Protein–RNA interactions for Protein: P28481

Col2a1, Collagen alpha-1(II) chain, mousemouse

Predictions only

Length 1,487 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col2a1P28481 Uba52-201ENSMUST00000081940 541 ntAPPRIS P1 TSL 2 BASIC13.37□□□□□ -0.27
Col2a1P28481 Olfr1163-201ENSMUST00000099835 1043 ntAPPRIS P1 BASIC13.37□□□□□ -0.27
Col2a1P28481 Brd2-203ENSMUST00000114242 4483 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Col2a1P28481 Hcn3-201ENSMUST00000029686 4002 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Col2a1P28481 Zfp365-201ENSMUST00000064656 4259 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Col2a1P28481 Dmtn-201ENSMUST00000022694 5418 ntAPPRIS ALT1 TSL 5 BASIC13.37□□□□□ -0.27
Col2a1P28481 Svopl-202ENSMUST00000096040 2366 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Col2a1P28481 1700047I17Rik2-201ENSMUST00000177978 3863 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Col2a1P28481 Scarf1-201ENSMUST00000042808 2887 ntAPPRIS P2 TSL 1 (best) BASIC13.37□□□□□ -0.27
Col2a1P28481 BC048403-201ENSMUST00000065600 3123 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Col2a1P28481 Pdcd4-202ENSMUST00000074371 2418 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Col2a1P28481 Fancc-217ENSMUST00000163091 2995 ntAPPRIS ALT2 TSL 5 BASIC13.37□□□□□ -0.27
Col2a1P28481 Ttc8-201ENSMUST00000079146 2270 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Col2a1P28481 Tubgcp3-201ENSMUST00000000776 3797 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Col2a1P28481 Slc16a2-201ENSMUST00000042664 4152 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Col2a1P28481 Cask-203ENSMUST00000115436 8260 ntAPPRIS P1 TSL 2 BASIC13.37□□□□□ -0.27
Col2a1P28481 Slc24a5-201ENSMUST00000070353 1954 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Col2a1P28481 Gm15412-201ENSMUST00000137193 1096 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Col2a1P28481 Gm29164-201ENSMUST00000185454 1024 ntBASIC13.36□□□□□ -0.27
Col2a1P28481 4930422M22Rik-201ENSMUST00000191492 948 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Col2a1P28481 Gm4811-201ENSMUST00000220879 1220 ntBASIC13.36□□□□□ -0.27
Col2a1P28481 Cmtm2a-201ENSMUST00000034344 1081 ntAPPRIS P2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Col2a1P28481 Gm2174-201ENSMUST00000079663 402 ntAPPRIS P1 BASIC13.36□□□□□ -0.27
Col2a1P28481 Aldoart2-201ENSMUST00000080123 1658 ntAPPRIS P1 BASIC13.36□□□□□ -0.27
Col2a1P28481 Cnot10-201ENSMUST00000070117 2853 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Col2a1P28481 Map10-201ENSMUST00000053078 3542 ntAPPRIS P1 BASIC13.36□□□□□ -0.27
Col2a1P28481 Cdh11-201ENSMUST00000075190 5647 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Col2a1P28481 Zufsp-201ENSMUST00000048222 2991 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Col2a1P28481 Col5a3-201ENSMUST00000004201 6119 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Col2a1P28481 Gm26841-201ENSMUST00000180725 1787 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Col2a1P28481 Fbxo25-204ENSMUST00000209913 2035 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Col2a1P28481 Wnt9a-201ENSMUST00000000128 3320 ntAPPRIS ALT2 TSL 5 BASIC13.36□□□□□ -0.27
Col2a1P28481 Tmppe-201ENSMUST00000111820 2921 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Col2a1P28481 Ttc17-202ENSMUST00000094801 3408 ntTSL 5 BASIC13.36□□□□□ -0.27
Col2a1P28481 Ecsit-203ENSMUST00000179422 1462 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Col2a1P28481 Platr25-207ENSMUST00000222477 1705 ntTSL 5 BASIC13.36□□□□□ -0.27
Col2a1P28481 Trmt1l-201ENSMUST00000065625 2749 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Col2a1P28481 Camk2b-207ENSMUST00000101586 1590 ntTSL 5 BASIC13.36□□□□□ -0.27
Col2a1P28481 Gm37122-201ENSMUST00000195313 1567 ntBASIC13.36□□□□□ -0.27
Col2a1P28481 Prrt3-201ENSMUST00000101059 3304 ntAPPRIS P3 TSL 1 (best) BASIC13.36□□□□□ -0.27
Col2a1P28481 Tmem30a-201ENSMUST00000034878 3658 ntAPPRIS P2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Col2a1P28481 Gm45003-201ENSMUST00000205875 2158 ntBASIC13.36□□□□□ -0.27
Col2a1P28481 Gabarapl2-201ENSMUST00000034428 1677 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Col2a1P28481 Gm39168-201ENSMUST00000210181 1423 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Col2a1P28481 Zc3h12a-201ENSMUST00000036188 2755 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Col2a1P28481 Trim46-201ENSMUST00000041022 3122 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Col2a1P28481 Fgd2-201ENSMUST00000024810 2612 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Col2a1P28481 Pttg1-203ENSMUST00000101340 700 ntAPPRIS P1 TSL 5 BASIC13.36□□□□□ -0.27
Col2a1P28481 Trpm2-201ENSMUST00000105399 731 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Col2a1P28481 Pttg1-205ENSMUST00000118368 696 ntAPPRIS P1 TSL 5 BASIC13.36□□□□□ -0.27
Col2a1P28481 Gm15329-201ENSMUST00000121408 155 ntBASIC13.36□□□□□ -0.27
Col2a1P28481 Gm10169-201ENSMUST00000121822 348 ntBASIC13.36□□□□□ -0.27
Col2a1P28481 Gm21972-201ENSMUST00000135197 776 ntAPPRIS P1 TSL 3 BASIC13.36□□□□□ -0.27
Col2a1P28481 Gm29410-201ENSMUST00000188383 694 ntBASIC13.36□□□□□ -0.27
Col2a1P28481 Gm42816-201ENSMUST00000198433 325 ntBASIC13.36□□□□□ -0.27
Col2a1P28481 Gm43966-201ENSMUST00000203301 612 ntBASIC13.36□□□□□ -0.27
Col2a1P28481 Hrc-202ENSMUST00000211327 607 ntTSL 5 BASIC13.36□□□□□ -0.27
Col2a1P28481 1700026F02Rik-203ENSMUST00000211950 1082 ntTSL 5 BASIC13.36□□□□□ -0.27
Col2a1P28481 Gm3028-201ENSMUST00000213805 1119 ntBASIC13.36□□□□□ -0.27
Col2a1P28481 Gm34973-201ENSMUST00000217087 572 ntTSL 3 BASIC13.36□□□□□ -0.27
Col2a1P28481 Gm5468-202ENSMUST00000227851 682 ntBASIC13.36□□□□□ -0.27
Col2a1P28481 Prg2-201ENSMUST00000028467 838 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Col2a1P28481 Cad-206ENSMUST00000201838 3153 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Col2a1P28481 Gm13553-201ENSMUST00000133025 1970 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Col2a1P28481 5530401A14Rik-201ENSMUST00000021044 1836 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Col2a1P28481 Nfkb2-202ENSMUST00000111881 3205 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Col2a1P28481 Sox17-206ENSMUST00000192650 3242 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Col2a1P28481 March7-203ENSMUST00000102748 3594 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Col2a1P28481 Adgrb2-202ENSMUST00000097868 4635 ntAPPRIS ALT2 TSL 5 BASIC13.35□□□□□ -0.27
Col2a1P28481 Thrap3-201ENSMUST00000080919 4378 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Col2a1P28481 Clec4a3-201ENSMUST00000088468 1300 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Col2a1P28481 Fcgr1-201ENSMUST00000029748 2589 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Col2a1P28481 Eif4g1-205ENSMUST00000115461 5507 ntAPPRIS ALT2 TSL 5 BASIC13.35□□□□□ -0.27
Col2a1P28481 Gjb2-201ENSMUST00000055698 2406 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Col2a1P28481 5930412G12Rik-201ENSMUST00000091324 2403 ntTSL 5 BASIC13.35□□□□□ -0.27
Col2a1P28481 Nif3l1-206ENSMUST00000171597 2098 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Col2a1P28481 Nrg1-211ENSMUST00000208497 2096 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Col2a1P28481 Pbx1-208ENSMUST00000188912 3970 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Col2a1P28481 Ppp1r18-203ENSMUST00000127442 3524 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
Col2a1P28481 Gadl1-202ENSMUST00000119291 1729 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
Col2a1P28481 Olfr1267-ps1-201ENSMUST00000118957 930 ntAPPRIS P1 BASIC13.35□□□□□ -0.27
Col2a1P28481 Gm12274-201ENSMUST00000120062 385 ntBASIC13.35□□□□□ -0.27
Col2a1P28481 Gm12030-201ENSMUST00000121917 223 ntBASIC13.35□□□□□ -0.27
Col2a1P28481 Nop56-204ENSMUST00000136621 868 ntTSL 5 BASIC13.35□□□□□ -0.27
Col2a1P28481 Gm38389-201ENSMUST00000147871 653 ntTSL 3 BASIC13.35□□□□□ -0.27
Col2a1P28481 Gm25554-201ENSMUST00000158075 113 ntBASIC13.35□□□□□ -0.27
Col2a1P28481 Gm3329-201ENSMUST00000159873 556 ntBASIC13.35□□□□□ -0.27
Col2a1P28481 Mocs2-205ENSMUST00000165022 962 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Col2a1P28481 Olfr755-ps1-201ENSMUST00000173568 910 ntBASIC13.35□□□□□ -0.27
Col2a1P28481 Mir7051-201ENSMUST00000184167 73 ntBASIC13.35□□□□□ -0.27
Col2a1P28481 Gm37028-201ENSMUST00000194276 107 ntBASIC13.35□□□□□ -0.27
Col2a1P28481 Gm43163-201ENSMUST00000196571 442 ntBASIC13.35□□□□□ -0.27
Col2a1P28481 Gm3017-201ENSMUST00000203603 1126 ntBASIC13.35□□□□□ -0.27
Col2a1P28481 Gm44759-201ENSMUST00000206057 430 ntTSL 3 BASIC13.35□□□□□ -0.27
Col2a1P28481 Gm45592-201ENSMUST00000209605 1043 ntBASIC13.35□□□□□ -0.27
Col2a1P28481 Ly6i-201ENSMUST00000023250 1156 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Col2a1P28481 Gm10135-201ENSMUST00000043711 252 ntAPPRIS P1 TSL 5 BASIC13.35□□□□□ -0.27
Col2a1P28481 Hyal3-202ENSMUST00000148440 1380 ntAPPRIS P1 TSL 5 BASIC13.35□□□□□ -0.27
Col2a1P28481 Ncs1-201ENSMUST00000000199 4653 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Col2a1P28481 AC158636.1-201ENSMUST00000220118 1393 ntBASIC13.35□□□□□ -0.27
Retrieved 100 of 76,532 protein–RNA pairs in 30.2 ms