Protein–RNA interactions for Protein: P02831

Hoxa3, Homeobox protein Hox-A3, mousemouse

Predictions only

Length 443 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxa3P02831 Pcsk7-209ENSMUST00000216672 3599 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
Hoxa3P02831 Rnf165-202ENSMUST00000182024 4309 ntTSL 5 BASIC10.03□□□□□ -0.8
Hoxa3P02831 Gm37014-201ENSMUST00000194723 2253 ntBASIC10.03□□□□□ -0.8
Hoxa3P02831 Umod-206ENSMUST00000209095 2571 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
Hoxa3P02831 Slc52a2-201ENSMUST00000023220 2700 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
Hoxa3P02831 Trpc2-201ENSMUST00000124189 2874 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
Hoxa3P02831 Dnaic2-201ENSMUST00000069325 2874 ntAPPRIS P1 TSL 5 BASIC10.03□□□□□ -0.8
Hoxa3P02831 Tmem115-201ENSMUST00000010189 2194 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
Hoxa3P02831 Prkag3-202ENSMUST00000113672 2003 ntTSL 1 (best) BASIC10.03□□□□□ -0.8
Hoxa3P02831 Rpl36-ps10-201ENSMUST00000117431 216 ntBASIC10.03□□□□□ -0.8
Hoxa3P02831 Gm15515-201ENSMUST00000117827 822 ntBASIC10.03□□□□□ -0.8
Hoxa3P02831 Mdk-ps1-201ENSMUST00000119782 321 ntBASIC10.03□□□□□ -0.8
Hoxa3P02831 5730416F02Rik-201ENSMUST00000120648 812 ntBASIC10.03□□□□□ -0.8
Hoxa3P02831 Gm15891-201ENSMUST00000127307 611 ntTSL 5 BASIC10.03□□□□□ -0.8
Hoxa3P02831 Gm11772-201ENSMUST00000136542 532 ntTSL 1 (best) BASIC10.03□□□□□ -0.8
Hoxa3P02831 Tmem74bos-201ENSMUST00000137422 390 ntTSL 3 BASIC10.03□□□□□ -0.8
Hoxa3P02831 1700121N20Rik-201ENSMUST00000167922 1027 ntTSL 1 (best) BASIC10.03□□□□□ -0.8
Hoxa3P02831 Gm33222-201ENSMUST00000193725 654 ntTSL 3 BASIC10.03□□□□□ -0.8
Hoxa3P02831 Gm29707-202ENSMUST00000198744 659 ntTSL 3 BASIC10.03□□□□□ -0.8
Hoxa3P02831 Gja5-203ENSMUST00000199597 3668 ntTSL 1 (best) BASIC10.03□□□□□ -0.8
Hoxa3P02831 Gm44086-201ENSMUST00000203251 2349 ntBASIC10.03□□□□□ -0.8
Hoxa3P02831 Gm44124-201ENSMUST00000204159 472 ntBASIC10.03□□□□□ -0.8
Hoxa3P02831 Gm7848-201ENSMUST00000210739 718 ntBASIC10.03□□□□□ -0.8
Hoxa3P02831 AC160052.1-201ENSMUST00000213173 1248 ntTSL 5 BASIC10.03□□□□□ -0.8
Hoxa3P02831 AC156504.2-201ENSMUST00000213800 711 ntTSL 1 (best) BASIC10.03□□□□□ -0.8
Hoxa3P02831 AC153974.2-201ENSMUST00000218577 1025 ntBASIC10.03□□□□□ -0.8
Hoxa3P02831 AC147241.1-201ENSMUST00000222173 785 ntTSL 3 BASIC10.03□□□□□ -0.8
Hoxa3P02831 Pebp4-201ENSMUST00000022678 1079 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
Hoxa3P02831 Thegl-201ENSMUST00000031161 1719 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
Hoxa3P02831 Mfsd13b-201ENSMUST00000033166 1883 ntAPPRIS P2 TSL 1 (best) BASIC10.03□□□□□ -0.8
Hoxa3P02831 4930569F06Rik-201ENSMUST00000036821 433 ntBASIC10.03□□□□□ -0.8
Hoxa3P02831 Abhd14a-201ENSMUST00000048685 1256 ntAPPRIS P1 TSL 5 BASIC10.03□□□□□ -0.8
Hoxa3P02831 Gm5455-201ENSMUST00000058710 715 ntBASIC10.03□□□□□ -0.8
Hoxa3P02831 S100a1-201ENSMUST00000060738 677 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
Hoxa3P02831 Gpr17-201ENSMUST00000064016 5195 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
Hoxa3P02831 Gm10604-201ENSMUST00000098260 1706 ntAPPRIS P1 BASIC10.03□□□□□ -0.8
Hoxa3P02831 Rps6ka6-202ENSMUST00000082034 4170 ntAPPRIS P2 TSL 5 BASIC10.03□□□□□ -0.8
Hoxa3P02831 Cul5-201ENSMUST00000034529 3585 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
Hoxa3P02831 Pnma3-201ENSMUST00000060418 3405 ntAPPRIS P1 BASIC10.03□□□□□ -0.8
Hoxa3P02831 Ddx10-201ENSMUST00000065630 3128 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
Hoxa3P02831 Anxa11-201ENSMUST00000022416 2394 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
Hoxa3P02831 Dsc2-202ENSMUST00000075214 4508 ntAPPRIS ALT2 TSL 5 BASIC10.03□□□□□ -0.8
Hoxa3P02831 Wasf2-202ENSMUST00000105912 2236 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
Hoxa3P02831 Tor1aip1-202ENSMUST00000097527 4234 ntAPPRIS ALT2 TSL 1 (best) BASIC10.03□□□□□ -0.8
Hoxa3P02831 Gm44260-201ENSMUST00000204946 2094 ntBASIC10.03□□□□□ -0.8
Hoxa3P02831 Celsr3-207ENSMUST00000213524 9930 ntAPPRIS ALT2 TSL 1 (best) BASIC10.03□□□□□ -0.8
Hoxa3P02831 Exosc1-202ENSMUST00000112123 1499 ntTSL 1 (best) BASIC10.03□□□□□ -0.8
Hoxa3P02831 Gm5525-201ENSMUST00000190438 1312 ntBASIC10.03□□□□□ -0.8
Hoxa3P02831 Exog-201ENSMUST00000035094 3832 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
Hoxa3P02831 1700001L05Rik-201ENSMUST00000100370 2270 ntTSL 1 (best) BASIC10.03□□□□□ -0.8
Hoxa3P02831 Mirt1-203ENSMUST00000181539 2259 ntTSL 1 (best) BASIC10.03□□□□□ -0.8
Hoxa3P02831 Ncoa3-202ENSMUST00000109252 5757 ntAPPRIS ALT2 TSL 5 BASIC10.03□□□□□ -0.8
Hoxa3P02831 Zfp957-202ENSMUST00000161649 2751 ntAPPRIS P1 TSL 5 BASIC10.03□□□□□ -0.8
Hoxa3P02831 Frmpd2-203ENSMUST00000208577 5192 ntAPPRIS P1 TSL 5 BASIC10.03□□□□□ -0.8
Hoxa3P02831 Rita1-207ENSMUST00000177800 1668 ntAPPRIS P1 TSL 5 BASIC10.02□□□□□ -0.8
Hoxa3P02831 Lsp1-201ENSMUST00000018963 1695 ntAPPRIS ALT2 TSL 1 (best) BASIC10.02□□□□□ -0.8
Hoxa3P02831 Gtf2ird1-207ENSMUST00000111245 3299 ntAPPRIS ALT2 TSL 1 (best) BASIC10.02□□□□□ -0.8
Hoxa3P02831 Apopt1-203ENSMUST00000162316 3107 ntTSL 1 (best) BASIC10.02□□□□□ -0.8
Hoxa3P02831 Klhl14-202ENSMUST00000122333 4423 ntAPPRIS P1 TSL 5 BASIC10.02□□□□□ -0.8
Hoxa3P02831 Pak6-201ENSMUST00000099557 4411 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.8
Hoxa3P02831 Gm14243-201ENSMUST00000131401 2172 ntTSL 2 BASIC10.02□□□□□ -0.8
Hoxa3P02831 Batf2-201ENSMUST00000045042 1391 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.8
Hoxa3P02831 Polm-202ENSMUST00000109837 2697 ntTSL 5 BASIC10.02□□□□□ -0.8
Hoxa3P02831 Pcdha2-202ENSMUST00000195590 4645 ntAPPRIS ALT2 TSL 1 (best) BASIC10.02□□□□□ -0.8
Hoxa3P02831 Ndc1-204ENSMUST00000139560 4584 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.81
Hoxa3P02831 Mrap2-201ENSMUST00000049457 1931 ntAPPRIS P1 TSL 3 BASIC10.02□□□□□ -0.81
Hoxa3P02831 Gm36855-203ENSMUST00000216660 1406 ntTSL 5 BASIC10.02□□□□□ -0.81
Hoxa3P02831 Dnaic2-202ENSMUST00000092469 2799 ntAPPRIS P1 TSL 5 BASIC10.02□□□□□ -0.81
Hoxa3P02831 Lipe-201ENSMUST00000003207 3613 ntAPPRIS P4 TSL 1 (best) BASIC10.02□□□□□ -0.81
Hoxa3P02831 Ighv1-80-201ENSMUST00000103547 351 ntAPPRIS P1 BASIC10.02□□□□□ -0.81
Hoxa3P02831 Lamr1-ps1-201ENSMUST00000119759 874 ntBASIC10.02□□□□□ -0.81
Hoxa3P02831 Gm7722-201ENSMUST00000120646 741 ntBASIC10.02□□□□□ -0.81
Hoxa3P02831 Odf4-202ENSMUST00000125134 646 ntTSL 3 BASIC10.02□□□□□ -0.81
Hoxa3P02831 Gm10714-201ENSMUST00000131346 874 ntTSL 2 BASIC10.02□□□□□ -0.81
Hoxa3P02831 Gm12589-201ENSMUST00000153767 638 ntTSL 1 (best) BASIC10.02□□□□□ -0.81
Hoxa3P02831 Rprl1-201ENSMUST00000158050 327 ntBASIC10.02□□□□□ -0.81
Hoxa3P02831 Tmem40-205ENSMUST00000166254 811 ntAPPRIS P3 TSL 5 BASIC10.02□□□□□ -0.81
Hoxa3P02831 Gm18734-201ENSMUST00000172937 808 ntBASIC10.02□□□□□ -0.81
Hoxa3P02831 Gm28071-201ENSMUST00000190355 478 ntBASIC10.02□□□□□ -0.81
Hoxa3P02831 Gm39460-201ENSMUST00000215728 1266 ntTSL 5 BASIC10.02□□□□□ -0.81
Hoxa3P02831 AC153954.1-201ENSMUST00000216959 255 ntBASIC10.02□□□□□ -0.81
Hoxa3P02831 Mcpt1-201ENSMUST00000022836 1014 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.81
Hoxa3P02831 Csnk2b-201ENSMUST00000025246 961 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.81
Hoxa3P02831 Ly6g5c-201ENSMUST00000037849 509 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.81
Hoxa3P02831 Olfr686-201ENSMUST00000050157 1018 ntAPPRIS P1 BASIC10.02□□□□□ -0.81
Hoxa3P02831 Olfr117-201ENSMUST00000073636 954 ntAPPRIS P1 BASIC10.02□□□□□ -0.81
Hoxa3P02831 Ifi27-205ENSMUST00000085065 977 ntAPPRIS ALT2 TSL 1 (best) BASIC10.02□□□□□ -0.81
Hoxa3P02831 Olfr130-201ENSMUST00000087129 954 ntAPPRIS P1 BASIC10.02□□□□□ -0.81
Hoxa3P02831 Chd5-201ENSMUST00000005175 9122 ntAPPRIS ALT2 TSL 5 BASIC10.02□□□□□ -0.81
Hoxa3P02831 Slc24a4-201ENSMUST00000079020 2337 ntAPPRIS P2 TSL 1 (best) BASIC10.02□□□□□ -0.81
Hoxa3P02831 Ptpn2-203ENSMUST00000122412 2667 ntAPPRIS ALT2 TSL 1 (best) BASIC10.02□□□□□ -0.81
Hoxa3P02831 Cyb561d1-201ENSMUST00000065664 4058 ntAPPRIS ALT1 TSL 1 (best) BASIC10.02□□□□□ -0.81
Hoxa3P02831 Zfp28-201ENSMUST00000081022 4447 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.81
Hoxa3P02831 Setx-201ENSMUST00000061578 10970 ntAPPRIS P1 TSL 5 BASIC10.02□□□□□ -0.81
Hoxa3P02831 Bcl11a-201ENSMUST00000000881 3061 ntTSL 1 (best) BASIC10.02□□□□□ -0.81
Hoxa3P02831 Zcchc18-202ENSMUST00000101227 2045 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.81
Hoxa3P02831 Luc7l-201ENSMUST00000025023 1686 ntAPPRIS ALT2 TSL 1 (best) BASIC10.02□□□□□ -0.81
Hoxa3P02831 Prc1-206ENSMUST00000173824 2912 ntTSL 1 (best) BASIC10.02□□□□□ -0.81
Hoxa3P02831 Pde6c-201ENSMUST00000025956 2586 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.81
Hoxa3P02831 Tsga10-202ENSMUST00000088072 3837 ntAPPRIS ALT2 TSL 1 (best) BASIC10.02□□□□□ -0.81
Retrieved 100 of 76,532 protein–RNA pairs in 36.1 ms