Protein–RNA interactions for Protein: P28660

Nckap1, Nck-associated protein 1, mousemouse

Known RBP Predictions only

Length 1,128 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nckap1P28660 2900026A02Rik-203ENSMUST00000212276 5864 ntAPPRIS ALT2 TSL 5 BASIC11.9□□□□□ -0.5
Nckap1P28660 Sparc-209ENSMUST00000216313 1304 ntAPPRIS ALT2 TSL 5 BASIC11.9□□□□□ -0.5
Nckap1P28660 Srsf5-202ENSMUST00000110351 1498 ntAPPRIS ALT2 TSL 1 (best) BASIC11.9□□□□□ -0.5
Nckap1P28660 Exosc1-202ENSMUST00000112123 1499 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Nckap1P28660 Wnt9a-201ENSMUST00000000128 3320 ntAPPRIS ALT2 TSL 5 BASIC11.9□□□□□ -0.5
Nckap1P28660 Plekha6-204ENSMUST00000187285 5040 ntAPPRIS ALT2 TSL 5 BASIC11.9□□□□□ -0.5
Nckap1P28660 Eps15l1-203ENSMUST00000212121 2686 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Nckap1P28660 Tsc22d4-204ENSMUST00000110983 1043 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Nckap1P28660 Rbfox2-202ENSMUST00000111581 3072 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Nckap1P28660 Snx29-202ENSMUST00000115814 1125 ntTSL 5 BASIC11.9□□□□□ -0.5
Nckap1P28660 Gm14314-201ENSMUST00000118225 1015 ntBASIC11.9□□□□□ -0.5
Nckap1P28660 Gm13888-201ENSMUST00000119148 422 ntBASIC11.9□□□□□ -0.5
Nckap1P28660 Gm12029-201ENSMUST00000120073 832 ntBASIC11.9□□□□□ -0.5
Nckap1P28660 Gm13263-201ENSMUST00000121271 838 ntBASIC11.9□□□□□ -0.5
Nckap1P28660 1300017J02Rik-202ENSMUST00000123530 1874 ntTSL 5 BASIC11.9□□□□□ -0.5
Nckap1P28660 Asb8-202ENSMUST00000123626 1100 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Nckap1P28660 Asb8-203ENSMUST00000123922 1162 ntAPPRIS P1 TSL 3 BASIC11.9□□□□□ -0.5
Nckap1P28660 Sumo3-203ENSMUST00000124024 776 ntTSL 2 BASIC11.9□□□□□ -0.5
Nckap1P28660 Rdh9-203ENSMUST00000136223 1276 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Nckap1P28660 Gm12714-201ENSMUST00000143391 669 ntTSL 3 BASIC11.9□□□□□ -0.5
Nckap1P28660 Gm14291-201ENSMUST00000143645 804 ntTSL 2 BASIC11.9□□□□□ -0.5
Nckap1P28660 Gm3948-201ENSMUST00000147795 421 ntTSL 3 BASIC11.9□□□□□ -0.5
Nckap1P28660 Gm11290-203ENSMUST00000147811 314 ntTSL 5 BASIC11.9□□□□□ -0.5
Nckap1P28660 Gm15881-201ENSMUST00000148792 942 ntBASIC11.9□□□□□ -0.5
Nckap1P28660 F10-205ENSMUST00000152034 1449 ntTSL 5 BASIC11.9□□□□□ -0.5
Nckap1P28660 1700001G11Rik-203ENSMUST00000153646 764 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Nckap1P28660 5730437C11Rik-201ENSMUST00000155540 242 ntTSL 5 BASIC11.9□□□□□ -0.5
Nckap1P28660 Erh-202ENSMUST00000166931 506 ntTSL 2 BASIC11.9□□□□□ -0.5
Nckap1P28660 Ctdspl-202ENSMUST00000172464 798 ntAPPRIS ALT1 TSL 5 BASIC11.9□□□□□ -0.5
Nckap1P28660 Gm8815-201ENSMUST00000173809 620 ntBASIC11.9□□□□□ -0.5
Nckap1P28660 6230400D17Rik-201ENSMUST00000180987 1554 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Nckap1P28660 Gm37695-201ENSMUST00000191765 530 ntTSL 5 BASIC11.9□□□□□ -0.5
Nckap1P28660 Gm37269-201ENSMUST00000193906 1891 ntBASIC11.9□□□□□ -0.5
Nckap1P28660 Mir7686-201ENSMUST00000200604 57 ntBASIC11.9□□□□□ -0.5
Nckap1P28660 Gm21221-201ENSMUST00000202876 1073 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Nckap1P28660 Gm19287-201ENSMUST00000203190 358 ntBASIC11.9□□□□□ -0.5
Nckap1P28660 Pgam2-201ENSMUST00000020768 840 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Nckap1P28660 Gm7395-201ENSMUST00000216059 1045 ntBASIC11.9□□□□□ -0.5
Nckap1P28660 AC101677.2-201ENSMUST00000218733 741 ntTSL 3 BASIC11.9□□□□□ -0.5
Nckap1P28660 Ngdn-201ENSMUST00000022815 1200 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Nckap1P28660 Immp1l-201ENSMUST00000037499 955 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Nckap1P28660 Neu2-201ENSMUST00000070898 1570 ntAPPRIS P3 TSL 1 (best) BASIC11.9□□□□□ -0.5
Nckap1P28660 Gm11938-201ENSMUST00000072306 663 ntAPPRIS P1 BASIC11.9□□□□□ -0.5
Nckap1P28660 Gm5537-201ENSMUST00000091117 1252 ntBASIC11.9□□□□□ -0.5
Nckap1P28660 Btnl2-202ENSMUST00000178562 2563 ntAPPRIS ALT2 TSL 5 BASIC11.9□□□□□ -0.5
Nckap1P28660 Btnl2-201ENSMUST00000025198 2564 ntAPPRIS P2 TSL 1 (best) BASIC11.9□□□□□ -0.5
Nckap1P28660 Mki67-201ENSMUST00000033310 10061 ntAPPRIS P1 TSL 5 BASIC11.9□□□□□ -0.5
Nckap1P28660 Naaa-201ENSMUST00000113102 2414 ntAPPRIS P3 TSL 1 (best) BASIC11.9□□□□□ -0.5
Nckap1P28660 Ebf3-203ENSMUST00000168203 3724 ntAPPRIS ALT1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Nckap1P28660 Hdac5-201ENSMUST00000008999 4269 ntAPPRIS ALT2 TSL 1 (best) BASIC11.9□□□□□ -0.5
Nckap1P28660 Stard5-202ENSMUST00000117410 2832 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Nckap1P28660 Fcna-201ENSMUST00000028307 1374 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Nckap1P28660 Pgm3-201ENSMUST00000070064 2666 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Nckap1P28660 Map7-202ENSMUST00000116259 3831 ntAPPRIS P2 TSL 1 (best) BASIC11.9□□□□□ -0.5
Nckap1P28660 Csf1-202ENSMUST00000118593 3058 ntAPPRIS ALT2 TSL 1 (best) BASIC11.9□□□□□ -0.51
Nckap1P28660 Hexim2-201ENSMUST00000062530 1910 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.51
Nckap1P28660 Vsx1-201ENSMUST00000046095 3791 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.51
Nckap1P28660 Ylpm1-202ENSMUST00000101202 4605 ntAPPRIS ALT2 TSL 5 BASIC11.9□□□□□ -0.51
Nckap1P28660 Tepsin-201ENSMUST00000026442 2752 ntAPPRIS ALT2 TSL 1 (best) BASIC11.9□□□□□ -0.51
Nckap1P28660 Wnt5a-201ENSMUST00000063465 7010 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.51
Nckap1P28660 Steap3-204ENSMUST00000112643 2873 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Nckap1P28660 Lrp12-201ENSMUST00000022916 4109 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Nckap1P28660 Irf6-201ENSMUST00000076521 4113 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Nckap1P28660 Sypl-201ENSMUST00000020885 2019 ntAPPRIS ALT2 TSL 1 (best) BASIC11.89□□□□□ -0.51
Nckap1P28660 Adgrl3-214ENSMUST00000120445 5230 ntTSL 5 BASIC11.89□□□□□ -0.51
Nckap1P28660 Csrnp1-204ENSMUST00000215916 2956 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Nckap1P28660 Cyp2a4-201ENSMUST00000098657 1738 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Nckap1P28660 Psen1-201ENSMUST00000041806 2690 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Nckap1P28660 Trmt1-203ENSMUST00000109767 2138 ntAPPRIS P3 TSL 1 (best) BASIC11.89□□□□□ -0.51
Nckap1P28660 Gm17435-202ENSMUST00000212699 1998 ntBASIC11.89□□□□□ -0.51
Nckap1P28660 Slc14a2-202ENSMUST00000163367 1428 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Nckap1P28660 Gabpb1-204ENSMUST00000103227 2751 ntAPPRIS P3 TSL 1 (best) BASIC11.89□□□□□ -0.51
Nckap1P28660 Capn3-201ENSMUST00000028748 2606 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Nckap1P28660 Sorcs1-201ENSMUST00000072685 4396 ntTSL 5 BASIC11.89□□□□□ -0.51
Nckap1P28660 Zdhhc20-201ENSMUST00000089473 5186 ntAPPRIS P2 TSL 1 (best) BASIC11.89□□□□□ -0.51
Nckap1P28660 Fam160a2-201ENSMUST00000048079 3443 ntAPPRIS ALT2 TSL 1 (best) BASIC11.89□□□□□ -0.51
Nckap1P28660 Fam129a-203ENSMUST00000111875 1296 ntAPPRIS ALT2 TSL 1 (best) BASIC11.89□□□□□ -0.51
Nckap1P28660 Gm15004-201ENSMUST00000119192 630 ntBASIC11.89□□□□□ -0.51
Nckap1P28660 Gm15207-201ENSMUST00000119259 442 ntBASIC11.89□□□□□ -0.51
Nckap1P28660 Gm11831-201ENSMUST00000141538 629 ntTSL 3 BASIC11.89□□□□□ -0.51
Nckap1P28660 Gm16036-201ENSMUST00000150385 1112 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Nckap1P28660 Gm17231-203ENSMUST00000170133 637 ntTSL 3 BASIC11.89□□□□□ -0.51
Nckap1P28660 Gm28694-201ENSMUST00000190681 722 ntTSL 3 BASIC11.89□□□□□ -0.51
Nckap1P28660 4933408A14Rik-201ENSMUST00000199037 729 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Nckap1P28660 1700018A23Rik-201ENSMUST00000201350 398 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Nckap1P28660 Lgals4-207ENSMUST00000208971 1298 ntAPPRIS ALT2 TSL 1 (best) BASIC11.89□□□□□ -0.51
Nckap1P28660 Gm9132-201ENSMUST00000210182 832 ntBASIC11.89□□□□□ -0.51
Nckap1P28660 Cmtm2a-203ENSMUST00000212492 635 ntAPPRIS ALT2 TSL 3 BASIC11.89□□□□□ -0.51
Nckap1P28660 Gm33979-201ENSMUST00000219486 691 ntTSL 5 BASIC11.89□□□□□ -0.51
Nckap1P28660 AC154290.1-201ENSMUST00000223786 1240 ntBASIC11.89□□□□□ -0.51
Nckap1P28660 CT009713.8-202ENSMUST00000224732 385 ntBASIC11.89□□□□□ -0.51
Nckap1P28660 Gm29480-201ENSMUST00000188589 1655 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Nckap1P28660 Patj-201ENSMUST00000030290 2495 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Nckap1P28660 Klhl3-202ENSMUST00000160860 7149 ntAPPRIS P1 TSL 5 BASIC11.89□□□□□ -0.51
Nckap1P28660 Nxf1-201ENSMUST00000010241 2326 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Nckap1P28660 Ccdc159-202ENSMUST00000170304 1519 ntAPPRIS ALT2 TSL 1 (best) BASIC11.89□□□□□ -0.51
Nckap1P28660 Nckipsd-201ENSMUST00000035218 3360 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Nckap1P28660 Slc16a1-201ENSMUST00000046212 4426 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Nckap1P28660 Fgd3-203ENSMUST00000110087 4698 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Nckap1P28660 Dlk1-201ENSMUST00000056110 4653 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Retrieved 100 of 76,532 protein–RNA pairs in 42.6 ms