Protein–RNA interactions for Protein: P55066

Ncan, Neurocan core protein, mousemouse

Predictions only

Length 1,268 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NcanP55066 Sstr2-203ENSMUST00000146390 2143 ntAPPRIS P1 TSL 5 BASIC12.53□□□□□ -0.4
NcanP55066 Ptprs-202ENSMUST00000086828 5608 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
NcanP55066 Gm26818-201ENSMUST00000181367 1360 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
NcanP55066 Pip5k1c-210ENSMUST00000163075 4208 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
NcanP55066 Ercc5-201ENSMUST00000027214 3907 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
NcanP55066 Ddi2-202ENSMUST00000177592 3539 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
NcanP55066 4930558J22Rik-201ENSMUST00000139822 1480 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
NcanP55066 Gm26732-201ENSMUST00000181807 2771 ntTSL 5 BASIC12.52□□□□□ -0.4
NcanP55066 Ccdc126-202ENSMUST00000114491 2372 ntTSL 5 BASIC12.52□□□□□ -0.4
NcanP55066 Trpm1-221ENSMUST00000206706 2350 ntTSL 1 (best) BASIC12.52□□□□□ -0.4
NcanP55066 Cln3-201ENSMUST00000032962 2386 ntAPPRIS P2 TSL 1 (best) BASIC12.52□□□□□ -0.4
NcanP55066 Irf8-201ENSMUST00000047737 2847 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
NcanP55066 Gm45199-201ENSMUST00000207640 1507 ntBASIC12.52□□□□□ -0.4
NcanP55066 Chmp5-201ENSMUST00000030128 1519 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
NcanP55066 Gm10750-201ENSMUST00000099266 1506 ntAPPRIS P1 BASIC12.52□□□□□ -0.4
NcanP55066 Zfp954-201ENSMUST00000056246 2042 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
NcanP55066 Gm8155-201ENSMUST00000216363 1612 ntBASIC12.52□□□□□ -0.4
NcanP55066 Hells-201ENSMUST00000025965 5868 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
NcanP55066 Ppp1r9b-202ENSMUST00000107748 3095 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.4
NcanP55066 Asap1-218ENSMUST00000177374 4582 ntAPPRIS P3 TSL 1 (best) BASIC12.52□□□□□ -0.4
NcanP55066 Prdm5-202ENSMUST00000031976 2155 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
NcanP55066 Ttc7-201ENSMUST00000041110 4614 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
NcanP55066 Tmem30a-201ENSMUST00000034878 3658 ntAPPRIS P2 TSL 1 (best) BASIC12.52□□□□□ -0.41
NcanP55066 Gm31138-201ENSMUST00000212296 1705 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
NcanP55066 Ubxn10-201ENSMUST00000105809 2757 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
NcanP55066 Gm11554-201ENSMUST00000105056 890 ntAPPRIS P1 BASIC12.52□□□□□ -0.41
NcanP55066 Krt40-202ENSMUST00000107443 1080 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
NcanP55066 Mrps36-203ENSMUST00000109333 701 ntAPPRIS P3 TSL 1 (best) BASIC12.52□□□□□ -0.41
NcanP55066 Gm9095-201ENSMUST00000117607 881 ntBASIC12.52□□□□□ -0.41
NcanP55066 Gm15707-201ENSMUST00000118804 996 ntBASIC12.52□□□□□ -0.41
NcanP55066 Gm9097-201ENSMUST00000120514 880 ntBASIC12.52□□□□□ -0.41
NcanP55066 Gm13281-201ENSMUST00000120871 567 ntBASIC12.52□□□□□ -0.41
NcanP55066 9430093N23Rik-201ENSMUST00000152494 515 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
NcanP55066 Tex33-203ENSMUST00000169575 942 ntAPPRIS ALT2 TSL 5 BASIC12.52□□□□□ -0.41
NcanP55066 Gm17597-201ENSMUST00000181220 1115 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
NcanP55066 Gm37452-201ENSMUST00000194416 1160 ntBASIC12.52□□□□□ -0.41
NcanP55066 Ccdc114-205ENSMUST00000211367 1078 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.41
NcanP55066 Nkain2-205ENSMUST00000219125 1166 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
NcanP55066 Timm9-210ENSMUST00000221892 734 ntTSL 5 BASIC12.52□□□□□ -0.41
NcanP55066 AC118639.2-201ENSMUST00000226289 223 ntBASIC12.52□□□□□ -0.41
NcanP55066 Mustn1-201ENSMUST00000040715 1236 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
NcanP55066 Acyp1-201ENSMUST00000008966 648 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
NcanP55066 Slc40a1-201ENSMUST00000027137 3370 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
NcanP55066 Zc3hc1-201ENSMUST00000080812 1824 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
NcanP55066 Wnk1-223ENSMUST00000177761 11303 ntAPPRIS ALT2 TSL 5 BASIC12.52□□□□□ -0.41
NcanP55066 9430015G10Rik-202ENSMUST00000105576 1329 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
NcanP55066 Pdgfra-205ENSMUST00000201711 4088 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
NcanP55066 Fgf12-201ENSMUST00000100024 3065 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
NcanP55066 Cyp8b1-201ENSMUST00000062474 1950 ntAPPRIS P1 BASIC12.52□□□□□ -0.41
NcanP55066 Zbtb2-202ENSMUST00000100078 3226 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
NcanP55066 Gm7701-201ENSMUST00000163185 1479 ntBASIC12.52□□□□□ -0.41
NcanP55066 Mterf3-201ENSMUST00000021991 1479 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
NcanP55066 Smok4a-201ENSMUST00000074512 1455 ntBASIC12.52□□□□□ -0.41
NcanP55066 Tub-202ENSMUST00000119474 2097 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
NcanP55066 Epha2-201ENSMUST00000006614 3913 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
NcanP55066 Arid4b-203ENSMUST00000110534 5864 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
NcanP55066 Hspa12b-201ENSMUST00000099349 3413 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
NcanP55066 Chrdl1-203ENSMUST00000112878 4050 ntAPPRIS ALT2 TSL 5 BASIC12.52□□□□□ -0.41
NcanP55066 Mocos-201ENSMUST00000068006 2884 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
NcanP55066 Qrfpr-203ENSMUST00000197447 1690 ntTSL 5 BASIC12.51□□□□□ -0.41
NcanP55066 Slc38a6-206ENSMUST00000140523 3032 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
NcanP55066 Slc4a5-201ENSMUST00000039212 5123 ntAPPRIS P2 TSL 5 BASIC12.51□□□□□ -0.41
NcanP55066 4732471J01Rik-204ENSMUST00000206436 2430 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
NcanP55066 Zfp1-201ENSMUST00000077791 1811 ntAPPRIS P3 TSL 1 (best) BASIC12.51□□□□□ -0.41
NcanP55066 Plk4-203ENSMUST00000203295 3363 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
NcanP55066 Mir17hg-201ENSMUST00000134140 3536 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
NcanP55066 Rnf217-201ENSMUST00000081989 11013 ntAPPRIS P1 TSL 5 BASIC12.51□□□□□ -0.41
NcanP55066 Trav13d-4-201ENSMUST00000103607 264 ntAPPRIS P1 BASIC12.51□□□□□ -0.41
NcanP55066 Gm23132-201ENSMUST00000104254 132 ntBASIC12.51□□□□□ -0.41
NcanP55066 Trmt10b-202ENSMUST00000107800 983 ntAPPRIS ALT2 TSL 5 BASIC12.51□□□□□ -0.41
NcanP55066 Necab1-202ENSMUST00000108273 2135 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
NcanP55066 Camk2a-205ENSMUST00000115297 499 ntTSL 2 BASIC12.51□□□□□ -0.41
NcanP55066 Anxa8-202ENSMUST00000120077 1208 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
NcanP55066 Gm14052-201ENSMUST00000121434 1031 ntBASIC12.51□□□□□ -0.41
NcanP55066 C130080G10Rik-204ENSMUST00000155185 954 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
NcanP55066 Gm10807-201ENSMUST00000177134 795 ntBASIC12.51□□□□□ -0.41
NcanP55066 Calm5-202ENSMUST00000184271 423 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
NcanP55066 Trav13-4-dv7-202ENSMUST00000184905 264 ntAPPRIS P1 BASIC12.51□□□□□ -0.41
NcanP55066 Gm4034-201ENSMUST00000187674 480 ntBASIC12.51□□□□□ -0.41
NcanP55066 Gm2448-201ENSMUST00000207080 559 ntBASIC12.51□□□□□ -0.41
NcanP55066 C230062I16Rik-203ENSMUST00000208015 648 ntTSL 3 BASIC12.51□□□□□ -0.41
NcanP55066 Gm7192-201ENSMUST00000210793 1137 ntBASIC12.51□□□□□ -0.41
NcanP55066 Gm9487-201ENSMUST00000216600 472 ntBASIC12.51□□□□□ -0.41
NcanP55066 1700008C04Rik-201ENSMUST00000218606 797 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
NcanP55066 AC162932.1-201ENSMUST00000219209 872 ntBASIC12.51□□□□□ -0.41
NcanP55066 AC154305.2-201ENSMUST00000225813 901 ntBASIC12.51□□□□□ -0.41
NcanP55066 Cadm2-202ENSMUST00000120594 3248 ntAPPRIS ALT1 TSL 5 BASIC12.51□□□□□ -0.41
NcanP55066 Taf6-202ENSMUST00000110936 2308 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
NcanP55066 Abcg5-201ENSMUST00000066175 2351 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
NcanP55066 Cacna2d2-208ENSMUST00000170737 5332 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
NcanP55066 Prrt3-202ENSMUST00000204134 3424 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
NcanP55066 Bcl6-201ENSMUST00000023151 3525 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
NcanP55066 Zfp385b-203ENSMUST00000111830 2642 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
NcanP55066 Kcnf1-201ENSMUST00000170580 4789 ntAPPRIS P1 BASIC12.51□□□□□ -0.41
NcanP55066 AC174797.1-201ENSMUST00000224339 1649 ntBASIC12.51□□□□□ -0.41
NcanP55066 Rad9b-201ENSMUST00000049009 1631 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
NcanP55066 Gabrr2-202ENSMUST00000108162 1933 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
NcanP55066 Gm37600-201ENSMUST00000193764 3292 ntBASIC12.5□□□□□ -0.41
NcanP55066 Yod1-201ENSMUST00000049813 6128 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
NcanP55066 Gm14243-201ENSMUST00000131401 2172 ntTSL 2 BASIC12.5□□□□□ -0.41
Retrieved 100 of 76,532 protein–RNA pairs in 35 ms