Protein–RNA interactions for Protein: P39749

Fen1, Flap endonuclease 1, mousemouse

Predictions only

Length 378 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Fen1P39749 Aldoa-203ENSMUST00000106348 1460 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Fen1P39749 Tnfaip8l3-201ENSMUST00000098760 4403 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Fen1P39749 Sash3-201ENSMUST00000033427 2677 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Fen1P39749 Gm43860-201ENSMUST00000201742 2705 ntBASIC12.01□□□□□ -0.49
Fen1P39749 Nol6-201ENSMUST00000030138 4599 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Fen1P39749 Calm1-201ENSMUST00000001204 3987 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Fen1P39749 Hvcn1-202ENSMUST00000100747 2805 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Fen1P39749 Coro6-204ENSMUST00000102493 2804 ntAPPRIS ALT1 TSL 5 BASIC12.01□□□□□ -0.49
Fen1P39749 Gpatch2l-204ENSMUST00000221368 4355 ntAPPRIS P2 TSL 1 (best) BASIC12□□□□□ -0.49
Fen1P39749 Ttc3-202ENSMUST00000119131 3212 ntTSL 1 (best) BASIC12□□□□□ -0.49
Fen1P39749 Plekhb1-203ENSMUST00000107044 1806 ntAPPRIS ALT1 TSL 1 (best) BASIC12□□□□□ -0.49
Fen1P39749 Mpp4-204ENSMUST00000186477 1885 ntAPPRIS ALT2 TSL 5 BASIC12□□□□□ -0.49
Fen1P39749 Ctsd-201ENSMUST00000066401 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC12□□□□□ -0.49
Fen1P39749 Pex11g-201ENSMUST00000004686 2870 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Fen1P39749 Uimc1-201ENSMUST00000026997 2931 ntAPPRIS P2 TSL 1 (best) BASIC12□□□□□ -0.49
Fen1P39749 Ins2-203ENSMUST00000105931 472 ntTSL 1 (best) BASIC12□□□□□ -0.49
Fen1P39749 Leng8-202ENSMUST00000117274 874 ntTSL 1 (best) BASIC12□□□□□ -0.49
Fen1P39749 D930015M05Rik-201ENSMUST00000126002 1190 ntTSL 1 (best) BASIC12□□□□□ -0.49
Fen1P39749 Gm11751-201ENSMUST00000126187 460 ntTSL 3 BASIC12□□□□□ -0.49
Fen1P39749 Gm13376-201ENSMUST00000128743 448 ntTSL 1 (best) BASIC12□□□□□ -0.49
Fen1P39749 Sumo3-206ENSMUST00000141228 772 ntTSL 3 BASIC12□□□□□ -0.49
Fen1P39749 Gm23119-201ENSMUST00000158610 140 ntBASIC12□□□□□ -0.49
Fen1P39749 Gm17420-201ENSMUST00000164753 153 ntBASIC12□□□□□ -0.49
Fen1P39749 Aif1-206ENSMUST00000173324 875 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Fen1P39749 Oaz1-207ENSMUST00000180036 1044 ntAPPRIS P2 TSL 5 BASIC12□□□□□ -0.49
Fen1P39749 Gm27731-201ENSMUST00000185192 107 ntBASIC12□□□□□ -0.49
Fen1P39749 Gm38319-201ENSMUST00000194537 1266 ntBASIC12□□□□□ -0.49
Fen1P39749 Tmem176b-206ENSMUST00000203355 1202 ntAPPRIS P1 TSL 5 BASIC12□□□□□ -0.49
Fen1P39749 Rps12-203ENSMUST00000218107 584 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Fen1P39749 Dmac1-201ENSMUST00000030103 741 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Fen1P39749 Gm11562-201ENSMUST00000073853 817 ntAPPRIS P1 BASIC12□□□□□ -0.49
Fen1P39749 Olfr1428-201ENSMUST00000087824 945 ntAPPRIS P1 BASIC12□□□□□ -0.49
Fen1P39749 Sprr2a2-202ENSMUST00000090871 722 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Fen1P39749 Gm36635-201ENSMUST00000221152 1332 ntTSL 5 BASIC12□□□□□ -0.49
Fen1P39749 Akr1b3-201ENSMUST00000102980 1387 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Fen1P39749 Chchd3-202ENSMUST00000115091 1363 ntTSL 1 (best) BASIC12□□□□□ -0.49
Fen1P39749 4930488L21Rik-201ENSMUST00000181864 3244 ntTSL 1 (best) BASIC12□□□□□ -0.49
Fen1P39749 Foxn2-201ENSMUST00000112238 5085 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Fen1P39749 Wdr13-201ENSMUST00000033506 4183 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Fen1P39749 Gm7789-202ENSMUST00000211273 1400 ntBASIC12□□□□□ -0.49
Fen1P39749 Scmh1-201ENSMUST00000000087 3353 ntAPPRIS P3 TSL 1 (best) BASIC12□□□□□ -0.49
Fen1P39749 Abi1-203ENSMUST00000093171 2411 ntAPPRIS ALT1 TSL 5 BASIC12□□□□□ -0.49
Fen1P39749 Acat1-201ENSMUST00000034547 3405 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Fen1P39749 Zfp112-204ENSMUST00000215113 2628 ntAPPRIS ALT2 TSL 5 BASIC12□□□□□ -0.49
Fen1P39749 Aire-216ENSMUST00000156417 1627 ntTSL 1 (best) BASIC12□□□□□ -0.49
Fen1P39749 Acad9-201ENSMUST00000011492 3930 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Fen1P39749 4930488B22Rik-201ENSMUST00000172500 1722 ntTSL 1 (best) BASIC12□□□□□ -0.49
Fen1P39749 Pax7-202ENSMUST00000174681 1725 ntAPPRIS ALT1 TSL 5 BASIC12□□□□□ -0.49
Fen1P39749 Hrg-201ENSMUST00000023590 1734 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Fen1P39749 Ms4a15-201ENSMUST00000087923 1713 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Fen1P39749 A230072I06Rik-201ENSMUST00000098935 1839 ntAPPRIS P1 BASIC12□□□□□ -0.49
Fen1P39749 Enpp4-201ENSMUST00000024757 4560 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Fen1P39749 Ppp2r5c-204ENSMUST00000221074 1971 ntTSL 5 BASIC11.99□□□□□ -0.49
Fen1P39749 Col6a4-201ENSMUST00000121963 7371 ntAPPRIS P1 TSL 5 BASIC11.99□□□□□ -0.49
Fen1P39749 Gm15991-202ENSMUST00000212123 3565 ntBASIC11.99□□□□□ -0.49
Fen1P39749 Smc4-202ENSMUST00000107803 3983 ntTSL 5 BASIC11.99□□□□□ -0.49
Fen1P39749 Ehmt1-203ENSMUST00000102938 4680 ntAPPRIS ALT2 TSL 1 (best) BASIC11.99□□□□□ -0.49
Fen1P39749 Pdik1l-203ENSMUST00000105877 4674 ntTSL 5 BASIC11.99□□□□□ -0.49
Fen1P39749 Mob4-205ENSMUST00000162364 2840 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Fen1P39749 Gripap1-202ENSMUST00000101694 2867 ntAPPRIS ALT2 TSL 5 BASIC11.99□□□□□ -0.49
Fen1P39749 Phyhipl-201ENSMUST00000046513 2877 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Fen1P39749 Cln8-201ENSMUST00000027554 6857 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Fen1P39749 Slc45a2-201ENSMUST00000117100 2983 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Fen1P39749 4930431P19Rik-202ENSMUST00000207761 2959 ntBASIC11.99□□□□□ -0.49
Fen1P39749 Pde4c-207ENSMUST00000224874 3099 ntAPPRIS ALT2 BASIC11.99□□□□□ -0.49
Fen1P39749 Gm37368-201ENSMUST00000193173 3212 ntBASIC11.99□□□□□ -0.49
Fen1P39749 Gm17244-201ENSMUST00000192482 3416 ntBASIC11.99□□□□□ -0.49
Fen1P39749 Cit-202ENSMUST00000102560 6213 ntAPPRIS ALT2 TSL 5 BASIC11.99□□□□□ -0.49
Fen1P39749 Fzr1-202ENSMUST00000118812 1215 ntTSL 5 BASIC11.99□□□□□ -0.49
Fen1P39749 Isg20-204ENSMUST00000121645 1087 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Fen1P39749 Shisa5-203ENSMUST00000154184 1038 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Fen1P39749 Gm44405-201ENSMUST00000198952 126 ntBASIC11.99□□□□□ -0.49
Fen1P39749 Gm9728-201ENSMUST00000200197 1055 ntBASIC11.99□□□□□ -0.49
Fen1P39749 Ceacam1-209ENSMUST00000206687 1061 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Fen1P39749 Gm4598-201ENSMUST00000206756 1080 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Fen1P39749 Gm42067-201ENSMUST00000209642 647 ntTSL 2 BASIC11.99□□□□□ -0.49
Fen1P39749 Klk1b16-201ENSMUST00000005933 1387 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Fen1P39749 Fam84a-201ENSMUST00000020926 4164 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Fen1P39749 Hsd3b3-201ENSMUST00000090743 1492 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Fen1P39749 Fry-201ENSMUST00000087204 10893 ntAPPRIS P1 TSL 5 BASIC11.99□□□□□ -0.49
Fen1P39749 H2-M2-201ENSMUST00000016427 1550 ntAPPRIS P3 TSL 1 (best) BASIC11.99□□□□□ -0.49
Fen1P39749 Spata18-203ENSMUST00000113548 1623 ntAPPRIS ALT2 TSL 5 BASIC11.99□□□□□ -0.49
Fen1P39749 Tpra1-218ENSMUST00000203185 1718 ntAPPRIS P1 TSL 5 BASIC11.99□□□□□ -0.49
Fen1P39749 H2-T22-203ENSMUST00000080015 1761 ntAPPRIS P3 TSL 1 (best) BASIC11.99□□□□□ -0.49
Fen1P39749 Il21r-202ENSMUST00000206103 2147 ntAPPRIS ALT2 TSL 1 (best) BASIC11.99□□□□□ -0.49
Fen1P39749 Gtf3c1-204ENSMUST00000205659 6570 ntAPPRIS ALT2 TSL 5 BASIC11.99□□□□□ -0.49
Fen1P39749 Rasgrp4-205ENSMUST00000159975 2296 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Fen1P39749 Ticam2-201ENSMUST00000070084 2340 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Fen1P39749 Chic1-201ENSMUST00000116547 7375 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Fen1P39749 Ccnb1-201ENSMUST00000072119 2489 ntAPPRIS P2 TSL 1 (best) BASIC11.99□□□□□ -0.49
Fen1P39749 Kifc5b-201ENSMUST00000078961 2627 ntAPPRIS P1 TSL 5 BASIC11.99□□□□□ -0.49
Fen1P39749 Ddx55-202ENSMUST00000111438 2737 ntTSL 2 BASIC11.99□□□□□ -0.49
Fen1P39749 Mindy1-202ENSMUST00000107187 2827 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Fen1P39749 Mcm2-201ENSMUST00000058011 3371 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Fen1P39749 Bub3-203ENSMUST00000207442 3414 ntAPPRIS ALT1 TSL 3 BASIC11.99□□□□□ -0.49
Fen1P39749 Camkk1-201ENSMUST00000092937 3424 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Fen1P39749 Slc26a2-202ENSMUST00000146409 7814 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Fen1P39749 Otof-201ENSMUST00000074171 7129 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Fen1P39749 Scml2-206ENSMUST00000112345 4847 ntAPPRIS ALT2 TSL 5 BASIC11.98□□□□□ -0.49
Fen1P39749 Shoc2-201ENSMUST00000025932 4106 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Retrieved 100 of 76,532 protein–RNA pairs in 35.1 ms