Protein–RNA interactions for Protein: P23463

Hoxd8, Homeobox protein Hox-D8, mousemouse

Predictions only

Length 289 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxd8P23463 Clrn1-201ENSMUST00000051408 1204 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Hoxd8P23463 Olfr284-201ENSMUST00000063289 918 ntAPPRIS P1 BASIC12.35□□□□□ -0.43
Hoxd8P23463 Abhd14b-207ENSMUST00000213179 1627 ntAPPRIS P1 TSL 2 BASIC12.35□□□□□ -0.43
Hoxd8P23463 Ckmt1-201ENSMUST00000000317 1620 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Hoxd8P23463 Vmac-202ENSMUST00000164907 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Hoxd8P23463 Tcf12-202ENSMUST00000183404 6299 ntAPPRIS P3 TSL 1 (best) BASIC12.35□□□□□ -0.43
Hoxd8P23463 Chd4-203ENSMUST00000112392 6652 ntAPPRIS ALT2 TSL 5 BASIC12.35□□□□□ -0.43
Hoxd8P23463 Slc8a2-202ENSMUST00000211649 5261 ntAPPRIS P3 TSL 1 (best) BASIC12.35□□□□□ -0.43
Hoxd8P23463 Spert-203ENSMUST00000165569 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Hoxd8P23463 Lrrc74b-202ENSMUST00000065125 1539 ntTSL 2 BASIC12.35□□□□□ -0.43
Hoxd8P23463 Zyx-202ENSMUST00000164375 3188 ntAPPRIS P3 TSL 1 (best) BASIC12.35□□□□□ -0.43
Hoxd8P23463 Zfp777-201ENSMUST00000095944 3184 ntAPPRIS ALT2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Hoxd8P23463 2900089D17Rik-201ENSMUST00000124015 2475 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Hoxd8P23463 Cenpo-201ENSMUST00000020981 2037 ntAPPRIS ALT2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Hoxd8P23463 Naa50-201ENSMUST00000063520 3557 ntAPPRIS P3 TSL 1 (best) BASIC12.35□□□□□ -0.43
Hoxd8P23463 Szrd1-203ENSMUST00000102487 3244 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Hoxd8P23463 C130026I21Rik-202ENSMUST00000093506 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Hoxd8P23463 Gatad2a-206ENSMUST00000212478 3622 ntAPPRIS ALT2 TSL 5 BASIC12.35□□□□□ -0.43
Hoxd8P23463 Ywhab-201ENSMUST00000018470 3013 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Hoxd8P23463 Hipk4-201ENSMUST00000037134 2926 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Hoxd8P23463 Asl-202ENSMUST00000159619 2088 ntAPPRIS P1 TSL 5 BASIC12.34□□□□□ -0.43
Hoxd8P23463 Nphp4-202ENSMUST00000081393 5027 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Hoxd8P23463 Magee1-201ENSMUST00000033578 3550 ntAPPRIS P1 BASIC12.34□□□□□ -0.43
Hoxd8P23463 Eif3j1-201ENSMUST00000028668 5413 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Hoxd8P23463 Klhl26-201ENSMUST00000066597 2991 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Hoxd8P23463 Mgme1-202ENSMUST00000110027 2359 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Hoxd8P23463 Adora1-201ENSMUST00000038191 3625 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Hoxd8P23463 Hmx2-201ENSMUST00000051997 3102 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Hoxd8P23463 Tsku-203ENSMUST00000165257 2514 ntAPPRIS P1 TSL 2 BASIC12.34□□□□□ -0.43
Hoxd8P23463 Eaf1-201ENSMUST00000022446 4918 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Hoxd8P23463 Gm20815-201ENSMUST00000115496 1224 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Hoxd8P23463 9430093N23Rik-201ENSMUST00000152494 515 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Hoxd8P23463 Gm22442-201ENSMUST00000157256 144 ntBASIC12.34□□□□□ -0.43
Hoxd8P23463 Fhit-201ENSMUST00000160340 1094 ntTSL 5 BASIC12.34□□□□□ -0.43
Hoxd8P23463 Spdye4c-203ENSMUST00000178601 1020 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Hoxd8P23463 Fhit-208ENSMUST00000179394 453 ntAPPRIS P1 TSL 5 BASIC12.34□□□□□ -0.43
Hoxd8P23463 2610316D01Rik-201ENSMUST00000181047 924 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Hoxd8P23463 Mir6998-201ENSMUST00000183343 64 ntBASIC12.34□□□□□ -0.43
Hoxd8P23463 Gm21812-202ENSMUST00000188908 1224 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Hoxd8P23463 Gm29233-201ENSMUST00000190311 281 ntTSL 5 BASIC12.34□□□□□ -0.43
Hoxd8P23463 Gm42919-201ENSMUST00000197753 1284 ntBASIC12.34□□□□□ -0.43
Hoxd8P23463 Pmvk-204ENSMUST00000198440 978 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Hoxd8P23463 CT025553.1-201ENSMUST00000226292 299 ntBASIC12.34□□□□□ -0.43
Hoxd8P23463 BC030499-201ENSMUST00000046361 959 ntAPPRIS P1 TSL 5 BASIC12.34□□□□□ -0.43
Hoxd8P23463 Tbca-201ENSMUST00000046644 559 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Hoxd8P23463 Snx14-207ENSMUST00000174806 3082 ntAPPRIS ALT2 TSL 5 BASIC12.34□□□□□ -0.43
Hoxd8P23463 Hpgd-201ENSMUST00000034026 1683 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Hoxd8P23463 Foxred2-201ENSMUST00000016696 4793 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Hoxd8P23463 Slc19a1-209ENSMUST00000144234 2309 ntAPPRIS P2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Hoxd8P23463 Nubp2-201ENSMUST00000044252 1430 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Hoxd8P23463 Eprs-201ENSMUST00000046514 4906 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Hoxd8P23463 Myf5-201ENSMUST00000000445 2083 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Hoxd8P23463 Hdgfl2-210ENSMUST00000225843 2238 ntAPPRIS ALT2 BASIC12.34□□□□□ -0.43
Hoxd8P23463 Pak6-202ENSMUST00000110853 3677 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Hoxd8P23463 Acin1-201ENSMUST00000022793 4735 ntAPPRIS P3 TSL 1 (best) BASIC12.34□□□□□ -0.43
Hoxd8P23463 Osr2-204ENSMUST00000228152 1324 ntAPPRIS P1 BASIC12.34□□□□□ -0.43
Hoxd8P23463 Mkl1-209ENSMUST00000149582 4366 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Hoxd8P23463 Pxylp1-201ENSMUST00000078478 2908 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Hoxd8P23463 Zfyve27-207ENSMUST00000169536 5611 ntAPPRIS P3 TSL 1 (best) BASIC12.34□□□□□ -0.43
Hoxd8P23463 Luc7l3-209ENSMUST00000166312 5244 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Hoxd8P23463 Slc34a1-201ENSMUST00000057167 2433 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.43
Hoxd8P23463 Mcm8-202ENSMUST00000066559 3397 ntAPPRIS P3 TSL 1 (best) BASIC12.33□□□□□ -0.43
Hoxd8P23463 2610001J05Rik-203ENSMUST00000185219 1606 ntAPPRIS P1 BASIC12.33□□□□□ -0.43
Hoxd8P23463 Chfr-201ENSMUST00000014812 3146 ntAPPRIS P3 TSL 1 (best) BASIC12.33□□□□□ -0.44
Hoxd8P23463 Olfr222-203ENSMUST00000215339 2166 ntAPPRIS P1 TSL 5 BASIC12.33□□□□□ -0.44
Hoxd8P23463 Dis3l-203ENSMUST00000120760 3661 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Hoxd8P23463 Serpina1b-203ENSMUST00000186166 1762 ntAPPRIS P1 TSL 5 BASIC12.33□□□□□ -0.44
Hoxd8P23463 Hectd2-208ENSMUST00000169036 3842 ntAPPRIS ALT1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Hoxd8P23463 Zeb2-202ENSMUST00000068415 5624 ntAPPRIS P2 TSL 1 (best) BASIC12.33□□□□□ -0.44
Hoxd8P23463 F10-201ENSMUST00000033821 1903 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.44
Hoxd8P23463 Ptp4a3-204ENSMUST00000167582 2640 ntTSL 5 BASIC12.33□□□□□ -0.44
Hoxd8P23463 Acsf3-202ENSMUST00000212781 2604 ntAPPRIS ALT2 TSL 2 BASIC12.33□□□□□ -0.44
Hoxd8P23463 Zscan22-201ENSMUST00000055528 2620 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Hoxd8P23463 Fetub-204ENSMUST00000170805 1508 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Hoxd8P23463 F2-202ENSMUST00000111335 1969 ntAPPRIS ALT2 TSL 5 BASIC12.33□□□□□ -0.44
Hoxd8P23463 Nppa-201ENSMUST00000103230 865 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Hoxd8P23463 A230006K03Rik-201ENSMUST00000107533 977 ntTSL 5 BASIC12.33□□□□□ -0.44
Hoxd8P23463 Gm9089-201ENSMUST00000122027 526 ntBASIC12.33□□□□□ -0.44
Hoxd8P23463 Cdpf1-205ENSMUST00000150995 566 ntAPPRIS P1 TSL 3 BASIC12.33□□□□□ -0.44
Hoxd8P23463 Gm10320-201ENSMUST00000170205 527 ntAPPRIS P1 TSL 5 BASIC12.33□□□□□ -0.44
Hoxd8P23463 Agtpbp1-219ENSMUST00000170378 653 ntTSL 3 BASIC12.33□□□□□ -0.44
Hoxd8P23463 Ap1g1-206ENSMUST00000179104 1096 ntBASIC12.33□□□□□ -0.44
Hoxd8P23463 Gm7137-201ENSMUST00000180161 711 ntAPPRIS P1 BASIC12.33□□□□□ -0.44
Hoxd8P23463 Gm19744-202ENSMUST00000186135 948 ntTSL 5 BASIC12.33□□□□□ -0.44
Hoxd8P23463 2610027F03Rik-202ENSMUST00000186982 603 ntTSL 5 BASIC12.33□□□□□ -0.44
Hoxd8P23463 Gm42657-201ENSMUST00000201746 211 ntBASIC12.33□□□□□ -0.44
Hoxd8P23463 A930002H02Rik-201ENSMUST00000208672 1178 ntBASIC12.33□□□□□ -0.44
Hoxd8P23463 Folr2-203ENSMUST00000210598 1204 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Hoxd8P23463 Gm45460-201ENSMUST00000211385 1038 ntTSL 5 BASIC12.33□□□□□ -0.44
Hoxd8P23463 AC164105.2-201ENSMUST00000215484 524 ntTSL 5 BASIC12.33□□□□□ -0.44
Hoxd8P23463 CT009546.1-201ENSMUST00000222573 1120 ntBASIC12.33□□□□□ -0.44
Hoxd8P23463 Mirlet7i-201ENSMUST00000083472 85 ntBASIC12.33□□□□□ -0.44
Hoxd8P23463 Gm28551-201ENSMUST00000144660 3142 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Hoxd8P23463 Phldb1-214ENSMUST00000147495 5424 ntAPPRIS P5 TSL 5 BASIC12.33□□□□□ -0.44
Hoxd8P23463 Tpr-203ENSMUST00000124973 7430 ntAPPRIS P2 TSL 1 (best) BASIC12.33□□□□□ -0.44
Hoxd8P23463 Gm2916-202ENSMUST00000181779 1702 ntAPPRIS P1 TSL 5 BASIC12.33□□□□□ -0.44
Hoxd8P23463 Opa1-206ENSMUST00000160597 6230 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Hoxd8P23463 Zfyve28-201ENSMUST00000094868 3983 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Hoxd8P23463 Diaph3-202ENSMUST00000168889 4582 ntAPPRIS P2 TSL 1 (best) BASIC12.33□□□□□ -0.44
Hoxd8P23463 Diaph3-201ENSMUST00000022599 4582 ntAPPRIS ALT2 TSL 5 BASIC12.33□□□□□ -0.44
Retrieved 100 of 76,532 protein–RNA pairs in 31 ms