Protein–RNA interactions for Protein: P39061

Col18a1, Collagen alpha-1(XVIII) chain, mousemouse

Predictions only

Length 1,774 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col18a1P39061 Gm17836-201ENSMUST00000191976 1302 ntBASIC15.43■□□□□ 0.06
Col18a1P39061 Adgrd2-ps-201ENSMUST00000118797 2662 ntBASIC15.43■□□□□ 0.06
Col18a1P39061 Kifc1-201ENSMUST00000114361 2260 ntAPPRIS ALT2 TSL 5 BASIC15.43■□□□□ 0.06
Col18a1P39061 Mybph-201ENSMUST00000038445 1828 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Col18a1P39061 Rnf111-201ENSMUST00000034739 4880 ntAPPRIS P2 TSL 1 (best) BASIC15.43■□□□□ 0.06
Col18a1P39061 Gm8873-201ENSMUST00000217847 1439 ntBASIC15.42■□□□□ 0.06
Col18a1P39061 Ces2d-ps-201ENSMUST00000043209 1656 ntBASIC15.42■□□□□ 0.06
Col18a1P39061 Arpc1b-201ENSMUST00000085679 3105 ntAPPRIS P2 TSL 1 (best) BASIC15.42■□□□□ 0.06
Col18a1P39061 Acnat1-201ENSMUST00000095086 1499 ntAPPRIS P2 TSL 1 (best) BASIC15.42■□□□□ 0.06
Col18a1P39061 Scamp1-201ENSMUST00000022197 4259 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Col18a1P39061 Ntm-201ENSMUST00000075069 3022 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
Col18a1P39061 Wfdc8-202ENSMUST00000109338 1794 ntAPPRIS P3 TSL 1 (best) BASIC15.42■□□□□ 0.06
Col18a1P39061 Ighv13-1-201ENSMUST00000103480 294 ntBASIC15.42■□□□□ 0.06
Col18a1P39061 Gm29521-201ENSMUST00000187061 745 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
Col18a1P39061 Gm4753-201ENSMUST00000188327 1255 ntBASIC15.42■□□□□ 0.06
Col18a1P39061 Gm44777-203ENSMUST00000206930 571 ntTSL 3 BASIC15.42■□□□□ 0.06
Col18a1P39061 Gm44939-201ENSMUST00000206939 814 ntTSL 3 BASIC15.42■□□□□ 0.06
Col18a1P39061 Gm18041-201ENSMUST00000218210 618 ntBASIC15.42■□□□□ 0.06
Col18a1P39061 CT010505.2-201ENSMUST00000227918 998 ntBASIC15.42■□□□□ 0.06
Col18a1P39061 Hs3st3b1-201ENSMUST00000094103 4911 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Col18a1P39061 Spdye4a-201ENSMUST00000085733 1819 ntAPPRIS P2 TSL 1 (best) BASIC15.42■□□□□ 0.06
Col18a1P39061 Acsl1-202ENSMUST00000110371 2100 ntTSL 5 BASIC15.42■□□□□ 0.06
Col18a1P39061 Csde1-207ENSMUST00000197827 2671 ntAPPRIS P3 TSL 5 BASIC15.42■□□□□ 0.06
Col18a1P39061 March4-201ENSMUST00000047786 4553 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Col18a1P39061 Gm31718-201ENSMUST00000212406 1646 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
Col18a1P39061 Cgnl1-203ENSMUST00000122065 4487 ntAPPRIS P2 TSL 1 (best) BASIC15.42■□□□□ 0.06
Col18a1P39061 Tmprss4-201ENSMUST00000034599 2284 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Col18a1P39061 Mef2d-201ENSMUST00000001455 5401 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
Col18a1P39061 Ptgdr2-201ENSMUST00000037261 2644 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Col18a1P39061 Spata7-201ENSMUST00000048402 2052 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Col18a1P39061 Rara-201ENSMUST00000068133 3384 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Col18a1P39061 Rtfdc1-201ENSMUST00000029005 2173 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Col18a1P39061 Sufu-204ENSMUST00000120778 1850 ntTSL 2 BASIC15.42■□□□□ 0.06
Col18a1P39061 Gm11952-201ENSMUST00000121172 821 ntBASIC15.41■□□□□ 0.06
Col18a1P39061 2210406O10Rik-203ENSMUST00000149687 1198 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
Col18a1P39061 Gm3298-202ENSMUST00000172110 615 ntTSL 5 BASIC15.41■□□□□ 0.06
Col18a1P39061 Gm21958-201ENSMUST00000178832 648 ntAPPRIS P1 TSL 2 BASIC15.41■□□□□ 0.06
Col18a1P39061 Gm26725-201ENSMUST00000180652 1113 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
Col18a1P39061 Gm5254-201ENSMUST00000188353 977 ntBASIC15.41■□□□□ 0.06
Col18a1P39061 Gm28342-201ENSMUST00000190308 589 ntTSL 3 BASIC15.41■□□□□ 0.06
Col18a1P39061 Gm38324-201ENSMUST00000194390 411 ntTSL 3 BASIC15.41■□□□□ 0.06
Col18a1P39061 Gm43777-201ENSMUST00000197269 376 ntTSL 3 BASIC15.41■□□□□ 0.06
Col18a1P39061 Gm18555-201ENSMUST00000197935 584 ntBASIC15.41■□□□□ 0.06
Col18a1P39061 AC154435.1-201ENSMUST00000223938 959 ntBASIC15.41■□□□□ 0.06
Col18a1P39061 AC154461.1-201ENSMUST00000224207 1005 ntBASIC15.41■□□□□ 0.06
Col18a1P39061 AC107711.4-201ENSMUST00000228948 440 ntBASIC15.41■□□□□ 0.06
Col18a1P39061 Palb2-204ENSMUST00000106469 2559 ntAPPRIS ALT2 TSL 1 (best) BASIC15.41■□□□□ 0.06
Col18a1P39061 Gm7841-201ENSMUST00000122108 1629 ntBASIC15.41■□□□□ 0.06
Col18a1P39061 Myf5-201ENSMUST00000000445 2083 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Col18a1P39061 Sema6b-202ENSMUST00000167545 3847 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Col18a1P39061 Slc4a1ap-209ENSMUST00000202214 2806 ntAPPRIS P3 TSL 5 BASIC15.41■□□□□ 0.06
Col18a1P39061 Gm7104-201ENSMUST00000179741 2532 ntBASIC15.41■□□□□ 0.06
Col18a1P39061 Kcnc2-204ENSMUST00000219301 2944 ntAPPRIS P2 TSL 1 (best) BASIC15.41■□□□□ 0.06
Col18a1P39061 Zic5-201ENSMUST00000039118 4767 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Col18a1P39061 Gcfc2-201ENSMUST00000043195 4192 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Col18a1P39061 Chst4-201ENSMUST00000109222 1942 ntAPPRIS P2 TSL 1 (best) BASIC15.41■□□□□ 0.06
Col18a1P39061 Plekha7-210ENSMUST00000182834 5257 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
Col18a1P39061 Asic5-201ENSMUST00000029641 1657 ntAPPRIS P2 TSL 1 (best) BASIC15.41■□□□□ 0.06
Col18a1P39061 Pax7-201ENSMUST00000030508 5854 ntAPPRIS P2 TSL 1 (best) BASIC15.41■□□□□ 0.06
Col18a1P39061 Rcan2-202ENSMUST00000044895 3363 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
Col18a1P39061 AC148324.1-201ENSMUST00000219034 4240 ntBASIC15.41■□□□□ 0.06
Col18a1P39061 Gm25288-201ENSMUST00000122800 265 ntBASIC15.41■□□□□ 0.06
Col18a1P39061 Gm15952-202ENSMUST00000144542 556 ntTSL 3 BASIC15.41■□□□□ 0.06
Col18a1P39061 2810433D01Rik-202ENSMUST00000154798 1045 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
Col18a1P39061 AC163703.1-201ENSMUST00000214133 339 ntAPPRIS P1 TSL 2 BASIC15.41■□□□□ 0.06
Col18a1P39061 CT030195.2-201ENSMUST00000226074 1286 ntBASIC15.41■□□□□ 0.06
Col18a1P39061 Mptx1-201ENSMUST00000027816 799 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Col18a1P39061 Olfr115-201ENSMUST00000076936 939 ntAPPRIS P2 BASIC15.41■□□□□ 0.06
Col18a1P39061 Miga1-204ENSMUST00000199334 4024 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
Col18a1P39061 Kansl3-205ENSMUST00000186470 2801 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
Col18a1P39061 Ap2a1-202ENSMUST00000107857 3301 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
Col18a1P39061 Pxylp1-201ENSMUST00000078478 2908 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Col18a1P39061 Stau2-206ENSMUST00000128957 3907 ntTSL 5 BASIC15.4■□□□□ 0.06
Col18a1P39061 Xpo1-202ENSMUST00000102869 6004 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Col18a1P39061 5033428I22Rik-201ENSMUST00000181638 2040 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
Col18a1P39061 Slc25a21-201ENSMUST00000044634 2609 ntAPPRIS P3 TSL 1 (best) BASIC15.4■□□□□ 0.06
Col18a1P39061 Gne-209ENSMUST00000173234 2149 ntTSL 5 BASIC15.4■□□□□ 0.06
Col18a1P39061 Ppp1cb-201ENSMUST00000015100 5962 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Col18a1P39061 Olfr222-203ENSMUST00000215339 2166 ntAPPRIS P1 TSL 5 BASIC15.4■□□□□ 0.06
Col18a1P39061 Btbd11-203ENSMUST00000105307 5788 ntAPPRIS P3 TSL 1 (best) BASIC15.4■□□□□ 0.06
Col18a1P39061 Entpd4-201ENSMUST00000064831 1842 ntAPPRIS P1 TSL 5 BASIC15.4■□□□□ 0.06
Col18a1P39061 Igf2-201ENSMUST00000000033 3708 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Col18a1P39061 Lyrm1-202ENSMUST00000106516 1069 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Col18a1P39061 Gm11540-201ENSMUST00000117457 780 ntBASIC15.4■□□□□ 0.06
Col18a1P39061 Gm15617-201ENSMUST00000118973 771 ntBASIC15.4■□□□□ 0.06
Col18a1P39061 Tsc22d3-204ENSMUST00000123898 952 ntTSL 5 BASIC15.4■□□□□ 0.06
Col18a1P39061 Gm16441-201ENSMUST00000138176 924 ntBASIC15.4■□□□□ 0.06
Col18a1P39061 Gm12972-201ENSMUST00000152986 1006 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
Col18a1P39061 Gpr137c-201ENSMUST00000146150 3917 ntAPPRIS P2 TSL 5 BASIC15.4■□□□□ 0.06
Col18a1P39061 Sirt5-201ENSMUST00000066804 1367 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Col18a1P39061 Elfn2-201ENSMUST00000088592 4846 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Col18a1P39061 1810019N24Rik-201ENSMUST00000181128 1474 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
Col18a1P39061 Eno3-201ENSMUST00000072841 1454 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Col18a1P39061 Eps8l3-201ENSMUST00000037375 2271 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Col18a1P39061 Psap-203ENSMUST00000165878 2564 ntAPPRIS ALT2 TSL 1 (best) BASIC15.4■□□□□ 0.06
Col18a1P39061 Crocc-202ENSMUST00000097816 6273 ntTSL 5 BASIC15.4■□□□□ 0.06
Col18a1P39061 Lsamp-208ENSMUST00000189358 2766 ntTSL 5 BASIC15.4■□□□□ 0.06
Col18a1P39061 Fam83e-201ENSMUST00000129507 2908 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Col18a1P39061 Ube2v1-202ENSMUST00000109207 2041 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Col18a1P39061 Syk-203ENSMUST00000120135 5363 ntAPPRIS P2 TSL 1 (best) BASIC15.39■□□□□ 0.05
Retrieved 100 of 76,532 protein–RNA pairs in 35.4 ms