Protein–RNA interactions for Protein: P55096

Abcd3, ATP-binding cassette sub-family D member 3, mousemouse

Predictions only

Length 659 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Abcd3P55096 Gabbr1-203ENSMUST00000172792 4036 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
Abcd3P55096 Sspn-201ENSMUST00000032383 4431 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Abcd3P55096 Col6a2-201ENSMUST00000001181 3949 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Abcd3P55096 Ncoa3-202ENSMUST00000109252 5757 ntAPPRIS ALT2 TSL 5 BASIC10.68□□□□□ -0.7
Abcd3P55096 F10-201ENSMUST00000033821 1903 ntAPPRIS ALT2 TSL 1 (best) BASIC10.68□□□□□ -0.7
Abcd3P55096 Ctsd-201ENSMUST00000066401 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC10.68□□□□□ -0.7
Abcd3P55096 Cald1-205ENSMUST00000115027 4777 ntTSL 5 BASIC10.68□□□□□ -0.7
Abcd3P55096 AC154639.1-201ENSMUST00000224393 2849 ntBASIC10.68□□□□□ -0.7
Abcd3P55096 Ntng2-202ENSMUST00000071201 1881 ntTSL 5 BASIC10.68□□□□□ -0.7
Abcd3P55096 Morf4l2-204ENSMUST00000113097 1825 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Abcd3P55096 Wif1-201ENSMUST00000020439 2294 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Abcd3P55096 Cdk13-207ENSMUST00000223490 12548 ntAPPRIS ALT2 TSL 1 (best) BASIC10.68□□□□□ -0.7
Abcd3P55096 Zfp426-202ENSMUST00000115562 3557 ntAPPRIS P3 TSL 1 (best) BASIC10.68□□□□□ -0.7
Abcd3P55096 Plcd1-201ENSMUST00000010804 2657 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Abcd3P55096 Dlc1-201ENSMUST00000033923 6159 ntAPPRIS P3 TSL 1 (best) BASIC10.68□□□□□ -0.7
Abcd3P55096 Acly-201ENSMUST00000007131 4393 ntAPPRIS P3 TSL 1 (best) BASIC10.68□□□□□ -0.7
Abcd3P55096 Nrap-203ENSMUST00000095947 5214 ntTSL 5 BASIC10.68□□□□□ -0.7
Abcd3P55096 Armc2-208ENSMUST00000162405 1135 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
Abcd3P55096 Gm11523-203ENSMUST00000184482 802 ntTSL 3 BASIC10.68□□□□□ -0.7
Abcd3P55096 Gm32999-201ENSMUST00000192693 562 ntBASIC10.68□□□□□ -0.7
Abcd3P55096 Gm38341-201ENSMUST00000195357 515 ntBASIC10.68□□□□□ -0.7
Abcd3P55096 Nkg7-203ENSMUST00000206741 686 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
Abcd3P55096 Ms4a8a-201ENSMUST00000025636 1081 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Abcd3P55096 Calca-201ENSMUST00000032906 994 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Abcd3P55096 Pxt1-201ENSMUST00000051526 710 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Abcd3P55096 Mtmr4-201ENSMUST00000092802 5525 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
Abcd3P55096 Mtr-201ENSMUST00000099856 8294 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Abcd3P55096 Rab10os-203ENSMUST00000178074 4006 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
Abcd3P55096 Tom1l2-202ENSMUST00000093046 4849 ntTSL 5 BASIC10.68□□□□□ -0.7
Abcd3P55096 Gm5847-201ENSMUST00000178959 1595 ntBASIC10.68□□□□□ -0.7
Abcd3P55096 Gemin4-201ENSMUST00000102500 3540 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Abcd3P55096 Grpel1-201ENSMUST00000031099 3528 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Abcd3P55096 Trim46-202ENSMUST00000090924 2721 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
Abcd3P55096 Pdzrn4-202ENSMUST00000169942 3851 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Abcd3P55096 Plscr1-201ENSMUST00000093801 2302 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Abcd3P55096 Zfp512-208ENSMUST00000202244 3045 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
Abcd3P55096 Lmbr1-202ENSMUST00000179191 4836 ntTSL 5 BASIC10.68□□□□□ -0.7
Abcd3P55096 Kifap3-202ENSMUST00000077642 4012 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
Abcd3P55096 Arap1-202ENSMUST00000084896 4926 ntAPPRIS ALT2 TSL 1 (best) BASIC10.67□□□□□ -0.7
Abcd3P55096 Pcif1-201ENSMUST00000041643 5772 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Abcd3P55096 Myo5b-203ENSMUST00000121875 6065 ntAPPRIS ALT2 TSL 5 BASIC10.67□□□□□ -0.7
Abcd3P55096 Fut8-201ENSMUST00000062804 3358 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Abcd3P55096 Il1rap-206ENSMUST00000174202 2306 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
Abcd3P55096 Tectb-202ENSMUST00000120936 1349 ntTSL 5 BASIC10.67□□□□□ -0.7
Abcd3P55096 Fam170a-201ENSMUST00000039121 1342 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Abcd3P55096 Vmac-202ENSMUST00000164907 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC10.67□□□□□ -0.7
Abcd3P55096 Parvg-201ENSMUST00000023074 2619 ntAPPRIS P3 TSL 1 (best) BASIC10.67□□□□□ -0.7
Abcd3P55096 2900026A02Rik-203ENSMUST00000212276 5864 ntAPPRIS ALT2 TSL 5 BASIC10.67□□□□□ -0.7
Abcd3P55096 Plrg1-202ENSMUST00000122128 1608 ntTSL 5 BASIC10.67□□□□□ -0.7
Abcd3P55096 Slc22a4-201ENSMUST00000020586 2263 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Abcd3P55096 Vsx2-202ENSMUST00000169934 3249 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
Abcd3P55096 Cela2a-201ENSMUST00000102481 1070 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Abcd3P55096 Hsd17b10-202ENSMUST00000112617 992 ntTSL 5 BASIC10.67□□□□□ -0.7
Abcd3P55096 Gm13205-201ENSMUST00000123548 562 ntTSL 3 BASIC10.67□□□□□ -0.7
Abcd3P55096 Nrg4-204ENSMUST00000130158 1000 ntAPPRIS P1 TSL 5 BASIC10.67□□□□□ -0.7
Abcd3P55096 Cdk3-ps-202ENSMUST00000174177 915 ntAPPRIS P1 TSL 5 BASIC10.67□□□□□ -0.7
Abcd3P55096 Hspb9-201ENSMUST00000017976 652 ntAPPRIS ALT2 BASIC10.67□□□□□ -0.7
Abcd3P55096 Gm6114-201ENSMUST00000182472 968 ntBASIC10.67□□□□□ -0.7
Abcd3P55096 Gm43050-201ENSMUST00000201062 338 ntTSL 2 BASIC10.67□□□□□ -0.7
Abcd3P55096 Hspb2-202ENSMUST00000217159 552 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
Abcd3P55096 AC153845.2-201ENSMUST00000217535 673 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
Abcd3P55096 Hsd17b10-201ENSMUST00000026289 962 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Abcd3P55096 9430041J12Rik-201ENSMUST00000050989 534 ntBASIC10.67□□□□□ -0.7
Abcd3P55096 Mfsd4b5-205ENSMUST00000170579 1554 ntAPPRIS P1 TSL 2 BASIC10.67□□□□□ -0.7
Abcd3P55096 Cyp4b1-201ENSMUST00000102707 1892 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Abcd3P55096 Ecd-201ENSMUST00000022344 3132 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Abcd3P55096 Cfap52-201ENSMUST00000021287 2199 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Abcd3P55096 Itgal-202ENSMUST00000117762 5222 ntAPPRIS ALT2 TSL 1 (best) BASIC10.67□□□□□ -0.7
Abcd3P55096 Strada-202ENSMUST00000103072 1517 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
Abcd3P55096 Ikzf1-201ENSMUST00000018798 1542 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
Abcd3P55096 Rab8a-201ENSMUST00000003121 4550 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Abcd3P55096 Trpc7-207ENSMUST00000173817 2406 ntTSL 5 BASIC10.67□□□□□ -0.7
Abcd3P55096 Arfgap1-201ENSMUST00000029092 2714 ntAPPRIS P3 TSL 1 (best) BASIC10.67□□□□□ -0.7
Abcd3P55096 Pros1-201ENSMUST00000023629 3303 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Abcd3P55096 Pcsk7-201ENSMUST00000039059 3876 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Abcd3P55096 Ap1g2-201ENSMUST00000036041 2673 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Abcd3P55096 Rnf6-201ENSMUST00000067837 2388 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Abcd3P55096 Frmd4a-202ENSMUST00000091497 6208 ntAPPRIS P3 TSL 1 (best) BASIC10.67□□□□□ -0.7
Abcd3P55096 H2-T10-201ENSMUST00000166442 1481 ntAPPRIS P1 TSL 5 BASIC10.67□□□□□ -0.7
Abcd3P55096 Lrmp-201ENSMUST00000032396 2319 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Abcd3P55096 Mog-201ENSMUST00000102665 1704 ntAPPRIS P2 TSL 1 (best) BASIC10.67□□□□□ -0.7
Abcd3P55096 Ldb3-204ENSMUST00000064098 2299 ntAPPRIS ALT2 TSL 1 (best) BASIC10.67□□□□□ -0.7
Abcd3P55096 Kctd10-202ENSMUST00000102581 3103 ntAPPRIS P3 TSL 1 (best) BASIC10.67□□□□□ -0.7
Abcd3P55096 Kcnj11-205ENSMUST00000211674 3142 ntAPPRIS P1 BASIC10.67□□□□□ -0.7
Abcd3P55096 Kank4-201ENSMUST00000102790 4795 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Abcd3P55096 Ddx17-201ENSMUST00000054014 4761 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Abcd3P55096 Brd3-210ENSMUST00000164296 2791 ntAPPRIS P3 TSL 5 BASIC10.66□□□□□ -0.7
Abcd3P55096 Flywch1-201ENSMUST00000045517 2798 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Abcd3P55096 Mtap-201ENSMUST00000058030 2797 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Abcd3P55096 Akap10-202ENSMUST00000102650 3874 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Abcd3P55096 Grm5-201ENSMUST00000107263 3516 ntAPPRIS P3 TSL 1 (best) BASIC10.66□□□□□ -0.7
Abcd3P55096 Tmem136-201ENSMUST00000061833 3503 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Abcd3P55096 Axin2-201ENSMUST00000052915 4260 ntAPPRIS P2 TSL 1 (best) BASIC10.66□□□□□ -0.7
Abcd3P55096 Tor1aip1-202ENSMUST00000097527 4234 ntAPPRIS ALT2 TSL 1 (best) BASIC10.66□□□□□ -0.7
Abcd3P55096 Lrp8-203ENSMUST00000106732 2648 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
Abcd3P55096 Tmem8b-201ENSMUST00000107864 4726 ntAPPRIS P1 TSL 5 BASIC10.66□□□□□ -0.7
Abcd3P55096 Fam71f1-201ENSMUST00000090487 1584 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
Abcd3P55096 Fam177a-201ENSMUST00000177768 3922 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Abcd3P55096 Mapk8ip3-202ENSMUST00000115228 5424 ntAPPRIS ALT2 TSL 1 (best) BASIC10.66□□□□□ -0.7
Abcd3P55096 Ctif-201ENSMUST00000165559 6173 ntAPPRIS P1 TSL 5 BASIC10.66□□□□□ -0.7
Retrieved 100 of 76,532 protein–RNA pairs in 28.7 ms