Protein–RNA interactions for Protein: P10855

Ccl3, C-C motif chemokine 3, mousemouse

Predictions only

Length 92 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccl3P10855 Mpped1-203ENSMUST00000109470 3281 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Ccl3P10855 Glo1-201ENSMUST00000024823 1935 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Ccl3P10855 Spdye4a-203ENSMUST00000195900 1496 ntAPPRIS ALT2 TSL 5 BASIC10.51□□□□□ -0.73
Ccl3P10855 Mob1a-202ENSMUST00000055261 4412 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Ccl3P10855 Gabpb1-205ENSMUST00000110424 2613 ntAPPRIS P3 TSL 1 (best) BASIC10.51□□□□□ -0.73
Ccl3P10855 Tcea3-201ENSMUST00000102533 1251 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Ccl3P10855 Gm5150-201ENSMUST00000108347 913 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Ccl3P10855 Gad1-207ENSMUST00000148210 1021 ntTSL 5 BASIC10.51□□□□□ -0.73
Ccl3P10855 Snhg17-205ENSMUST00000151331 529 ntTSL 2 BASIC10.51□□□□□ -0.73
Ccl3P10855 Gm10320-201ENSMUST00000170205 527 ntAPPRIS P1 TSL 5 BASIC10.51□□□□□ -0.73
Ccl3P10855 Pfdn6-202ENSMUST00000173363 871 ntTSL 2 BASIC10.51□□□□□ -0.73
Ccl3P10855 Mir6407-201ENSMUST00000184510 101 ntBASIC10.51□□□□□ -0.73
Ccl3P10855 Gm37800-202ENSMUST00000193667 553 ntTSL 3 BASIC10.51□□□□□ -0.73
Ccl3P10855 Fxyd4-202ENSMUST00000203066 522 ntTSL 3 BASIC10.51□□□□□ -0.73
Ccl3P10855 Gm11149-203ENSMUST00000215465 805 ntTSL 1 (best) BASIC10.51□□□□□ -0.73
Ccl3P10855 Gm3619-201ENSMUST00000219947 775 ntBASIC10.51□□□□□ -0.73
Ccl3P10855 1700012P22Rik-201ENSMUST00000030323 974 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Ccl3P10855 Rpl35a-201ENSMUST00000078804 491 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Ccl3P10855 Rnf183-201ENSMUST00000079420 573 ntAPPRIS P1 BASIC10.51□□□□□ -0.73
Ccl3P10855 Ifitm2-201ENSMUST00000081649 655 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Ccl3P10855 Lrig2-201ENSMUST00000046316 7099 ntAPPRIS P3 TSL 1 (best) BASIC10.51□□□□□ -0.73
Ccl3P10855 Sufu-201ENSMUST00000039922 4522 ntAPPRIS P3 TSL 1 (best) BASIC10.51□□□□□ -0.73
Ccl3P10855 Pcsk7-201ENSMUST00000039059 3876 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Ccl3P10855 Ap2a1-203ENSMUST00000166972 3449 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Ccl3P10855 Srr-203ENSMUST00000108448 3239 ntAPPRIS P1 TSL 5 BASIC10.51□□□□□ -0.73
Ccl3P10855 Mxd3-201ENSMUST00000021941 1327 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Ccl3P10855 Hvcn1-201ENSMUST00000072602 2790 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Ccl3P10855 Bcl7a-201ENSMUST00000031391 4718 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Ccl3P10855 Syn1-202ENSMUST00000115345 3261 ntAPPRIS ALT2 TSL 1 (best) BASIC10.51□□□□□ -0.73
Ccl3P10855 Gm5780-201ENSMUST00000217774 1834 ntBASIC10.51□□□□□ -0.73
Ccl3P10855 Taf6-202ENSMUST00000110936 2308 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Ccl3P10855 Klhl8-202ENSMUST00000112811 2577 ntTSL 5 BASIC10.51□□□□□ -0.73
Ccl3P10855 Sertad2-203ENSMUST00000109586 5515 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Ccl3P10855 Zfp862-ps-204ENSMUST00000204484 6065 ntTSL 1 (best) BASIC10.51□□□□□ -0.73
Ccl3P10855 Iqsec3-203ENSMUST00000151397 8067 ntTSL 2 BASIC10.51□□□□□ -0.73
Ccl3P10855 Col22a1-202ENSMUST00000159993 8809 ntAPPRIS P1 TSL 5 BASIC10.51□□□□□ -0.73
Ccl3P10855 Rufy2-203ENSMUST00000122231 2664 ntTSL 5 BASIC10.51□□□□□ -0.73
Ccl3P10855 Sipa1l3-207ENSMUST00000182484 2420 ntTSL 5 BASIC10.5□□□□□ -0.73
Ccl3P10855 Dclk1-215ENSMUST00000200352 1662 ntTSL 2 BASIC10.5□□□□□ -0.73
Ccl3P10855 Gm7278-201ENSMUST00000119836 1401 ntBASIC10.5□□□□□ -0.73
Ccl3P10855 Eef1akmt3-201ENSMUST00000116231 2719 ntAPPRIS P1 TSL 5 BASIC10.5□□□□□ -0.73
Ccl3P10855 Twistnb-201ENSMUST00000020877 4325 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
Ccl3P10855 Comt-204ENSMUST00000165430 1978 ntAPPRIS P1 TSL 5 BASIC10.5□□□□□ -0.73
Ccl3P10855 Ephx1-201ENSMUST00000036928 1741 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
Ccl3P10855 Dgkz-203ENSMUST00000111303 4169 ntTSL 1 (best) BASIC10.5□□□□□ -0.73
Ccl3P10855 Fam53c-201ENSMUST00000049281 4475 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
Ccl3P10855 5930430L01Rik-201ENSMUST00000145042 3994 ntTSL 1 (best) BASIC10.5□□□□□ -0.73
Ccl3P10855 Cfap100-207ENSMUST00000165673 2072 ntAPPRIS P2 TSL 5 BASIC10.5□□□□□ -0.73
Ccl3P10855 Zfp433-202ENSMUST00000200889 2384 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
Ccl3P10855 Gm32687-201ENSMUST00000220314 2379 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
Ccl3P10855 Gm12198-201ENSMUST00000154068 1809 ntTSL 1 (best) BASIC10.5□□□□□ -0.73
Ccl3P10855 5530401A14Rik-201ENSMUST00000021044 1836 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
Ccl3P10855 Esr1-204ENSMUST00000105590 6339 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
Ccl3P10855 Ifna2-201ENSMUST00000105147 1032 ntAPPRIS P1 BASIC10.5□□□□□ -0.73
Ccl3P10855 Ptges3l-203ENSMUST00000107252 853 ntAPPRIS ALT2 TSL 1 (best) BASIC10.5□□□□□ -0.73
Ccl3P10855 Polr2i-203ENSMUST00000108193 488 ntTSL 3 BASIC10.5□□□□□ -0.73
Ccl3P10855 Vbp1-202ENSMUST00000114070 632 ntTSL 1 (best) BASIC10.5□□□□□ -0.73
Ccl3P10855 Rbm3-205ENSMUST00000115619 969 ntAPPRIS ALT1 TSL 3 BASIC10.5□□□□□ -0.73
Ccl3P10855 n-R5s84-201ENSMUST00000122591 109 ntBASIC10.5□□□□□ -0.73
Ccl3P10855 E130307A14Rik-203ENSMUST00000136862 608 ntTSL 3 BASIC10.5□□□□□ -0.73
Ccl3P10855 9430093N23Rik-201ENSMUST00000152494 515 ntTSL 1 (best) BASIC10.5□□□□□ -0.73
Ccl3P10855 Gzmc-201ENSMUST00000015585 894 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
Ccl3P10855 Gm26047-201ENSMUST00000157308 113 ntBASIC10.5□□□□□ -0.73
Ccl3P10855 Gm9192-201ENSMUST00000183221 985 ntBASIC10.5□□□□□ -0.73
Ccl3P10855 Gm29560-201ENSMUST00000191526 881 ntTSL 5 BASIC10.5□□□□□ -0.73
Ccl3P10855 Gm26047-202ENSMUST00000198840 115 ntBASIC10.5□□□□□ -0.73
Ccl3P10855 AC164105.2-201ENSMUST00000215484 524 ntTSL 5 BASIC10.5□□□□□ -0.73
Ccl3P10855 AC165154.1-201ENSMUST00000226661 340 ntBASIC10.5□□□□□ -0.73
Ccl3P10855 Them5-201ENSMUST00000029794 1251 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
Ccl3P10855 Mgp-201ENSMUST00000032342 617 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
Ccl3P10855 Arhgap4-204ENSMUST00000114406 2749 ntTSL 1 (best) BASIC10.5□□□□□ -0.73
Ccl3P10855 Bicd1-202ENSMUST00000086829 9667 ntAPPRIS P2 TSL 1 (best) BASIC10.5□□□□□ -0.73
Ccl3P10855 Map3k9-202ENSMUST00000222322 3303 ntAPPRIS ALT2 TSL 5 BASIC10.5□□□□□ -0.73
Ccl3P10855 Spata7-203ENSMUST00000101146 1913 ntTSL 1 (best) BASIC10.5□□□□□ -0.73
Ccl3P10855 Gba-202ENSMUST00000167998 1938 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
Ccl3P10855 Mmp19-203ENSMUST00000219404 2236 ntAPPRIS ALT2 TSL 1 (best) BASIC10.5□□□□□ -0.73
Ccl3P10855 Pabpc2-201ENSMUST00000063219 2586 ntAPPRIS P1 BASIC10.5□□□□□ -0.73
Ccl3P10855 Zfp593-201ENSMUST00000030644 1994 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
Ccl3P10855 Cyp8b1-201ENSMUST00000062474 1950 ntAPPRIS P1 BASIC10.5□□□□□ -0.73
Ccl3P10855 Abi2-205ENSMUST00000187709 1671 ntAPPRIS P1 TSL 5 BASIC10.5□□□□□ -0.73
Ccl3P10855 Dpp6-201ENSMUST00000071500 3826 ntAPPRIS P3 TSL 1 (best) BASIC10.5□□□□□ -0.73
Ccl3P10855 Evx1os-201ENSMUST00000125305 2916 ntTSL 1 (best) BASIC10.5□□□□□ -0.73
Ccl3P10855 Trpm1-221ENSMUST00000206706 2350 ntTSL 1 (best) BASIC10.5□□□□□ -0.73
Ccl3P10855 Ctr9-201ENSMUST00000005749 4300 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Ccl3P10855 Tmc8-204ENSMUST00000119455 2736 ntAPPRIS ALT2 TSL 1 (best) BASIC10.49□□□□□ -0.73
Ccl3P10855 Ext1-201ENSMUST00000077273 7663 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Ccl3P10855 Zfp783-204ENSMUST00000130490 4419 ntTSL 1 (best) BASIC10.49□□□□□ -0.73
Ccl3P10855 Gm15774-201ENSMUST00000141810 2176 ntTSL 5 BASIC10.49□□□□□ -0.73
Ccl3P10855 Cadm2-202ENSMUST00000120594 3248 ntAPPRIS ALT1 TSL 5 BASIC10.49□□□□□ -0.73
Ccl3P10855 Fn1-213ENSMUST00000188674 7680 ntAPPRIS ALT2 TSL 1 (best) BASIC10.49□□□□□ -0.73
Ccl3P10855 Fn1-217ENSMUST00000190780 7694 ntAPPRIS ALT2 TSL 1 (best) BASIC10.49□□□□□ -0.73
Ccl3P10855 Scube1-203ENSMUST00000076060 3913 ntAPPRIS ALT2 TSL 1 (best) BASIC10.49□□□□□ -0.73
Ccl3P10855 Chit1-203ENSMUST00000160060 1580 ntTSL 1 (best) BASIC10.49□□□□□ -0.73
Ccl3P10855 Spock3-201ENSMUST00000093480 3024 ntAPPRIS P3 TSL 5 BASIC10.49□□□□□ -0.73
Ccl3P10855 Map1b-203ENSMUST00000223725 2669 ntBASIC10.49□□□□□ -0.73
Ccl3P10855 Adra1a-206ENSMUST00000225182 2337 ntBASIC10.49□□□□□ -0.73
Ccl3P10855 Prkca-201ENSMUST00000059595 8409 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Ccl3P10855 Tbrg1-201ENSMUST00000117654 1984 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Ccl3P10855 Rad9b-201ENSMUST00000049009 1631 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Ccl3P10855 Gm10479-201ENSMUST00000101568 318 ntAPPRIS P1 TSL 5 BASIC10.49□□□□□ -0.73
Retrieved 100 of 76,532 protein–RNA pairs in 51 ms