 5031434O11Rik-201ENSMUST00000180404 3731 ntTSL 1 (best) BASIC10.53□□□□□ -0.72
Sec61a1P61620 Rps6kl1-202ENSMUST00000221972 2881 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Sec61a1P61620 Rgs11-201ENSMUST00000025020 2006 ntAPPRIS P2 TSL 2 BASIC10.53□□□□□ -0.72
Sec61a1P61620 Gcc1-202ENSMUST00000090511 4650 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Sec61a1P61620 Mmel1-204ENSMUST00000105635 2592 ntAPPRIS ALT2 TSL 5 BASIC10.53□□□□□ -0.72
Sec61a1P61620 AC166359.1-201ENSMUST00000220243 1871 ntBASIC10.53□□□□□ -0.72
Sec61a1P61620 Tpx2-201ENSMUST00000028969 3654 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Sec61a1P61620 Banp-210ENSMUST00000173254 1521 ntAPPRIS P1 TSL 5 BASIC10.53□□□□□ -0.72
Sec61a1P61620 Prag1-201ENSMUST00000110492 4780 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Sec61a1P61620 P2ry1-201ENSMUST00000029331 3886 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Sec61a1P61620 Fam107b-201ENSMUST00000027965 3156 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Sec61a1P61620 Tekt3-201ENSMUST00000035732 1748 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Sec61a1P61620 Ocln-201ENSMUST00000022140 2839 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Sec61a1P61620 Mmp25-201ENSMUST00000024696 3373 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.72
Sec61a1P61620 Gm26799-201ENSMUST00000180959 1361 ntTSL 1 (best) BASIC10.52□□□□□ -0.72
Sec61a1P61620 Parp14-201ENSMUST00000042665 7417 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.72
Sec61a1P61620 Chchd3-201ENSMUST00000066379 1550 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.72
Sec61a1P61620 Cdh20-201ENSMUST00000062528 4012 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.72
Sec61a1P61620 Tspyl4-201ENSMUST00000047935 3879 ntAPPRIS P1 BASIC10.52□□□□□ -0.72
Sec61a1P61620 Cln3-201ENSMUST00000032962 2386 ntAPPRIS P2 TSL 1 (best) BASIC10.52□□□□□ -0.73
Sec61a1P61620 Gm6992-201ENSMUST00000217973 1607 ntBASIC10.52□□□□□ -0.73
Sec61a1P61620 Syt15-202ENSMUST00000119693 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC10.52□□□□□ -0.73
Sec61a1P61620 Gm15941-205ENSMUST00000140044 1825 ntTSL 1 (best) BASIC10.52□□□□□ -0.73
Sec61a1P61620 Tbl2-204ENSMUST00000153183 7488 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
Sec61a1P61620 Inpp4a-206ENSMUST00000132615 3038 ntTSL 5 BASIC10.52□□□□□ -0.73
Sec61a1P61620 Iqgap3-201ENSMUST00000071812 5756 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
Sec61a1P61620 Gm13394-201ENSMUST00000121658 1000 ntBASIC10.52□□□□□ -0.73
Sec61a1P61620 Gm14760-201ENSMUST00000121831 999 ntBASIC10.52□□□□□ -0.73
Sec61a1P61620 Aamdc-210ENSMUST00000146605 642 ntTSL 3 BASIC10.52□□□□□ -0.73
Sec61a1P61620 Igdcc4-203ENSMUST00000166273 778 ntTSL 1 (best) BASIC10.52□□□□□ -0.73
Sec61a1P61620 S100a14-202ENSMUST00000167598 1059 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
Sec61a1P61620 Gm27017-201ENSMUST00000183031 656 ntTSL 3 BASIC10.52□□□□□ -0.73
Sec61a1P61620 Gm28139-201ENSMUST00000189480 643 ntTSL 5 BASIC10.52□□□□□ -0.73
Sec61a1P61620 Gm8176-201ENSMUST00000191297 1099 ntBASIC10.52□□□□□ -0.73
Sec61a1P61620 1700045I11Rik-201ENSMUST00000194752 493 ntBASIC10.52□□□□□ -0.73
Sec61a1P61620 Snhg8-203ENSMUST00000199645 528 ntTSL 1 (best) BASIC10.52□□□□□ -0.73
Retrieved 100 of 76,532 protein–RNA pairs in 55.2 ms