Protein–RNA interactions for Protein: P09025

Hoxc8, Homeobox protein Hox-C8, mousemouse

Predictions only

Length 242 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxc8P09025 Clpx-201ENSMUST00000015501 2885 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Hoxc8P09025 Adrb3-201ENSMUST00000081438 2795 ntAPPRIS P2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Hoxc8P09025 Wdr25-202ENSMUST00000167816 2657 ntAPPRIS P1 TSL 5 BASIC12.62□□□□□ -0.39
Hoxc8P09025 Dync1i1-204ENSMUST00000115559 2599 ntAPPRIS P3 TSL 1 (best) BASIC12.62□□□□□ -0.39
Hoxc8P09025 Gm38100-202ENSMUST00000201297 1789 ntAPPRIS P2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Hoxc8P09025 Clrn1-203ENSMUST00000072551 1662 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Hoxc8P09025 Zfp639-201ENSMUST00000029203 1458 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Hoxc8P09025 Tomm5-201ENSMUST00000107807 442 ntTSL 2 BASIC12.62□□□□□ -0.39
Hoxc8P09025 Gm13117-201ENSMUST00000120894 691 ntBASIC12.62□□□□□ -0.39
Hoxc8P09025 Mrpl20-202ENSMUST00000130188 442 ntTSL 3 BASIC12.62□□□□□ -0.39
Hoxc8P09025 Gm13267-201ENSMUST00000142787 698 ntTSL 3 BASIC12.62□□□□□ -0.39
Hoxc8P09025 Gm42816-201ENSMUST00000198433 325 ntBASIC12.62□□□□□ -0.39
Hoxc8P09025 Gm45592-201ENSMUST00000209605 1043 ntBASIC12.62□□□□□ -0.39
Hoxc8P09025 Atp5h-201ENSMUST00000043931 625 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Hoxc8P09025 Uqcc1-201ENSMUST00000006036 808 ntTSL 5 BASIC12.62□□□□□ -0.39
Hoxc8P09025 Olfr411-201ENSMUST00000080365 1049 ntAPPRIS P1 BASIC12.62□□□□□ -0.39
Hoxc8P09025 Lhfpl5-201ENSMUST00000080780 1248 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Hoxc8P09025 Snrpg-201ENSMUST00000089558 1055 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Hoxc8P09025 Jpt2-201ENSMUST00000024981 2933 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Hoxc8P09025 Mbnl2-208ENSMUST00000227594 2334 ntAPPRIS P1 BASIC12.62□□□□□ -0.39
Hoxc8P09025 Pbld2-201ENSMUST00000020262 2212 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Hoxc8P09025 Tcf4-243ENSMUST00000202057 1941 ntTSL 5 BASIC12.62□□□□□ -0.39
Hoxc8P09025 Cluh-201ENSMUST00000092915 5379 ntAPPRIS P2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Hoxc8P09025 Xkr6-202ENSMUST00000120820 1702 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Hoxc8P09025 Hectd2-208ENSMUST00000169036 3842 ntAPPRIS ALT1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Hoxc8P09025 Rpl4-201ENSMUST00000034966 1538 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Hoxc8P09025 1200007C13Rik-201ENSMUST00000143649 2455 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Hoxc8P09025 Rbpjl-201ENSMUST00000017151 2456 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Hoxc8P09025 Fam3a-201ENSMUST00000015427 1427 ntAPPRIS P1 TSL 5 BASIC12.62□□□□□ -0.39
Hoxc8P09025 AC108858.2-201ENSMUST00000228186 1425 ntBASIC12.62□□□□□ -0.39
Hoxc8P09025 Chac2-202ENSMUST00000101394 1315 ntAPPRIS P3 TSL 1 (best) BASIC12.62□□□□□ -0.39
Hoxc8P09025 Unc5b-203ENSMUST00000218637 3653 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Hoxc8P09025 Ube3a-201ENSMUST00000107537 4911 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Hoxc8P09025 Phyhipl-201ENSMUST00000046513 2877 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Hoxc8P09025 Cpne4-201ENSMUST00000057742 3959 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Hoxc8P09025 Alg12-204ENSMUST00000162183 2130 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Hoxc8P09025 Mark2-215ENSMUST00000168872 2124 ntAPPRIS ALT2 TSL 5 BASIC12.61□□□□□ -0.39
Hoxc8P09025 Tbc1d22a-201ENSMUST00000063414 3229 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Hoxc8P09025 Scarb2-201ENSMUST00000031377 4698 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Hoxc8P09025 Pik3r1-201ENSMUST00000035532 2923 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Hoxc8P09025 Bak1-202ENSMUST00000078691 2387 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Hoxc8P09025 Pparg-204ENSMUST00000203732 1826 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Hoxc8P09025 Ighv7-2-201ENSMUST00000103462 354 ntAPPRIS ALT2 BASIC12.61□□□□□ -0.39
Hoxc8P09025 Gm15528-201ENSMUST00000117821 864 ntBASIC12.61□□□□□ -0.39
Hoxc8P09025 Rhox3d-ps-201ENSMUST00000119181 825 ntBASIC12.61□□□□□ -0.39
Hoxc8P09025 Gm15507-201ENSMUST00000133523 592 ntTSL 5 BASIC12.61□□□□□ -0.39
Hoxc8P09025 Itpr3os-201ENSMUST00000143605 794 ntTSL 2 BASIC12.61□□□□□ -0.39
Hoxc8P09025 9330179D12Rik-201ENSMUST00000180569 1105 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Hoxc8P09025 Gm43552-201ENSMUST00000196121 365 ntAPPRIS P1 TSL 3 BASIC12.61□□□□□ -0.39
Hoxc8P09025 Gm7972-202ENSMUST00000208453 505 ntTSL 3 BASIC12.61□□□□□ -0.39
Hoxc8P09025 Gm5996-201ENSMUST00000211110 718 ntBASIC12.61□□□□□ -0.39
Hoxc8P09025 Gm9508-201ENSMUST00000220084 693 ntAPPRIS P1 BASIC12.61□□□□□ -0.39
Hoxc8P09025 Gm36074-201ENSMUST00000221383 591 ntTSL 5 BASIC12.61□□□□□ -0.39
Hoxc8P09025 CT009527.1-201ENSMUST00000224205 339 ntBASIC12.61□□□□□ -0.39
Hoxc8P09025 Nmur1-201ENSMUST00000027440 1218 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Hoxc8P09025 1700001K19Rik-201ENSMUST00000070659 955 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Hoxc8P09025 Gm5805-201ENSMUST00000072779 456 ntBASIC12.61□□□□□ -0.39
Hoxc8P09025 Gm16380-201ENSMUST00000077997 478 ntBASIC12.61□□□□□ -0.39
Hoxc8P09025 Tnn-201ENSMUST00000039178 5817 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Hoxc8P09025 Zfp365-201ENSMUST00000064656 4259 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Hoxc8P09025 Tpra1-218ENSMUST00000203185 1718 ntAPPRIS P1 TSL 5 BASIC12.61□□□□□ -0.39
Hoxc8P09025 Wnt3-201ENSMUST00000000127 3076 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Hoxc8P09025 Slc29a1-213ENSMUST00000167692 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Hoxc8P09025 Slc1a2-203ENSMUST00000111212 1957 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Hoxc8P09025 Pdlim2-201ENSMUST00000022681 1523 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Hoxc8P09025 Tmc4-201ENSMUST00000038743 2310 ntAPPRIS P2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Hoxc8P09025 Ablim1-211ENSMUST00000111555 2562 ntAPPRIS ALT2 TSL 5 BASIC12.61□□□□□ -0.39
Hoxc8P09025 Ifi47-202ENSMUST00000109202 1773 ntAPPRIS P1 TSL 2 BASIC12.61□□□□□ -0.39
Hoxc8P09025 Bckdk-202ENSMUST00000124533 1792 ntTSL 3 BASIC12.61□□□□□ -0.39
Hoxc8P09025 Gm45428-201ENSMUST00000209619 1789 ntBASIC12.61□□□□□ -0.39
Hoxc8P09025 Rbm12b1-201ENSMUST00000050069 2949 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Hoxc8P09025 Kdm5c-202ENSMUST00000112584 5900 ntAPPRIS ALT2 TSL 5 BASIC12.61□□□□□ -0.39
Hoxc8P09025 Arid4b-201ENSMUST00000039538 5844 ntTSL 5 BASIC12.61□□□□□ -0.39
Hoxc8P09025 Socs7-201ENSMUST00000045540 7015 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Hoxc8P09025 Adamtsl3-204ENSMUST00000173828 2292 ntTSL 5 BASIC12.6□□□□□ -0.39
Hoxc8P09025 Srrt-209ENSMUST00000197466 2972 ntAPPRIS ALT2 TSL 5 BASIC12.6□□□□□ -0.39
Hoxc8P09025 Srrt-212ENSMUST00000199243 2988 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Hoxc8P09025 Sim2-201ENSMUST00000072182 3670 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Hoxc8P09025 Egr2-202ENSMUST00000105438 2864 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Hoxc8P09025 Dnaic2-201ENSMUST00000069325 2874 ntAPPRIS P1 TSL 5 BASIC12.6□□□□□ -0.39
Hoxc8P09025 Acbd5-208ENSMUST00000226571 3802 ntAPPRIS ALT2 BASIC12.6□□□□□ -0.39
Hoxc8P09025 A530032D15Rik-201ENSMUST00000160792 1492 ntAPPRIS P2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Hoxc8P09025 Xpot-201ENSMUST00000039810 5992 ntTSL 5 BASIC12.6□□□□□ -0.39
Hoxc8P09025 Padi6-201ENSMUST00000038749 2333 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Hoxc8P09025 Gm13814-201ENSMUST00000141341 3077 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Hoxc8P09025 Kcnt1-204ENSMUST00000114176 4166 ntAPPRIS ALT2 TSL 5 BASIC12.6□□□□□ -0.39
Hoxc8P09025 Rhox3c-202ENSMUST00000115189 648 ntAPPRIS P1 TSL 5 BASIC12.6□□□□□ -0.39
Hoxc8P09025 Rbmx2-ps-201ENSMUST00000119377 930 ntBASIC12.6□□□□□ -0.39
Hoxc8P09025 Taar8c-201ENSMUST00000170267 1035 ntAPPRIS P1 BASIC12.6□□□□□ -0.39
Hoxc8P09025 Rhox3a2-204ENSMUST00000184565 823 ntAPPRIS P1 TSL 5 BASIC12.6□□□□□ -0.39
Hoxc8P09025 Gm28262-201ENSMUST00000185463 477 ntTSL 5 BASIC12.6□□□□□ -0.39
Hoxc8P09025 Crcp-204ENSMUST00000202163 931 ntTSL 2 BASIC12.6□□□□□ -0.39
Hoxc8P09025 Gm18065-201ENSMUST00000221395 526 ntBASIC12.6□□□□□ -0.39
Hoxc8P09025 AC129308.3-201ENSMUST00000225652 524 ntBASIC12.6□□□□□ -0.39
Hoxc8P09025 Gbgt1-201ENSMUST00000028172 1084 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Hoxc8P09025 1600002K03Rik-201ENSMUST00000041882 678 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Hoxc8P09025 Taar8a-201ENSMUST00000051133 1035 ntAPPRIS P1 BASIC12.6□□□□□ -0.39
Hoxc8P09025 3100002H09Rik-201ENSMUST00000053604 873 ntAPPRIS P1 BASIC12.6□□□□□ -0.39
Hoxc8P09025 Rps18-ps3-201ENSMUST00000080443 456 ntBASIC12.6□□□□□ -0.39
Hoxc8P09025 Rhox3e-201ENSMUST00000081327 648 ntAPPRIS P1 TSL 5 BASIC12.6□□□□□ -0.39
Retrieved 100 of 76,532 protein–RNA pairs in 43.5 ms