Protein–RNA interactions for Protein: P09225

Lta, Lymphotoxin-alpha, mousemouse

Predictions only

Length 202 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LtaP09225 Gm16907-201ENSMUST00000180734 2317 ntTSL 1 (best) BASIC9.77□□□□□ -0.85
LtaP09225 Uprt-201ENSMUST00000087867 2304 ntAPPRIS P1 TSL 1 (best) BASIC9.77□□□□□ -0.85
LtaP09225 Ntrk2-202ENSMUST00000109838 6846 ntTSL 1 (best) BASIC9.77□□□□□ -0.85
LtaP09225 Fam177a-201ENSMUST00000177768 3922 ntAPPRIS P1 TSL 1 (best) BASIC9.77□□□□□ -0.85
LtaP09225 Kdm4d-201ENSMUST00000058796 2695 ntAPPRIS P1 TSL 1 (best) BASIC9.77□□□□□ -0.85
LtaP09225 Ivns1abp-202ENSMUST00000097543 3337 ntTSL 1 (best) BASIC9.77□□□□□ -0.85
LtaP09225 Csrnp2-201ENSMUST00000061457 4126 ntAPPRIS P1 TSL 1 (best) BASIC9.77□□□□□ -0.85
LtaP09225 F11-201ENSMUST00000034064 2240 ntAPPRIS P1 TSL 1 (best) BASIC9.77□□□□□ -0.85
LtaP09225 Prr15l-203ENSMUST00000107633 930 ntAPPRIS P1 TSL 2 BASIC9.77□□□□□ -0.85
LtaP09225 Rpl36-ps10-201ENSMUST00000117431 216 ntBASIC9.77□□□□□ -0.85
LtaP09225 Gm15711-201ENSMUST00000118889 535 ntBASIC9.77□□□□□ -0.85
LtaP09225 Gm5419-201ENSMUST00000119301 527 ntBASIC9.77□□□□□ -0.85
LtaP09225 BC026585-202ENSMUST00000119891 1125 ntTSL 1 (best) BASIC9.77□□□□□ -0.85
LtaP09225 Gm12266-201ENSMUST00000120311 962 ntBASIC9.77□□□□□ -0.85
LtaP09225 Eef1akmt2-202ENSMUST00000120425 573 ntTSL 3 BASIC9.77□□□□□ -0.85
LtaP09225 Gm12164-201ENSMUST00000121695 551 ntBASIC9.77□□□□□ -0.85
LtaP09225 Rpl41-203ENSMUST00000176683 437 ntAPPRIS P2 TSL 2 BASIC9.77□□□□□ -0.85
LtaP09225 1110008E08Rik-202ENSMUST00000183621 723 ntBASIC9.77□□□□□ -0.85
LtaP09225 Pmvk-203ENSMUST00000184515 1156 ntTSL 1 (best) BASIC9.77□□□□□ -0.85
LtaP09225 Gm42599-201ENSMUST00000201308 469 ntBASIC9.77□□□□□ -0.85
LtaP09225 Crabp2-201ENSMUST00000005019 931 ntAPPRIS P1 TSL 1 (best) BASIC9.77□□□□□ -0.85
LtaP09225 Cldn17-201ENSMUST00000069549 1172 ntAPPRIS P1 BASIC9.77□□□□□ -0.85
LtaP09225 Rad23a-201ENSMUST00000003911 2074 ntAPPRIS P3 TSL 1 (best) BASIC9.77□□□□□ -0.85
LtaP09225 Ap1g2-211ENSMUST00000170285 2596 ntAPPRIS P1 TSL 5 BASIC9.77□□□□□ -0.85
LtaP09225 Rab11fip5-201ENSMUST00000060837 4035 ntAPPRIS P3 TSL 1 (best) BASIC9.77□□□□□ -0.85
LtaP09225 Gcc1-202ENSMUST00000090511 4650 ntAPPRIS P1 TSL 1 (best) BASIC9.77□□□□□ -0.85
LtaP09225 3200001D21Rik-201ENSMUST00000221603 2283 ntTSL 1 (best) BASIC9.77□□□□□ -0.85
LtaP09225 Flywch1-201ENSMUST00000045517 2798 ntAPPRIS P1 TSL 1 (best) BASIC9.77□□□□□ -0.85
LtaP09225 Zmynd8-203ENSMUST00000099084 5232 ntAPPRIS ALT2 TSL 5 BASIC9.77□□□□□ -0.85
LtaP09225 Fxr1-204ENSMUST00000197694 2129 ntAPPRIS P1 TSL 5 BASIC9.77□□□□□ -0.85
LtaP09225 Ephb6-201ENSMUST00000114732 3762 ntAPPRIS P1 TSL 1 (best) BASIC9.77□□□□□ -0.85
LtaP09225 Clec10a-209ENSMUST00000178945 2332 ntTSL 1 (best) BASIC9.77□□□□□ -0.85
LtaP09225 Slc24a4-201ENSMUST00000079020 2337 ntAPPRIS P2 TSL 1 (best) BASIC9.77□□□□□ -0.85
LtaP09225 Serpinf2-202ENSMUST00000108437 2179 ntAPPRIS P1 TSL 1 (best) BASIC9.77□□□□□ -0.85
LtaP09225 Vamp1-203ENSMUST00000100942 3011 ntAPPRIS ALT1 TSL 1 (best) BASIC9.77□□□□□ -0.85
LtaP09225 Egr1-202ENSMUST00000165033 3036 ntAPPRIS P1 TSL 5 BASIC9.77□□□□□ -0.85
LtaP09225 Ndst1-201ENSMUST00000169273 6070 ntAPPRIS P1 TSL 1 (best) BASIC9.77□□□□□ -0.85
LtaP09225 Ap5b1-201ENSMUST00000096318 3092 ntAPPRIS P1 TSL 1 (best) BASIC9.76□□□□□ -0.85
LtaP09225 Ptprm-203ENSMUST00000224091 3773 ntBASIC9.76□□□□□ -0.85
LtaP09225 6030443J06Rik-202ENSMUST00000181374 1353 ntTSL 1 (best) BASIC9.76□□□□□ -0.85
LtaP09225 AC091458.1-201ENSMUST00000220902 1361 ntBASIC9.76□□□□□ -0.85
LtaP09225 Fam78a-201ENSMUST00000056406 4107 ntAPPRIS P1 TSL 1 (best) BASIC9.76□□□□□ -0.85
LtaP09225 Sesn2-201ENSMUST00000030724 3475 ntAPPRIS P1 TSL 1 (best) BASIC9.76□□□□□ -0.85
LtaP09225 Trim25-203ENSMUST00000107896 5590 ntAPPRIS P2 TSL 1 (best) BASIC9.76□□□□□ -0.85
LtaP09225 Zscan22-201ENSMUST00000055528 2620 ntAPPRIS P1 TSL 1 (best) BASIC9.76□□□□□ -0.85
LtaP09225 Gm37131-201ENSMUST00000192502 1561 ntBASIC9.76□□□□□ -0.85
LtaP09225 Specc1-213ENSMUST00000202179 6676 ntAPPRIS ALT2 TSL 1 (best) BASIC9.76□□□□□ -0.85
LtaP09225 Dlec1-206ENSMUST00000140326 5815 ntAPPRIS ALT2 TSL 5 BASIC9.76□□□□□ -0.85
LtaP09225 Arl8b-201ENSMUST00000032196 4443 ntAPPRIS P1 TSL 1 (best) BASIC9.76□□□□□ -0.85
LtaP09225 Chd3-202ENSMUST00000108661 7261 ntAPPRIS P2 TSL 5 BASIC9.76□□□□□ -0.85
LtaP09225 AC171277.1-201ENSMUST00000216902 1441 ntBASIC9.76□□□□□ -0.85
LtaP09225 Olfr140-202ENSMUST00000111506 3449 ntAPPRIS P1 TSL 2 BASIC9.76□□□□□ -0.85
LtaP09225 Aire-202ENSMUST00000105395 1630 ntTSL 1 (best) BASIC9.76□□□□□ -0.85
LtaP09225 Efna1-202ENSMUST00000118587 1632 ntTSL 1 (best) BASIC9.76□□□□□ -0.85
LtaP09225 Gtf2ird1-224ENSMUST00000202280 3052 ntAPPRIS ALT2 TSL 5 BASIC9.76□□□□□ -0.85
LtaP09225 Stat5a-203ENSMUST00000107357 3605 ntTSL 1 (best) BASIC9.76□□□□□ -0.85
LtaP09225 Stx11-201ENSMUST00000042861 4173 ntAPPRIS P1 TSL 1 (best) BASIC9.76□□□□□ -0.85
LtaP09225 Pcdhgb7-201ENSMUST00000194928 4713 ntAPPRIS P1 TSL 1 (best) BASIC9.76□□□□□ -0.85
LtaP09225 Gm16066-201ENSMUST00000118575 1086 ntTSL 3 BASIC9.76□□□□□ -0.85
LtaP09225 Gm12380-201ENSMUST00000119012 544 ntBASIC9.76□□□□□ -0.85
LtaP09225 Gm10714-201ENSMUST00000131346 874 ntTSL 2 BASIC9.76□□□□□ -0.85
LtaP09225 Gm16099-202ENSMUST00000151873 660 ntTSL 5 BASIC9.76□□□□□ -0.85
LtaP09225 Spata3-210ENSMUST00000153247 884 ntTSL 1 (best) BASIC9.76□□□□□ -0.85
LtaP09225 Rpl41-206ENSMUST00000177163 544 ntAPPRIS P2 TSL 1 (best) BASIC9.76□□□□□ -0.85
LtaP09225 Gm16505-201ENSMUST00000179981 232 ntBASIC9.76□□□□□ -0.85
LtaP09225 9330159M07Rik-202ENSMUST00000180783 1044 ntTSL 1 (best) BASIC9.76□□□□□ -0.85
LtaP09225 Gm5706-201ENSMUST00000181525 993 ntBASIC9.76□□□□□ -0.85
LtaP09225 Zfp229-206ENSMUST00000183192 653 ntTSL 1 (best) BASIC9.76□□□□□ -0.85
LtaP09225 Gm27390-201ENSMUST00000184516 176 ntBASIC9.76□□□□□ -0.85
LtaP09225 Gm7003-201ENSMUST00000195089 312 ntBASIC9.76□□□□□ -0.85
LtaP09225 Gm37466-201ENSMUST00000195692 652 ntBASIC9.76□□□□□ -0.85
LtaP09225 1700018A23Rik-201ENSMUST00000201350 398 ntTSL 1 (best) BASIC9.76□□□□□ -0.85
LtaP09225 Rps4l-202ENSMUST00000204242 789 ntBASIC9.76□□□□□ -0.85
LtaP09225 4930479H17Rik-201ENSMUST00000208824 292 ntTSL 1 (best) BASIC9.76□□□□□ -0.85
LtaP09225 Mob2-203ENSMUST00000209732 977 ntAPPRIS ALT2 TSL 3 BASIC9.76□□□□□ -0.85
LtaP09225 Gm4157-201ENSMUST00000211647 679 ntBASIC9.76□□□□□ -0.85
LtaP09225 AC153929.1-201ENSMUST00000219009 303 ntBASIC9.76□□□□□ -0.85
LtaP09225 CT025694.1-201ENSMUST00000226188 934 ntBASIC9.76□□□□□ -0.85
LtaP09225 Prorsd1-201ENSMUST00000039900 918 ntAPPRIS P1 TSL 1 (best) BASIC9.76□□□□□ -0.85
LtaP09225 S100a1-201ENSMUST00000060738 677 ntAPPRIS P1 TSL 1 (best) BASIC9.76□□□□□ -0.85
LtaP09225 Prr15l-202ENSMUST00000062172 1242 ntAPPRIS P1 TSL 1 (best) BASIC9.76□□□□□ -0.85
LtaP09225 Anxa11-201ENSMUST00000022416 2394 ntAPPRIS P1 TSL 1 (best) BASIC9.76□□□□□ -0.85
LtaP09225 Kcnj11-205ENSMUST00000211674 3142 ntAPPRIS P1 BASIC9.76□□□□□ -0.85
LtaP09225 Pkib-203ENSMUST00000095668 3311 ntTSL 1 (best) BASIC9.76□□□□□ -0.85
LtaP09225 Ncapd2-201ENSMUST00000043848 4629 ntAPPRIS P1 TSL 1 (best) BASIC9.76□□□□□ -0.85
LtaP09225 Slc6a13-201ENSMUST00000064580 2234 ntAPPRIS P1 TSL 1 (best) BASIC9.76□□□□□ -0.85
LtaP09225 Kif2c-201ENSMUST00000065896 2842 ntAPPRIS P3 TSL 1 (best) BASIC9.76□□□□□ -0.85
LtaP09225 Sema3g-201ENSMUST00000090180 4540 ntAPPRIS P1 TSL 1 (best) BASIC9.76□□□□□ -0.85
LtaP09225 Ophn1-201ENSMUST00000033560 7170 ntAPPRIS P1 TSL 1 (best) BASIC9.76□□□□□ -0.85
LtaP09225 Vmn1r193-202ENSMUST00000227457 6429 ntAPPRIS P1 BASIC9.76□□□□□ -0.85
LtaP09225 P2rx7-203ENSMUST00000100737 4936 ntAPPRIS P1 TSL 1 (best) BASIC9.76□□□□□ -0.85
LtaP09225 Grsf1-202ENSMUST00000113234 2286 ntTSL 1 (best) BASIC9.76□□□□□ -0.85
LtaP09225 Mirt1-203ENSMUST00000181539 2259 ntTSL 1 (best) BASIC9.76□□□□□ -0.85
LtaP09225 Acly-201ENSMUST00000007131 4393 ntAPPRIS P3 TSL 1 (best) BASIC9.76□□□□□ -0.85
LtaP09225 P2rx1-201ENSMUST00000021141 2486 ntAPPRIS P1 TSL 1 (best) BASIC9.76□□□□□ -0.85
LtaP09225 Gm28578-201ENSMUST00000187727 2698 ntTSL 1 (best) BASIC9.76□□□□□ -0.85
LtaP09225 Rapgef2-206ENSMUST00000195708 6964 ntAPPRIS P1 TSL 5 BASIC9.76□□□□□ -0.85
LtaP09225 Gm27177-202ENSMUST00000183514 2703 ntBASIC9.76□□□□□ -0.85
LtaP09225 Gm26516-201ENSMUST00000180943 1397 ntTSL 1 (best) BASIC9.75□□□□□ -0.85
LtaP09225 Nanos2-201ENSMUST00000063563 1563 ntAPPRIS P1 BASIC9.75□□□□□ -0.85
Retrieved 100 of 76,532 protein–RNA pairs in 110.8 ms