Protein–RNA interactions for Protein: P48432

Sox2, Transcription factor SOX-2, mousemouse

Predictions only

Length 319 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox2P48432 Ftsj1-201ENSMUST00000033513 3425 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.63
Sox2P48432 Slc7a3-201ENSMUST00000073927 2232 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.63
Sox2P48432 Palm-204ENSMUST00000218631 2725 ntTSL 2 BASIC11.15□□□□□ -0.63
Sox2P48432 Pnpla6-212ENSMUST00000208002 4444 ntTSL 1 (best) BASIC11.15□□□□□ -0.63
Sox2P48432 Spata13-207ENSMUST00000160973 7467 ntAPPRIS P3 TSL 1 (best) BASIC11.14□□□□□ -0.63
Sox2P48432 Gdap2-202ENSMUST00000106997 2014 ntTSL 2 BASIC11.14□□□□□ -0.63
Sox2P48432 Pif1-203ENSMUST00000134538 3395 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Sox2P48432 Abi2-207ENSMUST00000188618 4723 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
Sox2P48432 Nynrin-201ENSMUST00000100529 6990 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Sox2P48432 Rsad1-201ENSMUST00000040487 4143 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Sox2P48432 Grm1-201ENSMUST00000044306 6930 ntAPPRIS P3 TSL 1 (best) BASIC11.14□□□□□ -0.63
Sox2P48432 Tnfaip3-201ENSMUST00000019997 4422 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Sox2P48432 Tcf4-240ENSMUST00000201781 2779 ntTSL 5 BASIC11.14□□□□□ -0.63
Sox2P48432 Ndel1-202ENSMUST00000101017 1646 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
Sox2P48432 Immt-202ENSMUST00000101301 2299 ntAPPRIS ALT2 TSL 1 (best) BASIC11.14□□□□□ -0.63
Sox2P48432 Eef1d-205ENSMUST00000109972 1624 ntAPPRIS ALT2 TSL 1 (best) BASIC11.14□□□□□ -0.63
Sox2P48432 Sec16a-202ENSMUST00000114082 8797 ntAPPRIS ALT2 TSL 5 BASIC11.14□□□□□ -0.63
Sox2P48432 Gm8155-201ENSMUST00000216363 1612 ntBASIC11.14□□□□□ -0.63
Sox2P48432 Setx-201ENSMUST00000061578 10970 ntAPPRIS P1 TSL 5 BASIC11.14□□□□□ -0.63
Sox2P48432 Nfe2-207ENSMUST00000134554 1761 ntAPPRIS P1 TSL 2 BASIC11.14□□□□□ -0.63
Sox2P48432 Sostdc1-201ENSMUST00000041407 1781 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Sox2P48432 Kalrn-206ENSMUST00000114954 4677 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
Sox2P48432 Lgals8-201ENSMUST00000099820 2736 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Sox2P48432 Abi1-208ENSMUST00000139038 2899 ntAPPRIS ALT1 TSL 5 BASIC11.14□□□□□ -0.63
Sox2P48432 6030407O03Rik-201ENSMUST00000189514 2094 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
Sox2P48432 Tpm1-207ENSMUST00000113687 962 ntTSL 5 BASIC11.14□□□□□ -0.63
Sox2P48432 Rpsa-ps9-201ENSMUST00000120702 885 ntBASIC11.14□□□□□ -0.63
Sox2P48432 Chchd7-207ENSMUST00000121210 548 ntTSL 2 BASIC11.14□□□□□ -0.63
Sox2P48432 Gm16175-201ENSMUST00000128181 248 ntTSL 3 BASIC11.14□□□□□ -0.63
Sox2P48432 Rpl19-201ENSMUST00000017548 751 ntAPPRIS P3 TSL 1 (best) BASIC11.14□□□□□ -0.63
Sox2P48432 C430014B12Rik-201ENSMUST00000181720 1001 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
Sox2P48432 Ffar3-202ENSMUST00000185748 1234 ntAPPRIS P1 BASIC11.14□□□□□ -0.63
Sox2P48432 1700025N23Rik-201ENSMUST00000186189 915 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
Sox2P48432 Pced1c-ps-201ENSMUST00000187740 751 ntBASIC11.14□□□□□ -0.63
Sox2P48432 Ighv5-13-201ENSMUST00000193550 290 ntBASIC11.14□□□□□ -0.63
Sox2P48432 Gm17931-201ENSMUST00000208132 634 ntBASIC11.14□□□□□ -0.63
Sox2P48432 Tomm20l-201ENSMUST00000021482 578 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Sox2P48432 AC112680.3-201ENSMUST00000215297 488 ntTSL 3 BASIC11.14□□□□□ -0.63
Sox2P48432 Gm5035-201ENSMUST00000215581 927 ntBASIC11.14□□□□□ -0.63
Sox2P48432 Tex12-202ENSMUST00000217236 1003 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Sox2P48432 Gm4935-201ENSMUST00000221316 1198 ntBASIC11.14□□□□□ -0.63
Sox2P48432 Med8-202ENSMUST00000073881 1052 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
Sox2P48432 n-R5s195-201ENSMUST00000082891 119 ntBASIC11.14□□□□□ -0.63
Sox2P48432 Rpl19-202ENSMUST00000092425 737 ntAPPRIS ALT1 TSL 3 BASIC11.14□□□□□ -0.63
Sox2P48432 Atp1a3-201ENSMUST00000080882 3621 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Sox2P48432 AC154671.1-201ENSMUST00000228617 1578 ntBASIC11.14□□□□□ -0.63
Sox2P48432 Atp4a-204ENSMUST00000170371 3447 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
Sox2P48432 Rpap1-202ENSMUST00000099529 4813 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Sox2P48432 Spag16-202ENSMUST00000113940 3559 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
Sox2P48432 Taf9b-201ENSMUST00000055497 2633 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Sox2P48432 Myo1b-201ENSMUST00000018561 4767 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Sox2P48432 Otud7b-202ENSMUST00000090785 8101 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Sox2P48432 Smc4-202ENSMUST00000107803 3983 ntTSL 5 BASIC11.14□□□□□ -0.63
Sox2P48432 Lrrfip2-214ENSMUST00000217117 1363 ntTSL 5 BASIC11.14□□□□□ -0.63
Sox2P48432 Poc1a-211ENSMUST00000217213 1398 ntTSL 5 BASIC11.14□□□□□ -0.63
Sox2P48432 Gm18986-201ENSMUST00000216029 1986 ntBASIC11.14□□□□□ -0.63
Sox2P48432 Wdcp-202ENSMUST00000085793 1992 ntAPPRIS ALT2 TSL 2 BASIC11.14□□□□□ -0.63
Sox2P48432 Ssh1-201ENSMUST00000077689 3164 ntAPPRIS ALT2 TSL 1 (best) BASIC11.14□□□□□ -0.63
Sox2P48432 Ptprh-201ENSMUST00000049113 3495 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Sox2P48432 Pip5k1a-204ENSMUST00000107232 3437 ntAPPRIS ALT2 TSL 5 BASIC11.13□□□□□ -0.63
Sox2P48432 St14-201ENSMUST00000034478 3259 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Sox2P48432 Wt1os-203ENSMUST00000172701 2960 ntTSL 2 BASIC11.13□□□□□ -0.63
Sox2P48432 Fut8-203ENSMUST00000177595 2980 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Sox2P48432 Hvcn1-202ENSMUST00000100747 2805 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Sox2P48432 Plin4-202ENSMUST00000190703 5756 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Sox2P48432 Slc5a8-201ENSMUST00000020255 5331 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Sox2P48432 Dcun1d3-202ENSMUST00000098080 3072 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Sox2P48432 Tspan14-202ENSMUST00000224209 2477 ntAPPRIS P1 BASIC11.13□□□□□ -0.63
Sox2P48432 Zeb2-212ENSMUST00000176438 9124 ntAPPRIS P2 TSL 5 BASIC11.13□□□□□ -0.63
Sox2P48432 Mamld1-202ENSMUST00000114629 3346 ntAPPRIS ALT2 TSL 5 BASIC11.13□□□□□ -0.63
Sox2P48432 Vps54-201ENSMUST00000006221 4323 ntAPPRIS P3 TSL 1 (best) BASIC11.13□□□□□ -0.63
Sox2P48432 Mab21l3-202ENSMUST00000118411 2700 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Sox2P48432 Slco3a1-202ENSMUST00000098371 2709 ntAPPRIS ALT1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Sox2P48432 Ttc30b-201ENSMUST00000099996 2737 ntAPPRIS P1 BASIC11.13□□□□□ -0.63
Sox2P48432 Lrguk-202ENSMUST00000101564 967 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
Sox2P48432 Hist1h2br-202ENSMUST00000110476 381 ntAPPRIS P1 BASIC11.13□□□□□ -0.63
Sox2P48432 Gm4984-201ENSMUST00000115987 360 ntBASIC11.13□□□□□ -0.63
Sox2P48432 3110056K07Rik-202ENSMUST00000136690 1063 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
Sox2P48432 Gm44793-201ENSMUST00000136923 582 ntTSL 2 BASIC11.13□□□□□ -0.63
Sox2P48432 Gm13570-201ENSMUST00000140763 309 ntBASIC11.13□□□□□ -0.63
Sox2P48432 Tead1-207ENSMUST00000165036 1248 ntTSL 5 BASIC11.13□□□□□ -0.63
Sox2P48432 1700121N20Rik-201ENSMUST00000167922 1027 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
Sox2P48432 Tead1-212ENSMUST00000171197 1074 ntTSL 5 BASIC11.13□□□□□ -0.63
Sox2P48432 Ube2i-208ENSMUST00000173084 1286 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Sox2P48432 Lsm10-203ENSMUST00000179323 808 ntAPPRIS P1 TSL 2 BASIC11.13□□□□□ -0.63
Sox2P48432 Xpnpep1-211ENSMUST00000183274 2120 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
Sox2P48432 Ggt5-203ENSMUST00000189972 648 ntTSL 3 BASIC11.13□□□□□ -0.63
Sox2P48432 Gm37201-201ENSMUST00000191845 523 ntBASIC11.13□□□□□ -0.63
Sox2P48432 Gm42980-201ENSMUST00000200582 1028 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
Sox2P48432 AC122463.1-201ENSMUST00000214559 597 ntTSL 3 BASIC11.13□□□□□ -0.63
Sox2P48432 Tmem108-206ENSMUST00000215136 724 ntTSL 3 BASIC11.13□□□□□ -0.63
Sox2P48432 AC160029.2-201ENSMUST00000218285 548 ntTSL 3 BASIC11.13□□□□□ -0.63
Sox2P48432 AC159474.1-201ENSMUST00000218454 374 ntTSL 3 BASIC11.13□□□□□ -0.63
Sox2P48432 Erp27-201ENSMUST00000032343 1029 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Sox2P48432 Fgl1-201ENSMUST00000034003 1120 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Sox2P48432 Hist1h2bq-201ENSMUST00000078156 381 ntAPPRIS P1 BASIC11.13□□□□□ -0.63
Sox2P48432 Gm11559-201ENSMUST00000092694 1096 ntAPPRIS P1 BASIC11.13□□□□□ -0.63
Sox2P48432 Gm11525-201ENSMUST00000134436 2804 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
Sox2P48432 Zfp280d-205ENSMUST00000183468 1834 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
Sox2P48432 Dzip1l-202ENSMUST00000112884 3791 ntAPPRIS ALT2 TSL 5 BASIC11.13□□□□□ -0.63
Retrieved 100 of 76,532 protein–RNA pairs in 66.8 ms