Protein–RNA interactions for Protein: P01849

Tcra, T-cell receptor alpha chain C region, mousemouse

Predictions only

Length 138 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TcraP01849 Gm24231-201ENSMUST00000104315 133 ntBASIC8.7□□□□□ -1.02
TcraP01849 Gm12928-201ENSMUST00000117115 573 ntBASIC8.7□□□□□ -1.02
TcraP01849 Gm11724-201ENSMUST00000125577 472 ntTSL 2 BASIC8.7□□□□□ -1.02
TcraP01849 Gm14224-201ENSMUST00000147187 864 ntTSL 3 BASIC8.7□□□□□ -1.02
TcraP01849 Spata3-210ENSMUST00000153247 884 ntTSL 1 (best) BASIC8.7□□□□□ -1.02
TcraP01849 Stx5a-219ENSMUST00000177373 995 ntTSL 5 BASIC8.7□□□□□ -1.02
TcraP01849 Gm34086-201ENSMUST00000196486 743 ntTSL 3 BASIC8.7□□□□□ -1.02
TcraP01849 Gm18018-201ENSMUST00000198273 408 ntBASIC8.7□□□□□ -1.02
TcraP01849 Gm38671-201ENSMUST00000200573 130 ntBASIC8.7□□□□□ -1.02
TcraP01849 Gm44882-201ENSMUST00000205702 802 ntBASIC8.7□□□□□ -1.02
TcraP01849 Apoa5-203ENSMUST00000213878 727 ntTSL 3 BASIC8.7□□□□□ -1.02
TcraP01849 AC166051.1-201ENSMUST00000214313 210 ntBASIC8.7□□□□□ -1.02
TcraP01849 Timm9-206ENSMUST00000221367 836 ntAPPRIS P1 TSL 5 BASIC8.7□□□□□ -1.02
TcraP01849 Tspan8-201ENSMUST00000035563 1244 ntAPPRIS P1 TSL 1 (best) BASIC8.7□□□□□ -1.02
TcraP01849 Ndufa4l2-201ENSMUST00000035735 934 ntAPPRIS P1 TSL 1 (best) BASIC8.7□□□□□ -1.02
TcraP01849 Atpif1-201ENSMUST00000067496 539 ntAPPRIS P1 TSL 1 (best) BASIC8.7□□□□□ -1.02
TcraP01849 Lrtm2-204ENSMUST00000168793 3407 ntAPPRIS P1 TSL 5 BASIC8.7□□□□□ -1.02
TcraP01849 Pdp2-201ENSMUST00000059588 5692 ntAPPRIS P1 TSL 1 (best) BASIC8.7□□□□□ -1.02
TcraP01849 Klk8-201ENSMUST00000085461 1322 ntAPPRIS P1 TSL 1 (best) BASIC8.7□□□□□ -1.02
TcraP01849 Plcd4-204ENSMUST00000113747 2720 ntAPPRIS ALT2 TSL 1 (best) BASIC8.7□□□□□ -1.02
TcraP01849 Cuzd1-201ENSMUST00000046611 2256 ntAPPRIS P1 TSL 1 (best) BASIC8.7□□□□□ -1.02
TcraP01849 Hyal3-202ENSMUST00000148440 1380 ntAPPRIS P1 TSL 5 BASIC8.7□□□□□ -1.02
TcraP01849 Gm38049-201ENSMUST00000195698 1372 ntBASIC8.7□□□□□ -1.02
TcraP01849 Pcdhgb8-201ENSMUST00000195764 4615 ntAPPRIS ALT2 TSL 1 (best) BASIC8.7□□□□□ -1.02
TcraP01849 Irf9-205ENSMUST00000138037 2343 ntAPPRIS ALT2 TSL 1 (best) BASIC8.7□□□□□ -1.02
TcraP01849 Tceal8-204ENSMUST00000163584 2358 ntAPPRIS P1 TSL 3 BASIC8.7□□□□□ -1.02
TcraP01849 C230024C17Rik-201ENSMUST00000190663 3337 ntTSL 1 (best) BASIC8.7□□□□□ -1.02
TcraP01849 BC024139-202ENSMUST00000089654 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC8.7□□□□□ -1.02
TcraP01849 Nrip3-201ENSMUST00000033331 3910 ntAPPRIS P1 TSL 1 (best) BASIC8.7□□□□□ -1.02
TcraP01849 Spesp1-201ENSMUST00000056949 3042 ntAPPRIS P1 TSL 1 (best) BASIC8.7□□□□□ -1.02
TcraP01849 Prok1-202ENSMUST00000197758 3063 ntTSL 1 (best) BASIC8.69□□□□□ -1.02
TcraP01849 Nuak2-202ENSMUST00000082125 3107 ntAPPRIS P3 TSL 1 (best) BASIC8.69□□□□□ -1.02
TcraP01849 Cacna1e-207ENSMUST00000211821 6765 ntAPPRIS ALT2 TSL 5 BASIC8.69□□□□□ -1.02
TcraP01849 Duoxa2-201ENSMUST00000028656 1592 ntAPPRIS P1 TSL 1 (best) BASIC8.69□□□□□ -1.02
TcraP01849 Xpnpep1-211ENSMUST00000183274 2120 ntTSL 1 (best) BASIC8.69□□□□□ -1.02
TcraP01849 Gm13075-202ENSMUST00000149247 1621 ntTSL 5 BASIC8.69□□□□□ -1.02
TcraP01849 Mettl17-201ENSMUST00000047899 1623 ntAPPRIS P2 TSL 1 (best) BASIC8.69□□□□□ -1.02
TcraP01849 Phyhd1-212ENSMUST00000154647 1678 ntAPPRIS P1 TSL 1 (best) BASIC8.69□□□□□ -1.02
TcraP01849 Styxl1-208ENSMUST00000178515 1651 ntTSL 1 (best) BASIC8.69□□□□□ -1.02
TcraP01849 Ces2d-ps-201ENSMUST00000043209 1656 ntBASIC8.69□□□□□ -1.02
TcraP01849 Aldoc-202ENSMUST00000102478 1700 ntAPPRIS P1 TSL 1 (best) BASIC8.69□□□□□ -1.02
TcraP01849 Clip1-203ENSMUST00000111561 5883 ntAPPRIS ALT2 TSL 5 BASIC8.69□□□□□ -1.02
TcraP01849 Styx-205ENSMUST00000226873 12974 ntAPPRIS P1 BASIC8.69□□□□□ -1.02
TcraP01849 Pla2g2f-201ENSMUST00000030526 2465 ntAPPRIS P1 TSL 1 (best) BASIC8.69□□□□□ -1.02
TcraP01849 Cct5-201ENSMUST00000022842 1853 ntAPPRIS P1 TSL 1 (best) BASIC8.69□□□□□ -1.02
TcraP01849 Myo18a-208ENSMUST00000108375 7513 ntAPPRIS ALT2 TSL 5 BASIC8.69□□□□□ -1.02
TcraP01849 Mafg-203ENSMUST00000106181 840 ntAPPRIS P1 TSL 3 BASIC8.69□□□□□ -1.02
TcraP01849 Birc7-201ENSMUST00000108875 1178 ntAPPRIS P1 TSL 5 BASIC8.69□□□□□ -1.02
TcraP01849 Gm13834-201ENSMUST00000123757 137 ntTSL 3 BASIC8.69□□□□□ -1.02
TcraP01849 Gm15755-201ENSMUST00000133698 659 ntTSL 3 BASIC8.69□□□□□ -1.02
TcraP01849 Gm15479-201ENSMUST00000139309 1133 ntTSL 1 (best) BASIC8.69□□□□□ -1.02
TcraP01849 Gm16000-201ENSMUST00000146657 447 ntTSL 2 BASIC8.69□□□□□ -1.02
TcraP01849 Gm23363-201ENSMUST00000175024 79 ntBASIC8.69□□□□□ -1.02
TcraP01849 Psmc3ip-201ENSMUST00000019447 1291 ntAPPRIS P1 TSL 1 (best) BASIC8.69□□□□□ -1.02
TcraP01849 Timm13-201ENSMUST00000020440 1225 ntAPPRIS P1 TSL 1 (best) BASIC8.69□□□□□ -1.02
TcraP01849 Gm45668-201ENSMUST00000211271 493 ntBASIC8.69□□□□□ -1.02
TcraP01849 AC238811.3-201ENSMUST00000225422 709 ntBASIC8.69□□□□□ -1.02
TcraP01849 AC155252.1-201ENSMUST00000226462 1208 ntBASIC8.69□□□□□ -1.02
TcraP01849 Rsph1-201ENSMUST00000024832 1164 ntAPPRIS P1 TSL 1 (best) BASIC8.69□□□□□ -1.02
TcraP01849 Txn1-201ENSMUST00000030051 1051 ntAPPRIS P1 TSL 1 (best) BASIC8.69□□□□□ -1.02
TcraP01849 Fthl17c-201ENSMUST00000075792 850 ntAPPRIS P1 BASIC8.69□□□□□ -1.02
TcraP01849 Emd-203ENSMUST00000096424 896 ntTSL 5 BASIC8.69□□□□□ -1.02
TcraP01849 Lrrc57-203ENSMUST00000102498 1901 ntAPPRIS P1 TSL 5 BASIC8.69□□□□□ -1.02
TcraP01849 Cdh15-201ENSMUST00000034443 3251 ntAPPRIS P1 TSL 1 (best) BASIC8.69□□□□□ -1.02
TcraP01849 Akap12-202ENSMUST00000215696 5931 ntAPPRIS ALT2 TSL 1 (best) BASIC8.69□□□□□ -1.02
TcraP01849 Adcyap1r1-208ENSMUST00000172084 1344 ntAPPRIS ALT2 TSL 5 BASIC8.69□□□□□ -1.02
TcraP01849 Prss22-201ENSMUST00000041649 1323 ntAPPRIS P1 TSL 1 (best) BASIC8.69□□□□□ -1.02
TcraP01849 Krt40-201ENSMUST00000074253 1320 ntAPPRIS P1 TSL 1 (best) BASIC8.69□□□□□ -1.02
TcraP01849 Colec12-201ENSMUST00000040069 3322 ntAPPRIS P1 TSL 1 (best) BASIC8.69□□□□□ -1.02
TcraP01849 Scn5a-203ENSMUST00000120420 7536 ntAPPRIS ALT1 TSL 5 BASIC8.69□□□□□ -1.02
TcraP01849 Wfdc1-201ENSMUST00000024107 1371 ntAPPRIS P2 TSL 1 (best) BASIC8.69□□□□□ -1.02
TcraP01849 Oasl1-201ENSMUST00000031540 2125 ntAPPRIS P1 TSL 1 (best) BASIC8.69□□□□□ -1.02
TcraP01849 Gm9816-201ENSMUST00000122292 1414 ntBASIC8.69□□□□□ -1.02
TcraP01849 Clec4g-201ENSMUST00000058040 1441 ntTSL 5 BASIC8.69□□□□□ -1.02
TcraP01849 Rhbdf2-202ENSMUST00000103029 3593 ntAPPRIS P1 TSL 1 (best) BASIC8.69□□□□□ -1.02
TcraP01849 Sell-201ENSMUST00000027871 2199 ntAPPRIS P2 TSL 1 (best) BASIC8.69□□□□□ -1.02
TcraP01849 Ctnnal1-201ENSMUST00000045142 3664 ntAPPRIS P1 TSL 1 (best) BASIC8.69□□□□□ -1.02
TcraP01849 Il1rap-202ENSMUST00000096129 4438 ntAPPRIS ALT2 TSL 1 (best) BASIC8.69□□□□□ -1.02
TcraP01849 Abhd6-202ENSMUST00000166497 2226 ntAPPRIS P1 TSL 1 (best) BASIC8.69□□□□□ -1.02
TcraP01849 Kcnk18-201ENSMUST00000065204 3032 ntAPPRIS P1 TSL 1 (best) BASIC8.69□□□□□ -1.02
TcraP01849 Oprm1-214ENSMUST00000105605 1503 ntTSL 1 (best) BASIC8.69□□□□□ -1.02
TcraP01849 Oprm1-201ENSMUST00000000783 1500 ntTSL 1 (best) BASIC8.69□□□□□ -1.02
TcraP01849 Angptl4-201ENSMUST00000002360 3053 ntAPPRIS P1 TSL 1 (best) BASIC8.69□□□□□ -1.02
TcraP01849 Kat7-203ENSMUST00000103159 3248 ntTSL 1 (best) BASIC8.69□□□□□ -1.02
TcraP01849 Rasgrp4-208ENSMUST00000161522 3242 ntTSL 5 BASIC8.69□□□□□ -1.02
TcraP01849 Hsd3b1-201ENSMUST00000029465 1663 ntAPPRIS P1 TSL 2 BASIC8.69□□□□□ -1.02
TcraP01849 Myh4-201ENSMUST00000018632 6016 ntAPPRIS P1 TSL 5 BASIC8.68□□□□□ -1.02
TcraP01849 Sh2d5-201ENSMUST00000105823 3529 ntAPPRIS P1 TSL 1 (best) BASIC8.68□□□□□ -1.02
TcraP01849 Tmem134-216ENSMUST00000171743 3701 ntTSL 5 BASIC8.68□□□□□ -1.02
TcraP01849 Limd1-201ENSMUST00000026269 4848 ntAPPRIS P1 TSL 1 (best) BASIC8.68□□□□□ -1.02
TcraP01849 Cnga4-202ENSMUST00000210344 1977 ntTSL 1 (best) BASIC8.68□□□□□ -1.02
TcraP01849 Wipf1-203ENSMUST00000102680 4032 ntAPPRIS P1 TSL 1 (best) BASIC8.68□□□□□ -1.02
TcraP01849 Lhx9-204ENSMUST00000112026 2065 ntAPPRIS P2 TSL 1 (best) BASIC8.68□□□□□ -1.02
TcraP01849 Pigc-205ENSMUST00000193784 4207 ntAPPRIS P1 BASIC8.68□□□□□ -1.02
TcraP01849 Slc23a2-201ENSMUST00000028815 6364 ntAPPRIS P1 TSL 1 (best) BASIC8.68□□□□□ -1.02
TcraP01849 Scaf1-201ENSMUST00000085383 4293 ntAPPRIS P1 TSL 1 (best) BASIC8.68□□□□□ -1.02
TcraP01849 Myo18a-223ENSMUST00000169105 6475 ntAPPRIS ALT2 TSL 1 (best) BASIC8.68□□□□□ -1.02
TcraP01849 Sipa1l3-215ENSMUST00000183096 7713 ntAPPRIS P1 TSL 5 BASIC8.68□□□□□ -1.02
TcraP01849 Sipa1l3-201ENSMUST00000085809 7713 ntAPPRIS P1 TSL 5 BASIC8.68□□□□□ -1.02
TcraP01849 Vars2-201ENSMUST00000043674 4425 ntAPPRIS P1 TSL 1 (best) BASIC8.68□□□□□ -1.02
Retrieved 100 of 76,532 protein–RNA pairs in 36 ms