Protein–RNA interactions for Protein: P58771

Tpm1, Tropomyosin alpha-1 chain, mousemouse

Predictions only

Length 284 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tpm1P58771 Enah-201ENSMUST00000078719 2889 ntAPPRIS P3 TSL 1 (best) BASIC13.29□□□□□ -0.28
Tpm1P58771 5330417C22Rik-202ENSMUST00000106625 5836 ntAPPRIS P1 TSL 5 BASIC13.29□□□□□ -0.28
Tpm1P58771 Kir3dl1-201ENSMUST00000113104 1031 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Tpm1P58771 Gm9431-201ENSMUST00000119765 1051 ntBASIC13.29□□□□□ -0.28
Tpm1P58771 Gm12201-201ENSMUST00000120657 1234 ntBASIC13.29□□□□□ -0.28
Tpm1P58771 Isg20-204ENSMUST00000121645 1087 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Tpm1P58771 4930478K11Rik-201ENSMUST00000181875 715 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Tpm1P58771 Gm27023-201ENSMUST00000182372 285 ntBASIC13.29□□□□□ -0.28
Tpm1P58771 1700065I16Rik-202ENSMUST00000185477 813 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Tpm1P58771 Gm37753-201ENSMUST00000192178 439 ntTSL 2 BASIC13.29□□□□□ -0.28
Tpm1P58771 Gm18584-201ENSMUST00000203098 964 ntBASIC13.29□□□□□ -0.28
Tpm1P58771 AC125209.1-201ENSMUST00000225812 766 ntBASIC13.29□□□□□ -0.28
Tpm1P58771 Mrps17-201ENSMUST00000042191 832 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Tpm1P58771 Phka2-203ENSMUST00000112377 3947 ntAPPRIS P3 TSL 1 (best) BASIC13.29□□□□□ -0.28
Tpm1P58771 Gm10548-201ENSMUST00000097631 2629 ntBASIC13.29□□□□□ -0.28
Tpm1P58771 H2-T22-203ENSMUST00000080015 1761 ntAPPRIS P3 TSL 1 (best) BASIC13.29□□□□□ -0.28
Tpm1P58771 Gm9466-201ENSMUST00000218144 2246 ntBASIC13.29□□□□□ -0.28
Tpm1P58771 4931428F04Rik-202ENSMUST00000171788 3552 ntAPPRIS P1 TSL 5 BASIC13.29□□□□□ -0.28
Tpm1P58771 Zfyve26-203ENSMUST00000218377 2726 ntTSL 5 BASIC13.29□□□□□ -0.28
Tpm1P58771 Rasgrp4-205ENSMUST00000159975 2296 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Tpm1P58771 Syt11-203ENSMUST00000107505 5020 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Tpm1P58771 Nap1l1-203ENSMUST00000217908 1350 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Tpm1P58771 Trpv4-201ENSMUST00000071968 3228 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Tpm1P58771 Ift46-201ENSMUST00000002099 4169 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Tpm1P58771 Myocd-203ENSMUST00000108695 5114 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Tpm1P58771 Gm8522-201ENSMUST00000118416 1929 ntBASIC13.29□□□□□ -0.28
Tpm1P58771 Papln-202ENSMUST00000121733 4373 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Tpm1P58771 Pdgfrb-201ENSMUST00000025522 5407 ntAPPRIS P2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Tpm1P58771 Tgm2-201ENSMUST00000103122 3596 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Tpm1P58771 Srgap3-202ENSMUST00000088373 8887 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Tpm1P58771 Htr1b-202ENSMUST00000183482 4724 ntAPPRIS P1 TSL 3 BASIC13.28□□□□□ -0.28
Tpm1P58771 Tnxb-201ENSMUST00000087399 12209 ntAPPRIS P1 TSL 5 BASIC13.28□□□□□ -0.28
Tpm1P58771 Rassf4-201ENSMUST00000035842 6460 ntAPPRIS P2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Tpm1P58771 Olfr541-203ENSMUST00000210357 1642 ntAPPRIS P1 TSL 2 BASIC13.28□□□□□ -0.28
Tpm1P58771 Plcd4-204ENSMUST00000113747 2720 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Tpm1P58771 Calm1-201ENSMUST00000001204 3987 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Tpm1P58771 Taz-204ENSMUST00000124200 1742 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Tpm1P58771 Zfp251-201ENSMUST00000080406 3497 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Tpm1P58771 Stau2-214ENSMUST00000162007 2964 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Tpm1P58771 Olfr177-202ENSMUST00000217377 2401 ntAPPRIS P1 TSL 5 BASIC13.28□□□□□ -0.28
Tpm1P58771 Pole3-201ENSMUST00000030091 1805 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Tpm1P58771 Camp-201ENSMUST00000112022 758 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Tpm1P58771 Cd209g-201ENSMUST00000130372 1169 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Tpm1P58771 Fgfr3-ps-201ENSMUST00000195511 1137 ntBASIC13.28□□□□□ -0.28
Tpm1P58771 Gm42442-201ENSMUST00000197951 1133 ntBASIC13.28□□□□□ -0.28
Tpm1P58771 4930589O11Rik-201ENSMUST00000200768 920 ntBASIC13.28□□□□□ -0.28
Tpm1P58771 Gm42906-201ENSMUST00000202365 408 ntAPPRIS P1 TSL 5 BASIC13.28□□□□□ -0.28
Tpm1P58771 Gm7067-201ENSMUST00000207698 1249 ntBASIC13.28□□□□□ -0.28
Tpm1P58771 Chd3os-203ENSMUST00000218008 1026 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Tpm1P58771 Lsm7-208ENSMUST00000220225 1129 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Tpm1P58771 Stard3nl-209ENSMUST00000221380 1268 ntTSL 5 BASIC13.28□□□□□ -0.28
Tpm1P58771 Ier3-201ENSMUST00000003635 1131 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Tpm1P58771 Rhbdl2-201ENSMUST00000053202 1217 ntAPPRIS P1 TSL 5 BASIC13.28□□□□□ -0.28
Tpm1P58771 Kifc5b-201ENSMUST00000078961 2627 ntAPPRIS P1 TSL 5 BASIC13.28□□□□□ -0.28
Tpm1P58771 Eng-201ENSMUST00000009705 3422 ntAPPRIS P3 TSL 1 (best) BASIC13.28□□□□□ -0.28
Tpm1P58771 Mybpc3-202ENSMUST00000137942 4134 ntAPPRIS ALT2 TSL 5 BASIC13.28□□□□□ -0.28
Tpm1P58771 Foxp1-221ENSMUST00000176632 2336 ntAPPRIS ALT2 TSL 5 BASIC13.28□□□□□ -0.28
Tpm1P58771 Foxp1-222ENSMUST00000176850 2339 ntAPPRIS ALT1 TSL 5 BASIC13.28□□□□□ -0.28
Tpm1P58771 Anapc4-201ENSMUST00000031072 3854 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Tpm1P58771 Gm38273-201ENSMUST00000194987 2382 ntBASIC13.28□□□□□ -0.28
Tpm1P58771 Hnrnph2-203ENSMUST00000074950 2426 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Tpm1P58771 Pacsin1-201ENSMUST00000045896 4190 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Tpm1P58771 CT010498.2-201ENSMUST00000225690 1659 ntAPPRIS P1 BASIC13.28□□□□□ -0.28
Tpm1P58771 Parp11-202ENSMUST00000112191 3414 ntTSL 1 (best) BASIC13.27□□□□□ -0.28
Tpm1P58771 Pax7-202ENSMUST00000174681 1725 ntAPPRIS ALT1 TSL 5 BASIC13.27□□□□□ -0.28
Tpm1P58771 Ms4a15-201ENSMUST00000087923 1713 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Tpm1P58771 Slc2a4-203ENSMUST00000141837 1776 ntTSL 1 (best) BASIC13.27□□□□□ -0.28
Tpm1P58771 Pdlim5-206ENSMUST00000195975 1845 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.28
Tpm1P58771 Lhx9-205ENSMUST00000112030 4633 ntTSL 5 BASIC13.27□□□□□ -0.28
Tpm1P58771 Th-202ENSMUST00000105929 1950 ntTSL 1 (best) BASIC13.27□□□□□ -0.28
Tpm1P58771 Inpp4a-211ENSMUST00000168546 2964 ntTSL 5 BASIC13.27□□□□□ -0.28
Tpm1P58771 Acsl1-202ENSMUST00000110371 2100 ntTSL 5 BASIC13.27□□□□□ -0.28
Tpm1P58771 Tef-202ENSMUST00000109553 4401 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Tpm1P58771 Fam227a-204ENSMUST00000187519 2283 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Tpm1P58771 Vcan-202ENSMUST00000109544 5702 ntTSL 5 BASIC13.27□□□□□ -0.28
Tpm1P58771 Nedd9-202ENSMUST00000163623 4626 ntAPPRIS P3 TSL 1 (best) BASIC13.27□□□□□ -0.28
Tpm1P58771 Tenm2-201ENSMUST00000057207 8298 ntAPPRIS ALT1 TSL 5 BASIC13.27□□□□□ -0.29
Tpm1P58771 Odf2-201ENSMUST00000028128 2376 ntAPPRIS P3 TSL 1 (best) BASIC13.27□□□□□ -0.29
Tpm1P58771 Pias2-203ENSMUST00000168882 4984 ntAPPRIS P4 TSL 1 (best) BASIC13.27□□□□□ -0.29
Tpm1P58771 Chek1-202ENSMUST00000172702 3797 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Tpm1P58771 Lcn5-202ENSMUST00000100312 660 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.29
Tpm1P58771 Ppih-203ENSMUST00000106318 800 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Tpm1P58771 Litaf-202ENSMUST00000117360 763 ntAPPRIS P1 TSL 3 BASIC13.27□□□□□ -0.29
Tpm1P58771 Gm15806-201ENSMUST00000120696 955 ntBASIC13.27□□□□□ -0.29
Tpm1P58771 Gm11261-203ENSMUST00000132470 838 ntTSL 5 BASIC13.27□□□□□ -0.29
Tpm1P58771 Gm29649-201ENSMUST00000185649 419 ntBASIC13.27□□□□□ -0.29
Tpm1P58771 Gtpbp10-211ENSMUST00000198799 648 ntBASIC13.27□□□□□ -0.29
Tpm1P58771 Slc10a7-204ENSMUST00000209992 939 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Tpm1P58771 CT025535.1-201ENSMUST00000227172 491 ntBASIC13.27□□□□□ -0.29
Tpm1P58771 AC158982.1-201ENSMUST00000228377 901 ntBASIC13.27□□□□□ -0.29
Tpm1P58771 Rps15-201ENSMUST00000062674 572 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Tpm1P58771 Tcf25-202ENSMUST00000108840 2582 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.29
Tpm1P58771 Syt8-201ENSMUST00000097939 1300 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.29
Tpm1P58771 Cdh20-201ENSMUST00000062528 4012 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Tpm1P58771 Gm43860-201ENSMUST00000201742 2705 ntBASIC13.27□□□□□ -0.29
Tpm1P58771 Gm45187-201ENSMUST00000207697 2760 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Tpm1P58771 Gm37931-201ENSMUST00000194686 2866 ntBASIC13.27□□□□□ -0.29
Tpm1P58771 Frmd4a-216ENSMUST00000176828 4355 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Tpm1P58771 Enox1-203ENSMUST00000227662 3064 ntAPPRIS ALT2 BASIC13.27□□□□□ -0.29
Tpm1P58771 Epha5-205ENSMUST00000113403 4675 ntAPPRIS P5 TSL 5 BASIC13.27□□□□□ -0.29
Retrieved 100 of 76,532 protein–RNA pairs in 56.7 ms