Protein–RNA interactions for Protein: P28862

Mmp3, Stromelysin-1, mousemouse

Predictions only

Length 477 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Mmp3P28862 Ly6e-210ENSMUST00000188866 2068 ntAPPRIS P1 TSL 3 BASIC12.74□□□□□ -0.37
Mmp3P28862 4931429P17Rik-201ENSMUST00000061899 2012 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Mmp3P28862 Sv2b-202ENSMUST00000165175 5524 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Mmp3P28862 Trpm4-209ENSMUST00000211743 3673 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Mmp3P28862 Psmc3-201ENSMUST00000002171 1819 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Mmp3P28862 Llgl2-201ENSMUST00000103032 3551 ntAPPRIS P3 TSL 1 (best) BASIC12.74□□□□□ -0.37
Mmp3P28862 Psmc2-201ENSMUST00000030769 1785 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Mmp3P28862 Muc6-202ENSMUST00000189314 5087 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Mmp3P28862 Adh5-201ENSMUST00000005964 1604 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Mmp3P28862 Zfp810-201ENSMUST00000086278 3238 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Mmp3P28862 Pip5kl1-201ENSMUST00000055304 1577 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Mmp3P28862 Bcas3-201ENSMUST00000074875 2814 ntAPPRIS P3 TSL 5 BASIC12.74□□□□□ -0.37
Mmp3P28862 Dnmt3bos-201ENSMUST00000124988 718 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Mmp3P28862 Gm6485-201ENSMUST00000160676 439 ntBASIC12.74□□□□□ -0.37
Mmp3P28862 1700088E04Rik-201ENSMUST00000169604 1249 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Mmp3P28862 Gm6114-201ENSMUST00000182472 968 ntBASIC12.74□□□□□ -0.37
Mmp3P28862 Gm9866-204ENSMUST00000183238 351 ntTSL 5 BASIC12.74□□□□□ -0.37
Mmp3P28862 Gm27390-201ENSMUST00000184516 176 ntBASIC12.74□□□□□ -0.37
Mmp3P28862 Gm27910-201ENSMUST00000185004 107 ntBASIC12.74□□□□□ -0.37
Mmp3P28862 1700088E04Rik-203ENSMUST00000186053 535 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Mmp3P28862 Gm29088-201ENSMUST00000189363 581 ntTSL 3 BASIC12.74□□□□□ -0.37
Mmp3P28862 Gm37299-201ENSMUST00000193951 826 ntBASIC12.74□□□□□ -0.37
Mmp3P28862 Gm42599-201ENSMUST00000201308 469 ntBASIC12.74□□□□□ -0.37
Mmp3P28862 Nkg7-203ENSMUST00000206741 686 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Mmp3P28862 Gm10318-202ENSMUST00000217996 639 ntTSL 5 BASIC12.74□□□□□ -0.37
Mmp3P28862 AC115122.1-201ENSMUST00000224850 1040 ntBASIC12.74□□□□□ -0.37
Mmp3P28862 Rpl35a-201ENSMUST00000078804 491 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Mmp3P28862 Pnpla6-211ENSMUST00000207941 4263 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Mmp3P28862 Tti2-202ENSMUST00000209851 3133 ntAPPRIS P3 TSL 1 (best) BASIC12.74□□□□□ -0.37
Mmp3P28862 Irak1-203ENSMUST00000101458 2052 ntAPPRIS ALT2 TSL 5 BASIC12.74□□□□□ -0.37
Mmp3P28862 Cfap100-207ENSMUST00000165673 2072 ntAPPRIS P2 TSL 5 BASIC12.74□□□□□ -0.37
Mmp3P28862 Gm16564-201ENSMUST00000162545 3010 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Mmp3P28862 Sema4a-202ENSMUST00000107531 2897 ntTSL 5 BASIC12.74□□□□□ -0.37
Mmp3P28862 Tfe3-205ENSMUST00000115678 2658 ntTSL 5 BASIC12.74□□□□□ -0.37
Mmp3P28862 Gabpb1-205ENSMUST00000110424 2613 ntAPPRIS P3 TSL 1 (best) BASIC12.74□□□□□ -0.37
Mmp3P28862 Syn1-202ENSMUST00000115345 3261 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Mmp3P28862 1110059E24Rik-201ENSMUST00000038830 1614 ntAPPRIS P2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Mmp3P28862 Bak1-202ENSMUST00000078691 2387 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Mmp3P28862 Clpx-202ENSMUST00000113824 2809 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Mmp3P28862 Celsr1-201ENSMUST00000016172 10879 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Mmp3P28862 Papss1-201ENSMUST00000029666 2600 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Mmp3P28862 Cela3b-201ENSMUST00000102522 926 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Mmp3P28862 Gm16166-201ENSMUST00000118291 787 ntBASIC12.73□□□□□ -0.37
Mmp3P28862 Gm16071-201ENSMUST00000119589 793 ntBASIC12.73□□□□□ -0.37
Mmp3P28862 Dmrtc1a-204ENSMUST00000121197 1067 ntAPPRIS P2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Mmp3P28862 Anp32a-205ENSMUST00000135395 924 ntAPPRIS ALT2 TSL 5 BASIC12.73□□□□□ -0.37
Mmp3P28862 1110028F11Rik-201ENSMUST00000137077 837 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Mmp3P28862 2610005L07Rik-201ENSMUST00000139264 948 ntBASIC12.73□□□□□ -0.37
Mmp3P28862 Higd1c-201ENSMUST00000175683 507 ntAPPRIS P1 TSL 3 BASIC12.73□□□□□ -0.37
Mmp3P28862 Gm21092-201ENSMUST00000178995 955 ntBASIC12.73□□□□□ -0.37
Mmp3P28862 Smlr1-201ENSMUST00000179685 669 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Mmp3P28862 Plac9a-202ENSMUST00000183431 536 ntTSL 3 BASIC12.73□□□□□ -0.37
Mmp3P28862 Plac9b-204ENSMUST00000184675 536 ntTSL 3 BASIC12.73□□□□□ -0.37
Mmp3P28862 Gm17826-201ENSMUST00000189720 798 ntBASIC12.73□□□□□ -0.37
Mmp3P28862 Olfr431-ps1-201ENSMUST00000192435 544 ntBASIC12.73□□□□□ -0.37
Mmp3P28862 Ighv6-7-201ENSMUST00000193397 357 ntAPPRIS P1 BASIC12.73□□□□□ -0.37
Mmp3P28862 Gm5542-201ENSMUST00000195485 1089 ntBASIC12.73□□□□□ -0.37
Mmp3P28862 Gm17590-202ENSMUST00000197881 1232 ntTSL 2 BASIC12.73□□□□□ -0.37
Mmp3P28862 Fgf5-202ENSMUST00000200059 600 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Mmp3P28862 3300002P13Rik-201ENSMUST00000204020 1092 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Mmp3P28862 Gm6108-201ENSMUST00000208365 367 ntBASIC12.73□□□□□ -0.37
Mmp3P28862 Olfr354-201ENSMUST00000068475 1084 ntAPPRIS P1 BASIC12.73□□□□□ -0.37
Mmp3P28862 Ifnab-201ENSMUST00000071378 1058 ntAPPRIS P1 BASIC12.73□□□□□ -0.37
Mmp3P28862 Eif2ak1-201ENSMUST00000100487 4325 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Mmp3P28862 Mafk-202ENSMUST00000110836 3097 ntAPPRIS P1 TSL 5 BASIC12.73□□□□□ -0.37
Mmp3P28862 Trpc7-207ENSMUST00000173817 2406 ntTSL 5 BASIC12.73□□□□□ -0.37
Mmp3P28862 Trpc7-208ENSMUST00000174457 2424 ntTSL 5 BASIC12.73□□□□□ -0.37
Mmp3P28862 Gucy2e-201ENSMUST00000021259 8331 ntAPPRIS P1 TSL 5 BASIC12.73□□□□□ -0.37
Mmp3P28862 2610001J05Rik-203ENSMUST00000185219 1606 ntAPPRIS P1 BASIC12.73□□□□□ -0.37
Mmp3P28862 Rad51c-201ENSMUST00000007790 1632 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Mmp3P28862 Msh6-201ENSMUST00000005503 4254 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Mmp3P28862 Oxsm-202ENSMUST00000112624 1586 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Mmp3P28862 Ormdl2-201ENSMUST00000026409 1573 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Mmp3P28862 Gm45199-201ENSMUST00000207640 1507 ntBASIC12.72□□□□□ -0.37
Mmp3P28862 D030025P21Rik-202ENSMUST00000220643 3987 ntBASIC12.72□□□□□ -0.37
Mmp3P28862 Zmym1-202ENSMUST00000106099 2982 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Mmp3P28862 Ctsc-201ENSMUST00000032779 2493 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Mmp3P28862 H2-T10-201ENSMUST00000166442 1481 ntAPPRIS P1 TSL 5 BASIC12.72□□□□□ -0.37
Mmp3P28862 Lzts3-202ENSMUST00000089561 4169 ntAPPRIS P3 TSL 5 BASIC12.72□□□□□ -0.37
Mmp3P28862 4931415C17Rik-202ENSMUST00000131064 2255 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Mmp3P28862 Qpctl-201ENSMUST00000032566 2710 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Mmp3P28862 A830082K12Rik-201ENSMUST00000123998 2203 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Mmp3P28862 Slc35b3-202ENSMUST00000167513 1778 ntAPPRIS P3 TSL 1 (best) BASIC12.72□□□□□ -0.37
Mmp3P28862 Elk1-201ENSMUST00000009550 3548 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Mmp3P28862 Nol4-206ENSMUST00000164186 2622 ntAPPRIS P4 TSL 5 BASIC12.72□□□□□ -0.37
Mmp3P28862 Vwf-202ENSMUST00000112253 2184 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Mmp3P28862 Krtap4-16-201ENSMUST00000107437 954 ntAPPRIS P1 BASIC12.72□□□□□ -0.37
Mmp3P28862 Olfr1258-202ENSMUST00000111516 936 ntAPPRIS P1 BASIC12.72□□□□□ -0.37
Mmp3P28862 Cav2-202ENSMUST00000115459 974 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Mmp3P28862 Gm7150-201ENSMUST00000122032 981 ntBASIC12.72□□□□□ -0.37
Mmp3P28862 Gm13205-201ENSMUST00000123548 562 ntTSL 3 BASIC12.72□□□□□ -0.37
Mmp3P28862 Gm13605-201ENSMUST00000124489 658 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Mmp3P28862 Gm8459-201ENSMUST00000162504 760 ntBASIC12.72□□□□□ -0.37
Mmp3P28862 Mocs2-203ENSMUST00000164737 745 ntTSL 3 BASIC12.72□□□□□ -0.37
Mmp3P28862 Kdm4dl-201ENSMUST00000184843 1187 ntBASIC12.72□□□□□ -0.37
Mmp3P28862 Gm9645-201ENSMUST00000197131 792 ntBASIC12.72□□□□□ -0.37
Mmp3P28862 Pgpep1l-202ENSMUST00000207874 677 ntAPPRIS P1 TSL 5 BASIC12.72□□□□□ -0.37
Mmp3P28862 Gm45285-201ENSMUST00000210418 749 ntTSL 3 BASIC12.72□□□□□ -0.37
Mmp3P28862 9430078K24Rik-201ENSMUST00000218818 1082 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Mmp3P28862 Crygs-201ENSMUST00000040592 708 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Retrieved 100 of 76,532 protein–RNA pairs in 56.4 ms