Protein–RNA interactions for Protein: P50220

Nkx2-1, Homeobox protein Nkx-2.1, mousemouse

Predictions only

Length 372 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx2-1P50220 Gm20412-201ENSMUST00000173249 633 ntTSL 5 BASIC9.87□□□□□ -0.83
Nkx2-1P50220 Gm8018-201ENSMUST00000173536 789 ntBASIC9.87□□□□□ -0.83
Nkx2-1P50220 Gm5741-201ENSMUST00000177563 328 ntAPPRIS P1 TSL 1 (best) BASIC9.87□□□□□ -0.83
Nkx2-1P50220 Gm27839-201ENSMUST00000184242 106 ntBASIC9.87□□□□□ -0.83
Nkx2-1P50220 Gm29649-201ENSMUST00000185649 419 ntBASIC9.87□□□□□ -0.83
Nkx2-1P50220 Myl10-203ENSMUST00000196436 598 ntTSL 3 BASIC9.87□□□□□ -0.83
Nkx2-1P50220 Gm42442-201ENSMUST00000197951 1133 ntBASIC9.87□□□□□ -0.83
Nkx2-1P50220 Mymx-204ENSMUST00000208801 437 ntAPPRIS ALT2 TSL 2 BASIC9.87□□□□□ -0.83
Nkx2-1P50220 Gm20219-201ENSMUST00000209718 1269 ntAPPRIS P1 TSL 5 BASIC9.87□□□□□ -0.83
Nkx2-1P50220 Gm5035-201ENSMUST00000215581 927 ntBASIC9.87□□□□□ -0.83
Nkx2-1P50220 AC155237.1-201ENSMUST00000226196 1279 ntBASIC9.87□□□□□ -0.83
Nkx2-1P50220 AC126253.1-202ENSMUST00000226732 835 ntBASIC9.87□□□□□ -0.83
Nkx2-1P50220 Pfdn1-201ENSMUST00000025204 1077 ntAPPRIS P1 TSL 1 (best) BASIC9.87□□□□□ -0.83
Nkx2-1P50220 Il25-201ENSMUST00000037863 1064 ntAPPRIS P1 TSL 1 (best) BASIC9.87□□□□□ -0.83
Nkx2-1P50220 Nkiras2-202ENSMUST00000051947 831 ntAPPRIS P1 TSL 1 (best) BASIC9.87□□□□□ -0.83
Nkx2-1P50220 Gm8420-201ENSMUST00000097103 598 ntBASIC9.87□□□□□ -0.83
Nkx2-1P50220 Myh13-203ENSMUST00000180845 5991 ntAPPRIS P1 TSL 5 BASIC9.87□□□□□ -0.83
Nkx2-1P50220 Clcn4-201ENSMUST00000000619 4607 ntAPPRIS P3 TSL 1 (best) BASIC9.87□□□□□ -0.83
Nkx2-1P50220 Trpc7-207ENSMUST00000173817 2406 ntTSL 5 BASIC9.87□□□□□ -0.83
Nkx2-1P50220 Vill-202ENSMUST00000074734 2440 ntTSL 1 (best) BASIC9.87□□□□□ -0.83
Nkx2-1P50220 Crispld2-202ENSMUST00000108972 2928 ntAPPRIS P3 TSL 1 (best) BASIC9.87□□□□□ -0.83
Nkx2-1P50220 Nuak2-201ENSMUST00000072177 2936 ntAPPRIS ALT2 TSL 1 (best) BASIC9.87□□□□□ -0.83
Nkx2-1P50220 9030624J02Rik-202ENSMUST00000059390 5097 ntTSL 1 (best) BASIC9.87□□□□□ -0.83
Nkx2-1P50220 Krt7-201ENSMUST00000068904 4094 ntAPPRIS P1 TSL 1 (best) BASIC9.87□□□□□ -0.83
Nkx2-1P50220 Mmp25-201ENSMUST00000024696 3373 ntAPPRIS P1 TSL 1 (best) BASIC9.87□□□□□ -0.83
Nkx2-1P50220 Prpf40b-208ENSMUST00000136980 3047 ntAPPRIS ALT2 TSL 5 BASIC9.87□□□□□ -0.83
Nkx2-1P50220 Btnl1-201ENSMUST00000080254 1861 ntAPPRIS P1 TSL 5 BASIC9.87□□□□□ -0.83
Nkx2-1P50220 Psapl1-201ENSMUST00000052224 2548 ntAPPRIS P1 BASIC9.87□□□□□ -0.83
Nkx2-1P50220 Ssh1-201ENSMUST00000077689 3164 ntAPPRIS ALT2 TSL 1 (best) BASIC9.87□□□□□ -0.83
Nkx2-1P50220 Chchd3-202ENSMUST00000115091 1363 ntTSL 1 (best) BASIC9.87□□□□□ -0.83
Nkx2-1P50220 Klk1b16-201ENSMUST00000005933 1387 ntAPPRIS P1 TSL 1 (best) BASIC9.87□□□□□ -0.83
Nkx2-1P50220 Gm37827-201ENSMUST00000194486 1542 ntBASIC9.87□□□□□ -0.83
Nkx2-1P50220 Gm13857-203ENSMUST00000150561 2337 ntTSL 1 (best) BASIC9.87□□□□□ -0.83
Nkx2-1P50220 Pip5k1a-204ENSMUST00000107232 3437 ntAPPRIS ALT2 TSL 5 BASIC9.86□□□□□ -0.83
Nkx2-1P50220 Steap3-203ENSMUST00000112641 5158 ntAPPRIS P1 TSL 1 (best) BASIC9.86□□□□□ -0.83
Nkx2-1P50220 Gm5441-201ENSMUST00000186454 5181 ntTSL 1 (best) BASIC9.86□□□□□ -0.83
Nkx2-1P50220 Sfrp4-203ENSMUST00000222464 4049 ntTSL 1 (best) BASIC9.86□□□□□ -0.83
Nkx2-1P50220 Robo4-201ENSMUST00000102895 3226 ntAPPRIS P3 TSL 1 (best) BASIC9.86□□□□□ -0.83
Nkx2-1P50220 Ablim1-211ENSMUST00000111555 2562 ntAPPRIS ALT2 TSL 5 BASIC9.86□□□□□ -0.83
Nkx2-1P50220 Calm1-201ENSMUST00000001204 3987 ntTSL 1 (best) BASIC9.86□□□□□ -0.83
Nkx2-1P50220 Gm20425-201ENSMUST00000166836 3028 ntAPPRIS P1 TSL 5 BASIC9.86□□□□□ -0.83
Nkx2-1P50220 Pfkp-201ENSMUST00000021614 2679 ntAPPRIS ALT2 TSL 1 (best) BASIC9.86□□□□□ -0.83
Nkx2-1P50220 Lamb1-205ENSMUST00000169088 5557 ntAPPRIS P1 TSL 5 BASIC9.86□□□□□ -0.83
Nkx2-1P50220 Tsc2-201ENSMUST00000097373 6018 ntAPPRIS P2 TSL 1 (best) BASIC9.86□□□□□ -0.83
Nkx2-1P50220 Gm17281-201ENSMUST00000180732 3589 ntTSL 1 (best) BASIC9.86□□□□□ -0.83
Nkx2-1P50220 Gabre-201ENSMUST00000064780 4306 ntAPPRIS P1 TSL 1 (best) BASIC9.86□□□□□ -0.83
Nkx2-1P50220 Gm2606-201ENSMUST00000100754 1002 ntBASIC9.86□□□□□ -0.83
Nkx2-1P50220 Rps8-201ENSMUST00000102696 860 ntAPPRIS P1 TSL 1 (best) BASIC9.86□□□□□ -0.83
Nkx2-1P50220 Ighv1-80-201ENSMUST00000103547 351 ntAPPRIS P1 BASIC9.86□□□□□ -0.83
Nkx2-1P50220 Gm23912-201ENSMUST00000104687 87 ntBASIC9.86□□□□□ -0.83
Nkx2-1P50220 Timm10-202ENSMUST00000111631 564 ntAPPRIS P1 TSL 3 BASIC9.86□□□□□ -0.83
Nkx2-1P50220 Mospd2-203ENSMUST00000112248 2487 ntTSL 1 (best) BASIC9.86□□□□□ -0.83
Nkx2-1P50220 Wisp1-202ENSMUST00000118823 708 ntTSL 5 BASIC9.86□□□□□ -0.83
Nkx2-1P50220 Gm15172-201ENSMUST00000118945 1046 ntBASIC9.86□□□□□ -0.83
Nkx2-1P50220 Car15-201ENSMUST00000118960 1283 ntAPPRIS P1 TSL 1 (best) BASIC9.86□□□□□ -0.83
Nkx2-1P50220 Tpst1-202ENSMUST00000118993 1867 ntAPPRIS P1 TSL 1 (best) BASIC9.86□□□□□ -0.83
Nkx2-1P50220 Gm12286-201ENSMUST00000119246 1002 ntBASIC9.86□□□□□ -0.83
Nkx2-1P50220 D930015M05Rik-201ENSMUST00000126002 1190 ntTSL 1 (best) BASIC9.86□□□□□ -0.83
Nkx2-1P50220 Mthfsd-206ENSMUST00000133037 1060 ntTSL 5 BASIC9.86□□□□□ -0.83
Nkx2-1P50220 2810404F17Rik-201ENSMUST00000156615 1704 ntTSL 1 (best) BASIC9.86□□□□□ -0.83
Nkx2-1P50220 Cabp2-201ENSMUST00000159148 1030 ntAPPRIS ALT2 TSL 1 (best) BASIC9.86□□□□□ -0.83
Nkx2-1P50220 Gtf2e2-201ENSMUST00000167264 1566 ntAPPRIS P1 TSL 1 (best) BASIC9.86□□□□□ -0.83
Nkx2-1P50220 Spats2l-211ENSMUST00000169772 2311 ntAPPRIS P1 TSL 1 (best) BASIC9.86□□□□□ -0.83
Nkx2-1P50220 Gm4271-201ENSMUST00000174444 973 ntBASIC9.86□□□□□ -0.83
Nkx2-1P50220 Gm26721-201ENSMUST00000181723 992 ntTSL 1 (best) BASIC9.86□□□□□ -0.83
Nkx2-1P50220 Mhrt-201ENSMUST00000181782 828 ntTSL 2 BASIC9.86□□□□□ -0.83
Nkx2-1P50220 Zfp709-202ENSMUST00000188374 717 ntTSL 1 (best) BASIC9.86□□□□□ -0.83
Nkx2-1P50220 Gm44170-201ENSMUST00000203181 549 ntTSL 5 BASIC9.86□□□□□ -0.83
Nkx2-1P50220 Nkg7-203ENSMUST00000206741 686 ntTSL 1 (best) BASIC9.86□□□□□ -0.83
Nkx2-1P50220 4933421D24Rik-201ENSMUST00000209302 1286 ntTSL 1 (best) BASIC9.86□□□□□ -0.83
Nkx2-1P50220 Rtp4-202ENSMUST00000209422 1859 ntAPPRIS P1 TSL 5 BASIC9.86□□□□□ -0.83
Nkx2-1P50220 Gm29705-201ENSMUST00000212598 474 ntBASIC9.86□□□□□ -0.83
Nkx2-1P50220 Gm32926-201ENSMUST00000214043 681 ntTSL 3 BASIC9.86□□□□□ -0.83
Nkx2-1P50220 Degs2-201ENSMUST00000021691 1287 ntAPPRIS P1 TSL 1 (best) BASIC9.86□□□□□ -0.83
Nkx2-1P50220 Rps12-203ENSMUST00000218107 584 ntAPPRIS P1 TSL 1 (best) BASIC9.86□□□□□ -0.83
Nkx2-1P50220 AC140375.2-201ENSMUST00000225283 584 ntBASIC9.86□□□□□ -0.83
Nkx2-1P50220 AC069562.3-201ENSMUST00000225387 587 ntBASIC9.86□□□□□ -0.83
Nkx2-1P50220 Prss39-201ENSMUST00000027299 1267 ntAPPRIS P1 TSL 1 (best) BASIC9.86□□□□□ -0.83
Nkx2-1P50220 Erlin2-201ENSMUST00000033873 4838 ntAPPRIS P1 TSL 1 (best) BASIC9.86□□□□□ -0.83
Nkx2-1P50220 Epha6-201ENSMUST00000068860 3930 ntAPPRIS P1 TSL 1 (best) BASIC9.86□□□□□ -0.83
Nkx2-1P50220 Fam107b-201ENSMUST00000027965 3156 ntAPPRIS P1 TSL 1 (best) BASIC9.86□□□□□ -0.83
Nkx2-1P50220 Slx4ip-206ENSMUST00000180277 2723 ntAPPRIS P1 TSL 3 BASIC9.86□□□□□ -0.83
Nkx2-1P50220 Acat1-201ENSMUST00000034547 3405 ntAPPRIS P1 TSL 1 (best) BASIC9.86□□□□□ -0.83
Nkx2-1P50220 Myt1l-201ENSMUST00000021009 5027 ntAPPRIS ALT2 TSL 1 (best) BASIC9.86□□□□□ -0.83
Nkx2-1P50220 Gfi1b-201ENSMUST00000028156 1681 ntAPPRIS P3 TSL 1 (best) BASIC9.86□□□□□ -0.83
Nkx2-1P50220 Exosc2-201ENSMUST00000038474 1686 ntAPPRIS P1 TSL 1 (best) BASIC9.86□□□□□ -0.83
Nkx2-1P50220 Ces2d-ps-201ENSMUST00000043209 1656 ntBASIC9.86□□□□□ -0.83
Nkx2-1P50220 Slc25a51-202ENSMUST00000116341 4438 ntAPPRIS P1 TSL 1 (best) BASIC9.86□□□□□ -0.83
Nkx2-1P50220 Pla2g4a-202ENSMUST00000111926 2835 ntTSL 1 (best) BASIC9.86□□□□□ -0.83
Nkx2-1P50220 Dscaml1-201ENSMUST00000034592 6886 ntAPPRIS P1 TSL 1 (best) BASIC9.86□□□□□ -0.83
Nkx2-1P50220 Gstcd-201ENSMUST00000029651 3503 ntAPPRIS P1 TSL 1 (best) BASIC9.86□□□□□ -0.83
Nkx2-1P50220 Dcun1d3-202ENSMUST00000098080 3072 ntAPPRIS P1 TSL 1 (best) BASIC9.86□□□□□ -0.83
Nkx2-1P50220 Nrap-204ENSMUST00000166203 5079 ntAPPRIS ALT2 TSL 5 BASIC9.86□□□□□ -0.83
Nkx2-1P50220 Madd-213ENSMUST00000111376 5927 ntAPPRIS ALT2 TSL 5 BASIC9.86□□□□□ -0.83
Nkx2-1P50220 Madd-206ENSMUST00000099725 5905 ntAPPRIS ALT2 TSL 5 BASIC9.86□□□□□ -0.83
Nkx2-1P50220 Utp23-203ENSMUST00000137116 2921 ntAPPRIS P1 TSL 1 (best) BASIC9.86□□□□□ -0.83
Nkx2-1P50220 Sept11-201ENSMUST00000074733 5028 ntAPPRIS P3 TSL 1 (best) BASIC9.85□□□□□ -0.83
Nkx2-1P50220 Rspo2-201ENSMUST00000063492 3338 ntAPPRIS P1 TSL 1 (best) BASIC9.85□□□□□ -0.83
Nkx2-1P50220 Tenm2-208ENSMUST00000163524 8668 ntAPPRIS P2 TSL 5 BASIC9.85□□□□□ -0.83
Nkx2-1P50220 Atp6v1a-201ENSMUST00000063661 3896 ntAPPRIS P1 TSL 1 (best) BASIC9.85□□□□□ -0.83
Retrieved 100 of 76,532 protein–RNA pairs in 30.5 ms