Protein–RNA interactions for Protein: P32958

Rom1, Rod outer segment membrane protein 1, mousemouse

Predictions only

Length 351 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rom1P32958 Atic-201ENSMUST00000027384 2845 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
Rom1P32958 H2-T24-201ENSMUST00000113760 2182 ntAPPRIS P1 TSL 2 BASIC9.41□□□□□ -0.9
Rom1P32958 Sell-201ENSMUST00000027871 2199 ntAPPRIS P2 TSL 1 (best) BASIC9.41□□□□□ -0.9
Rom1P32958 Dlec1-208ENSMUST00000165231 5263 ntAPPRIS P2 TSL 5 BASIC9.41□□□□□ -0.9
Rom1P32958 Clcn4-201ENSMUST00000000619 4607 ntAPPRIS P3 TSL 1 (best) BASIC9.41□□□□□ -0.9
Rom1P32958 Anks1b-224ENSMUST00000182960 3397 ntTSL 5 BASIC9.41□□□□□ -0.9
Rom1P32958 Il21r-202ENSMUST00000206103 2147 ntAPPRIS ALT2 TSL 1 (best) BASIC9.41□□□□□ -0.9
Rom1P32958 G6pdx-201ENSMUST00000004327 2652 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
Rom1P32958 Scpep1-201ENSMUST00000000287 2097 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
Rom1P32958 Prss30-201ENSMUST00000024936 1470 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
Rom1P32958 Nhsl1-201ENSMUST00000037341 7321 ntAPPRIS P3 TSL 5 BASIC9.41□□□□□ -0.9
Rom1P32958 Nnt-203ENSMUST00000109204 3198 ntTSL 5 BASIC9.41□□□□□ -0.9
Rom1P32958 Aoc2-201ENSMUST00000041095 2543 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
Rom1P32958 Sgk1-201ENSMUST00000020145 2456 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
Rom1P32958 Calhm2-201ENSMUST00000035822 2458 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
Rom1P32958 Jaml-201ENSMUST00000050020 2461 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
Rom1P32958 Nr4a2-202ENSMUST00000112627 2400 ntTSL 5 BASIC9.41□□□□□ -0.9
Rom1P32958 Polm-201ENSMUST00000020767 2924 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
Rom1P32958 Gm37969-201ENSMUST00000195777 3409 ntBASIC9.41□□□□□ -0.9
Rom1P32958 Abt1-201ENSMUST00000041782 4456 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
Rom1P32958 Bahcc1-203ENSMUST00000122148 10712 ntAPPRIS ALT2 TSL 1 (best) BASIC9.41□□□□□ -0.9
Rom1P32958 Hypk-204ENSMUST00000126764 961 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
Rom1P32958 Arid2-202ENSMUST00000134985 809 ntTSL 1 (best) BASIC9.41□□□□□ -0.9
Rom1P32958 Ntpcr-205ENSMUST00000143504 520 ntTSL 5 BASIC9.41□□□□□ -0.9
Rom1P32958 Gm20652-201ENSMUST00000177314 383 ntTSL 2 BASIC9.41□□□□□ -0.9
Rom1P32958 Gm8494-201ENSMUST00000178171 1233 ntBASIC9.41□□□□□ -0.9
Rom1P32958 Gm6114-201ENSMUST00000182472 968 ntBASIC9.41□□□□□ -0.9
Rom1P32958 Ggt5-203ENSMUST00000189972 648 ntTSL 3 BASIC9.41□□□□□ -0.9
Rom1P32958 1700028J19Rik-201ENSMUST00000037220 1245 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
Rom1P32958 Gm22058-201ENSMUST00000083393 310 ntBASIC9.41□□□□□ -0.9
Rom1P32958 Lgals1-201ENSMUST00000089377 800 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
Rom1P32958 Nop16-201ENSMUST00000026987 1756 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
Rom1P32958 Pou1f1-201ENSMUST00000004964 1773 ntTSL 5 BASIC9.41□□□□□ -0.9
Rom1P32958 Phf8-205ENSMUST00000112668 2291 ntAPPRIS ALT2 TSL 1 (best) BASIC9.41□□□□□ -0.9
Rom1P32958 Add2-208ENSMUST00000203786 2289 ntAPPRIS P3 TSL 1 (best) BASIC9.41□□□□□ -0.9
Rom1P32958 Knop1-206ENSMUST00000126792 3253 ntAPPRIS ALT2 TSL 1 (best) BASIC9.41□□□□□ -0.9
Rom1P32958 Nhlh2-201ENSMUST00000066187 3761 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
Rom1P32958 Ms4a15-201ENSMUST00000087923 1713 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
Rom1P32958 Mmel1-203ENSMUST00000105634 2669 ntAPPRIS ALT2 TSL 5 BASIC9.41□□□□□ -0.9
Rom1P32958 Sp4-203ENSMUST00000222314 2677 ntAPPRIS P2 TSL 1 (best) BASIC9.41□□□□□ -0.9
Rom1P32958 Tmem25-202ENSMUST00000114705 2649 ntAPPRIS ALT2 TSL 1 (best) BASIC9.41□□□□□ -0.9
Rom1P32958 Sirt2-208ENSMUST00000155327 2117 ntAPPRIS ALT2 TSL 5 BASIC9.41□□□□□ -0.9
Rom1P32958 Cdc42ep4-201ENSMUST00000053536 3008 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
Rom1P32958 Ndel1-202ENSMUST00000101017 1646 ntTSL 1 (best) BASIC9.41□□□□□ -0.9
Rom1P32958 Fip1l1-204ENSMUST00000113536 4769 ntAPPRIS ALT2 TSL 1 (best) BASIC9.41□□□□□ -0.9
Rom1P32958 Zfp217-202ENSMUST00000109155 5670 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
Rom1P32958 Pidd1-202ENSMUST00000106005 2900 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
Rom1P32958 Pcdhga7-201ENSMUST00000192511 4730 ntAPPRIS P2 TSL 1 (best) BASIC9.41□□□□□ -0.9
Rom1P32958 Srebf1-201ENSMUST00000020846 4299 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
Rom1P32958 Fank1-201ENSMUST00000065359 2004 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
Rom1P32958 Sez6l-201ENSMUST00000075387 6055 ntAPPRIS P3 TSL 1 (best) BASIC9.41□□□□□ -0.9
Rom1P32958 Fbln2-202ENSMUST00000113498 4644 ntTSL 1 (best) BASIC9.41□□□□□ -0.9
Rom1P32958 Gm45449-201ENSMUST00000211485 1960 ntTSL 1 (best) BASIC9.41□□□□□ -0.9
Rom1P32958 Slc7a4-207ENSMUST00000172164 3281 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
Rom1P32958 Lnx2-201ENSMUST00000016664 4557 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
Rom1P32958 Gm38089-201ENSMUST00000193585 1514 ntBASIC9.41□□□□□ -0.9
Rom1P32958 Wfdc8-201ENSMUST00000094351 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC9.41□□□□□ -0.9
Rom1P32958 Nefm-202ENSMUST00000111089 3680 ntAPPRIS ALT2 TSL 1 (best) BASIC9.41□□□□□ -0.9
Rom1P32958 Robo4-201ENSMUST00000102895 3226 ntAPPRIS P3 TSL 1 (best) BASIC9.41□□□□□ -0.9
Rom1P32958 Ddx55-202ENSMUST00000111438 2737 ntTSL 2 BASIC9.4□□□□□ -0.9
Rom1P32958 Gm20649-201ENSMUST00000160950 2740 ntTSL 2 BASIC9.4□□□□□ -0.9
Rom1P32958 CT025681.1-201ENSMUST00000225453 1855 ntBASIC9.4□□□□□ -0.9
Rom1P32958 4931415C17Rik-202ENSMUST00000131064 2255 ntTSL 1 (best) BASIC9.4□□□□□ -0.9
Rom1P32958 Skp1a-201ENSMUST00000037324 1440 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.9
Rom1P32958 Entpd4-201ENSMUST00000064831 1842 ntAPPRIS P1 TSL 5 BASIC9.4□□□□□ -0.9
Rom1P32958 AC159195.3-201ENSMUST00000225162 2211 ntBASIC9.4□□□□□ -0.9
Rom1P32958 Rai2-201ENSMUST00000061514 2204 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.9
Rom1P32958 Gdap2-201ENSMUST00000029459 3008 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.9
Rom1P32958 Aldh4a1-201ENSMUST00000039818 3382 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.9
Rom1P32958 Hdac7-205ENSMUST00000118294 4069 ntAPPRIS ALT2 TSL 1 (best) BASIC9.4□□□□□ -0.9
Rom1P32958 Tnfsf13b-203ENSMUST00000207792 4771 ntAPPRIS P3 TSL 1 (best) BASIC9.4□□□□□ -0.9
Rom1P32958 Fn1-203ENSMUST00000186129 7797 ntAPPRIS ALT2 TSL 1 (best) BASIC9.4□□□□□ -0.9
Rom1P32958 4931428F04Rik-202ENSMUST00000171788 3552 ntAPPRIS P1 TSL 5 BASIC9.4□□□□□ -0.9
Rom1P32958 Psd2-203ENSMUST00000175734 4300 ntAPPRIS ALT2 TSL 1 (best) BASIC9.4□□□□□ -0.9
Rom1P32958 Odf2l-204ENSMUST00000106192 2425 ntAPPRIS P1 TSL 5 BASIC9.4□□□□□ -0.9
Rom1P32958 Gm38115-201ENSMUST00000194317 2413 ntTSL 5 BASIC9.4□□□□□ -0.9
Rom1P32958 Per1-202ENSMUST00000101004 3507 ntTSL 1 (best) BASIC9.4□□□□□ -0.9
Rom1P32958 Plcd4-205ENSMUST00000113749 4648 ntAPPRIS ALT2 TSL 5 BASIC9.4□□□□□ -0.9
Rom1P32958 Kars-201ENSMUST00000034426 2008 ntAPPRIS P3 TSL 1 (best) BASIC9.4□□□□□ -0.9
Rom1P32958 Arpc3-203ENSMUST00000111713 708 ntTSL 3 BASIC9.4□□□□□ -0.9
Rom1P32958 Gm13326-201ENSMUST00000118730 1011 ntBASIC9.4□□□□□ -0.9
Rom1P32958 Emd-204ENSMUST00000119197 768 ntTSL 3 BASIC9.4□□□□□ -0.9
Rom1P32958 Gm11803-201ENSMUST00000119966 444 ntBASIC9.4□□□□□ -0.9
Rom1P32958 4930527A07Rik-201ENSMUST00000130677 559 ntTSL 1 (best) BASIC9.4□□□□□ -0.9
Rom1P32958 4932443L11Rik-201ENSMUST00000148353 414 ntTSL 5 BASIC9.4□□□□□ -0.9
Rom1P32958 Grp-202ENSMUST00000173530 617 ntAPPRIS ALT2 TSL 2 BASIC9.4□□□□□ -0.9
Rom1P32958 2610306M01Rik-201ENSMUST00000185414 1042 ntBASIC9.4□□□□□ -0.9
Rom1P32958 Ffar3-202ENSMUST00000185748 1234 ntAPPRIS P1 BASIC9.4□□□□□ -0.9
Rom1P32958 H2-Bl-209ENSMUST00000194244 862 ntTSL 1 (best) BASIC9.4□□□□□ -0.9
Rom1P32958 Myl10-203ENSMUST00000196436 598 ntTSL 3 BASIC9.4□□□□□ -0.9
Rom1P32958 Igkv2-116-201ENSMUST00000199327 362 ntBASIC9.4□□□□□ -0.9
Rom1P32958 1700018A23Rik-201ENSMUST00000201350 398 ntTSL 1 (best) BASIC9.4□□□□□ -0.9
Rom1P32958 Blvra-201ENSMUST00000002064 1160 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.9
Rom1P32958 Gm44872-201ENSMUST00000207864 420 ntBASIC9.4□□□□□ -0.9
Rom1P32958 Fam25c-201ENSMUST00000052126 408 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.9
Rom1P32958 1600017P15Rik-201ENSMUST00000083427 412 ntBASIC9.4□□□□□ -0.9
Rom1P32958 Gm10570-201ENSMUST00000097865 513 ntAPPRIS P1 BASIC9.4□□□□□ -0.9
Rom1P32958 Gm8155-201ENSMUST00000216363 1612 ntBASIC9.4□□□□□ -0.9
Rom1P32958 Dmbx1-203ENSMUST00000124071 4017 ntAPPRIS P2 TSL 1 (best) BASIC9.4□□□□□ -0.9
Rom1P32958 Wt1os-203ENSMUST00000172701 2960 ntTSL 2 BASIC9.4□□□□□ -0.9
Retrieved 100 of 76,532 protein–RNA pairs in 67.2 ms